Dynamic passive dosing for studying the biotransformation of hydrophobic organic chemicals: Microbial degradation as an example

Environmental Science and Technology

Volumn 46, Issue 9, 2012, Pages 4852-4860

  Smith, Kilian E C ^a   Rein, Arno ^b   Trapp, Stefan ^b   Mayer, Philipp ^a   Karlson, Ulrich Gosewinkel ^a  

^a AARHUS UNIVERSITY   (Denmark)

^b TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

AQUEOUS ENVIRONMENT; BIODEGRADATION KINETICS; BIOTRANSFORMATION KINETICS; CONCENTRATION RANGES; COSOLVENTS; END-POINT MEASUREMENT; EXPERIMENTAL APPROACHES; FIRST-ORDER; FLUORANTHENE; HYDROPHOBIC ORGANIC CHEMICALS; HYDROPHOBIC ORGANIC COMPOUND; KINETIC DATA; LOW CONCENTRATIONS; MICROBIAL DEGRADATION; ORDERS OF MAGNITUDE; SPHINGOMONAS PAUCIMOBILIS; SUBSTRATE DEPLETION; TECHNICAL CHALLENGES;

BIODEGRADATION; KINETICS; MINERALOGY; ORGANIC CHEMICALS; RATE CONSTANTS;

DISSOLUTION;

FLUORANTHENE; HYDROPHOBIC ORGANIC COMPOUND; ORGANIC COMPOUND; PHENANTHRENE; UNCLASSIFIED DRUG;

BACTERIUM; BIOAVAILABILITY; BIODEGRADATION; BIOMINERALIZATION; BIOTRANSFORMATION; HYDROPHOBICITY; REACTION KINETICS; SOLUBILITY; SORPTION; SUBSTRATE; TOXICITY;

ARTICLE; BIODEGRADATION; BIOTRANSFORMATION; CONCENTRATION (PARAMETERS); DISSOLUTION; HYDROPHOBICITY; MINERALIZATION; NONHUMAN; SPHINGOMONAS PAUCIMOBILIS;

BIODEGRADATION, ENVIRONMENTAL; CULTURE TECHNIQUES; ENVIRONMENTAL POLLUTANTS; FLUORENES; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; KINETICS; PHENANTHRENES; PILOT PROJECTS; SILICONES; SPHINGOMONAS;

BACTERIA (MICROORGANISMS); SPHINGOMONAS PAUCIMOBILIS;

EID: 84860460493     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es204050u     Document Type: Article

References (34)

