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Volumn 20, Issue 9, 2011, Pages 1558-1565

Crystal structure of the C17/25 subcomplex from Schizosaccharomyces pombe RNA polymerase III

Author keywords

C17 25; RNA polymerase III; Rpb4 7 family; Rpc17 25; Transcription; X ray crystallography

Indexed keywords

DNA DIRECTED RNA POLYMERASE III; FUNGAL PROTEIN; PROTEIN RPB4; PROTEIN RPO E; PROTEIN RPOF; PROTEIN SUBUNIT; SCHIZOSACCHAROMYCES POMBE PROTEIN; UNCLASSIFIED DRUG;

EID: 84860408300     PISSN: 09618368     EISSN: 1469896X     Source Type: Journal    
DOI: 10.1002/pro.682     Document Type: Article
Times cited : (4)

References (43)
  • 1
    • 8544251268 scopus 로고    scopus 로고
    • Rpb4 and Rpb7: Subunits of RNA polymerase II and beyond
    • Choder M. (2004) Rpb4 and Rpb7: Subunits of RNA polymerase II and beyond. Trends Biochem Sci 29:674-681.
    • (2004) Trends Biochem Sci , vol.29 , pp. 674-681
    • Choder, M.1
  • 2
    • 70549090264 scopus 로고    scopus 로고
    • Structure-function analysis of RNA polymerases I and III
    • Werner M., Thuriaux P., Soutourina J. (2009) Structure-function analysis of RNA polymerases I and III. Curr Opin Struct Biol 19:740-745.
    • (2009) Curr Opin Struct Biol , vol.19 , pp. 740-745
    • Werner, M.1    Thuriaux, P.2    Soutourina, J.3
  • 3
    • 36549073601 scopus 로고    scopus 로고
    • The expanding RNA polymerase III transcriptome
    • DOI 10.1016/j.tig.2007.09.001, PII S0168952507003071
    • Dieci G., Fiorino G., Castelnuovo M., Teichmann M., Pagano A. (2007) The expanding RNA polymerase III transcriptome. Trends Genet 23:614-622. (Pubitemid 350180140)
    • (2007) Trends in Genetics , vol.23 , Issue.12 , pp. 614-622
    • Dieci, G.1    Fiorino, G.2    Castelnuovo, M.3    Teichmann, M.4    Pagano, A.5
  • 4
    • 0030034259 scopus 로고    scopus 로고
    • Facilitated recycling pathway for RNA polymerase III
    • DOI 10.1016/S0092-8674(00)80979-4
    • Dieci G., Sentenac A. (1996) Facilitated recycling pathway for RNA polymerase III. Cell 84:245-252. (Pubitemid 26040844)
    • (1996) Cell , vol.84 , Issue.2 , pp. 245-252
    • Dieci, G.1    Sentenac, A.2
  • 5
    • 0035967858 scopus 로고    scopus 로고
    • The RNA polymerase III transcription apparatus
    • DOI 10.1006/jmbi.2001.4732
    • Geiduschek E.P., Kassavetis G.A. (2001) The RNA polymerase III transcription apparatus. J Mol Biol 310:1-26. (Pubitemid 32621715)
    • (2001) Journal of Molecular Biology , vol.310 , Issue.1 , pp. 1-26
    • Geiduschek, E.P.1    Kassavetis, G.A.2
  • 6
    • 0035394633 scopus 로고    scopus 로고
    • Comparison of the RNA polymerase III transcription machinery in Schizosaccharomyces pombe, Saccharomyces cerevisiae and human
    • Huang Y., Maraia R.J. (2001) Comparison of the RNA polymerase III transcription machinery in Schizosaccharomyces pombe, Saccharomyces cerevisiae and human. Nucleic Acids Res 29:2675-2690. (Pubitemid 32685030)
    • (2001) Nucleic Acids Research , vol.29 , Issue.13 , pp. 2675-2690
    • Huang, Y.1    Maraia, R.J.2
  • 8
    • 77951608945 scopus 로고    scopus 로고
    • The increase in the number of subunits in eukaryotic RNA polymerase III relative to RNA polymerase II is due to the permanent recruitment of general transcription factors
    • Carter R., Drouin G. (2010) The increase in the number of subunits in eukaryotic RNA polymerase III relative to RNA polymerase II is due to the permanent recruitment of general transcription factors. Mol Biol Evol 27:1035-1043.
    • (2010) Mol Biol Evol , vol.27 , pp. 1035-1043
    • Carter, R.1    Drouin, G.2
  • 9
    • 77449109937 scopus 로고    scopus 로고
    • The C53/C37 subcomplex of RNA polymerase III lies near the active site and participates in promoter opening
    • Kassavetis G.A., Prakash P., Shim E. (2010) The C53/C37 subcomplex of RNA polymerase III lies near the active site and participates in promoter opening. J Biol Chem 285:2695-2706.
    • (2010) J Biol Chem , vol.285 , pp. 2695-2706
    • Kassavetis, G.A.1    Prakash, P.2    Shim, E.3
  • 10
    • 30444450804 scopus 로고    scopus 로고
    • A subcomplex of RNA polymerase III subunits involved in transcription termination and reinitiation
    • DOI 10.1038/sj.emboj.7600915, PII 7600915
    • Landrieux E., Alic N., Ducrot C., Acker J., Riva M., Carles C. (2006) A subcomplex of RNA polymerase III subunits involved in transcription termination and reinitiation. EMBO J 25:118-128. (Pubitemid 43077301)
    • (2006) EMBO Journal , vol.25 , Issue.1 , pp. 118-128
    • Landrieux, E.1    Alic, N.2    Ducrot, C.3    Acker, J.4    Riva, M.5    Carles, C.6
  • 11
    • 0032967635 scopus 로고    scopus 로고
    • Mutagenesis of yeast TFIIIB70 reveals C-terminal residues critical for interaction with TBP and C34
    • DOI 10.1006/jmbi.1999.2724
    • Andrau J.C., Sentenac A., Werner M. (1999) Mutagenesis of yeast TFIIIB70 reveals C-terminal residues critical for interaction with TBP and C34. J Mol Biol 288:511-520. (Pubitemid 29240512)
    • (1999) Journal of Molecular Biology , vol.288 , Issue.4 , pp. 511-520
    • Andrau, J.-C.1    Sentenac, A.2    Werner, M.3
  • 12
    • 0030766849 scopus 로고    scopus 로고
    • Dual role of the C34 subunit of RNA polymerase III in transcription initiation
    • DOI 10.1093/emboj/16.18.5730
    • Brun I., Sentenac A., Werner M. (1997) Dual role of the C34 subunit of RNA polymerase III in transcription initiation. EMBO J 16:5730-5741. (Pubitemid 27399864)
    • (1997) EMBO Journal , vol.16 , Issue.18 , pp. 5730-5741
    • Brun, I.1    Sentenac, A.2    Werner, M.3
  • 13
    • 0028872606 scopus 로고
    • A mutation in the C31 subunit of Saccharomyces cerevisiae RNA polymerase III affects transcription initiation
    • Thuillier V., Stettler S., Sentenac A., Thuriaux P., Werner M. (1995) A mutation in the C31 subunit of Saccharomyces cerevisiae RNA polymerase III affects transcription initiation. EMBO J 14:351-359.
    • (1995) EMBO J , vol.14 , pp. 351-359
    • Thuillier, V.1    Stettler, S.2    Sentenac, A.3    Thuriaux, P.4    Werner, M.5
  • 16
    • 0043163795 scopus 로고    scopus 로고
    • I subunits A14/A43 and the archaeal RNAP subunits E/F
    • DOI 10.1093/nar/gkg652
    • Meka H., Daoust G., Arnvig K.B., Werner F., Brick P., Onesti S. (2003) Structural and functional homology between the RNAP(I) subunits A14/A43 and the archaeal RNAP subunits E/F. Nucleic Acids Res 31:4391-4400. (Pubitemid 37441799)
    • (2003) Nucleic Acids Research , vol.31 , Issue.15 , pp. 4391-4400
    • Meka, H.1    Daoust, G.2    Arnvig, K.B.3    Werner, F.4    Brick, P.5    Onesti, S.6
  • 18
    • 0029014760 scopus 로고
    • The association of three subunits with yeast RNA polymerase is stabilized by A14
    • Smid A., Riva M., Bouet F., Sentenac A., Carles C. (1995) The association of three subunits with yeast RNA polymerase is stabilized by A14. J Biol Chem 270:13534-13540.
    • (1995) J Biol Chem , vol.270 , pp. 13534-13540
    • Smid, A.1    Riva, M.2    Bouet, F.3    Sentenac, A.4    Carles, C.5
  • 19
    • 0024396228 scopus 로고
    • RNA polymerase II subunit RPB4 is essential for high- and low-temperature yeast cell growth
    • Woychik N.A., Young R.A. (1989) RNA polymerase II subunit RPB4 is essential for high- and low-temperature yeast cell growth. Mol Cell Biol 9:2854-2859. (Pubitemid 19163047)
    • (1989) Molecular and Cellular Biology , vol.9 , Issue.7 , pp. 2854-2859
    • Woychik, N.A.1    Young, R.A.2
  • 20
    • 53849145660 scopus 로고    scopus 로고
    • Archaeal RNA polymerase subunits E and F are not required for transcription in vitro, but a Thermococcus kodakarensis mutant lacking subunit F is temperature-sensitive