1. Alexander, M. Aging, bioavailability, and overestimation of risk from environmental pollutants Environ. Sci. Technol. 2000, 34, 4259-4265
2. Johnsen, A. R.; Wick, L. Y.; Harms, H. Principles of microbial PAH-degradation in soil Environ. Pollut. 2005, 133, 71-84
3. Han, X.; Nabb, D. L.; Mingoia, R. T.; Yang, C. H. Determination of xenobiotic intrinsic clearance in freshly isolated hepatocytes from rainbow trout (Oncorhynchus mykiss) and rat and its application in bioaccumulation assessment Environ. Sci. Technol. 2007, 41, 3269-3276
4. Han, X.; Mingoia, R. T.; Nabb, D. L.; Yang, C. H.; Snajdr, S. I.; Hoke, R. A. Xenobiotic intrinsic clearance in freshly isolated hepatocytes from rainbow trout (Oncorhynchus mykiss): Determination of trout hepatocellularity, optimization of cell concentrations and comparison of serum and serum-free incubations Aquat. Toxicol. 2008, 89, 11-17
5. Arnot, J. A.; Mackay, D.; Parkerton, T. F.; Bonnell, M. A database of fish biotransformation rates for organic chemicals Environ. Toxicol. Chem. 2008, 27, 2263-2270
6. Nishimoto, M.; Yanagida, G. K.; Stein, J. E.; Baird, W. M.; Varanasi, U. The metabolism of benzo(a)pyrene by English sole (Parophrys vetulus): Comparison between isolated hepatocytes in vitro and liver in vivo Xenobiotica 1992, 22, 949-961
7. Xue, W.; Warshawsky, D. Metabolic activation of polycyclic and heterocyclic aromatic hydrocarbons and DNA damage: A review Toxicol. Appl. Pharmacol. 2005, 206, 73-93
8. Lu, C.; Li, P.; Gallegos, R.; Uttamsingh, V.; Xia, C. Q.; Miwa, G. T.; Balani, S. K.; Gan, L. S. Comparison of intrinsic clearance in liver microsomes and hepatocytes from rats and humans: Evaluation of free fraction and uptake in hepatocytes Drug Metab. Dispos. 2006, 34, 1600-1605
9. Desai, A. M.; Autenrieth, R. L.; Dimitriou-Christidis, P.; McDonald, T. J. Biodegradation kinetics of select polycyclic aromatic hydrocarbon (PAH) mixtures by S phingomonas paucimobilis EPA 505 Biodegradation 2008, 19, 223-233
10. Wammer, K. H.; Peters, C. A. Polycyclic aromatic hydrocarbon biodegradation rates: A structure-based study Environ. Sci. Technol. 2005, 39, 2571-2578
11. Dimitriou-Christidis, P.; Autenrieth, R. L.; McDonald, T. J.; Desai, A. M. Measurement of biodegradability parameters for single unsubstituted and methylated polycyclic aromatic hydrocarbons in liquid bacterial suspensions Biotechnol. Bioeng. 2007, 97, 922-932
12. Wick, L. Y.; Colangelo, T.; Harms, H. Kinetics of mass transfer-limited bacterial growth on solid PAHs Environ. Sci. Technol. 2001, 35, 354-361
13. Brown, R. S.; Akhtar, P.; Akerman, J.; Hampel, L.; Kozin, I. S.; Villerius, L. A.; Klamer, H. J. C. Partition controlled delivery of hydrophobic substances in toxicity tests using poly(dimethylsiloxane) (PDMS) films Environ. Sci. Technol. 2001, 35, 4097-4102
14. Smith, K. E. C.; Dom, N.; Blust, R.; Mayer, P. Controlling and maintaining exposure of hydrophobic organic compounds in aquatic toxicity tests by passive dosing Aquat. Toxicol. 2010, 98, 15-24
15. Smith, K. E. C.; Oostingh, G. J.; Mayer, P. Passive dosing for producing defined and constant exposure of hydrophobic organic compounds during in vitro toxicity tests Chem. Res. Toxicol. 2010, 23, 55-65
16. ter Laak, T. L.; ter Bekke, M. A.; Hermens, J. L. M. Dissolved organic matter enhances transport of PAHs to aquatic organisms Environ. Sci. Technol. 2009, 43, 7212-7217
17. Gouliarmou, V.; Smith, K. E. C.; de Jonge, L. W.; Mayer, P. Measuring binding and speciation of hydrophobic organic chemicals at controlled freely dissolved concentrations and without phase separation Anal. Chem. 2012, 84, 1602-1608
18. Luning Prak, D. J.; Pritchard, P. H. Degradation of polycyclic aromatic hydrocarbons dissolved in Tween 80 surfactant solutions by Sphingomonas paucimobilis EPA 505 Can. J. Microbiol. 2002, 48, 151-158
19. Johnsen, A. R.; Hausner, M.; Schnell, A.; Wuertz, S. Evaluation of fluorescently labeled lectins for noninvasive localization of extracellular polymeric substances in sphingomonas biofilms Appl. Environ. Microbiol. 2000, 66, 3487-3491
20. Rusina, T. P.; Smedes, F.; Klanova, J.; Booij, K.; Holoubek, I. Polymer selection for passive sampling: A comparison of critical properties Chemosphere 2007, 68, 1344-1351
21. Kwon, J. H.; Wuethrich, T.; Mayer, P.; Escher, B. I. Development of a dynamic delivery method for in vitro bioassays Chemosphere 2009, 76, 83-90
22. ter Laak, T. L.; Busser, F. J. M.; Hermens, J. L. M. Poly(dimethylsiloxane) as passive sampler material for hydrophobic chemicals: Effect of chemical properties and sampler characteristics on partitioning and equilibration times Anal. Chem. 2008, 80, 3859-3866
23. Schluep, M.; Imboden, D. M.; Galli, R.; Zeyer, J. Mechanisms affecting the dissolution of nonaqueous phase liquids into the aqueous phase in slow-stirring batch systems Environ. Toxicol. Chem. 2001, 20, 459-466
24. Hayduk, W.; Laudie, H. Prediction of diffusion-coefficients for nonelectrolytes in dilute aqueous-solutions AIChE J. 1974, 20, 611-615
25. Levich, V. G. Physicochemical hydrodynamics; Prentice-Hall: Englewood Cliffs, NY, 1962.
26. Harms, H.; Zehnder, A. J. B. Influence of substrate diffusion on degradation of dibenzofuran and 3-chlorodibenzofuran by attached and suspended bacteria Appl. Environ. Microbiol. 1994, 60, 2736-2745
27. Loferer-Krössbacher, M.; Klima, J.; Psenner, R. Determination of bacterial cell dry mass by transmission electron microscopy and densitometric image analysis Appl. Environ. Microbiol. 1998, 64, 688-694
28. Bratbak, G.; Dundas, I. Bacterial dry-matter content and biomass estimations Appl. Environ. Microbiol. 1984, 48, 755-757
29. Guha, S.; Jaffé, P. R. Determination of monod kinetic coefficients for volatile hydrophobic organic compounds Biotechnol. Bioeng. 1996, 50, 693-699
30. Guha, S.; Peters, C. A.; Jaffe, P. R. Multisubstrate biodegradation kinetics of naphthalene, phenanthrene, and pyrene mixtures Biotechnol. Bioeng. 1999, 65, 491-499
31. Knightes, C. D.; Peters, C. A. Aqueous phase biodegradation kinetics of 10 PAH compounds Environ. Eng. Sci. 2003, 20, 207-218
32. Lee, Y.; Otton, S. V.; Campbell, D. A.; Moore, M. M.; Kennedy, C. J.; Gobas, F. A. P. C Measuring in vitro biotransformation rates of super hydrophobic chemicals in rat liver S9 fractions using thin-film sorbent-phase dosing Environ. Sci. Technol. 2012, 46, 410-418
33. Khorasani, M. T.; MoemenBellah, S.; Mirzadeh, H.; Sadatnia, B. Effect of surface charge and hydrophobicity of polyurethanes and silicone rubbers on l929 cells response Colloid Surf. B 2006, 51, 112-119
34. Khorasani, M. T.; Mirzadeh, H. In vitro blood compatibility of modified PDMS surfaces as superhydrophobic and superhydrophilic materials J. Appl. Polym. Sci. 2004, 91, 2042-2047