    • Hirata A., Kanai T., Santangelo T.J., Tajiri M., Manabe K., Reeve J.N., Imanaka T., Murakami K.S. (2008) Archaeal RNA polymerase subunits E and F are not required for transcription in vitro, but a Thermococcus kodakarensis mutant lacking subunit F is temperature-sensitive. Mol Microbiol 70:623-633.
    • (2008) Mol Microbiol , vol.70 , pp. 623-633
    • Hirata, A.1    Kanai, T.2    Santangelo, T.J.3    Tajiri, M.4    Manabe, K.5    Reeve, J.N.6    Imanaka, T.7    Murakami, K.S.8
  • 21
    • 33745499068 scopus 로고    scopus 로고
    • Structural Biology of RNA Polymerase III: Subcomplex C17/25 X-Ray Structure and 11 Subunit Enzyme Model
    • DOI 10.1016/j.molcel.2006.05.013, PII S1097276506003285
    • Jasiak A.J., Armache K-J, Martens B., Jansen R-P, Cramer P. (2006) Structural biology of RNA polymerase III: Subcomplex C17/25 X-ray structure and 11 subunit enzyme model. Mol Cell 23:71-81. (Pubitemid 43963441)
    • (2006) Molecular Cell , vol.23 , Issue.1 , pp. 71-81
    • Jasiak, A.J.1    Armache, K.-J.2    Martens, B.3    Jansen, R.-P.4    Cramer, P.5
  • 25
    • 28544436370 scopus 로고    scopus 로고
    • Crystal structure and RNA binding of the Rpb4/Rpb7 subunits of human RNA polymerase II
    • DOI 10.1093/nar/gki945
    • Meka H., Werner F., Cordell S.C., Onesti S., Brick P. (2005) Crystal structure and RNA binding of the Rpb4/Rpb7 subunits of human RNA polymerase II. Nucleic Acids Res 33:6435-6444. (Pubitemid 41742580)
    • (2005) Nucleic Acids Research , vol.33 , Issue.19 , pp. 6435-6444
    • Meka, H.1    Werner, F.2    Cordell, S.C.3    Onesti, S.4    Brick, P.5
  • 26
    • 0035930324 scopus 로고    scopus 로고
    • Structure of an archaeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex
    • DOI 10.1016/S1097-2765(01)00379-3
    • Todone F., Brick P., Werner F., Weinzierl R.O., Onesti S. (2001) Structure of an archaeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex. Mol Cell 8:1137-1143. (Pubitemid 34031815)
    • (2001) Molecular Cell , vol.8 , Issue.5 , pp. 1137-1143
    • Todone, F.1    Brick, P.2    Werner, F.3    Weinzierl, R.O.J.4    Onesti, S.5
  • 27
    • 39149142997 scopus 로고    scopus 로고
    • The X-ray crystal structure of RNA polymerase from Archaea
    • DOI 10.1038/nature06530, PII NATURE06530
    • Hirata A., Klein B.J., Murakami K.S. (2008) The X-ray crystal structure of RNA polymerase from Archaea. Nature 451:851-854. (Pubitemid 351253162)
    • (2008) Nature , vol.451 , Issue.7180 , pp. 851-854
    • Hirata, A.1    Klein, B.J.2    Murakami, K.S.3
  • 29
    • 33947369108 scopus 로고    scopus 로고
    • Insights into Transcription Initiation and Termination from the Electron Microscopy Structure of Yeast RNA Polymerase III
    • DOI 10.1016/j.molcel.2007.02.016, PII S1097276507001165
    • Fernández-Tornero C., Böttcher B., Riva M., Carles C., Steuerwald U., Ruigrok R.W.H., Sentenac A., Müller C.W., Schoehn G. (2007) Insights into transcription initiation and termination from the electron microscopy structure of yeast RNA polymerase III. Mol Cell 25:813-823. (Pubitemid 46442793)
    • (2007) Molecular Cell , vol.25 , Issue.6 , pp. 813-823
    • Fernandez-Tornero, C.1    Bottcher, B.2    Riva, M.3    Carles, C.4    Steuerwald, U.5    Ruigrok, R.W.H.6    Sentenac, A.7    Muller, C.W.8    Schoehn, G.9
  • 32
    • 77954257799 scopus 로고    scopus 로고
    • ConSurf 2010: Calculating evolutionary conservation in sequence and structure of proteins and nucleic acids
    • Ashkenazy H., Erez E., Martz E., Pupko T., Ben-Tal N. (2010) ConSurf 2010: Calculating evolutionary conservation in sequence and structure of proteins and nucleic acids. Nucleic Acids Res 38:W529-W533.
    • (2010) Nucleic Acids Res , vol.38
    • Ashkenazy, H.1    Erez, E.2    Martz, E.3    Pupko, T.4    Ben-Tal, N.5
  • 33
    • 34347388470 scopus 로고    scopus 로고
    • UniRef: Comprehensive and non-redundant UniProt reference clusters
    • DOI 10.1093/bioinformatics/btm098
    • Suzek B.E., Huang H., McGarvey P., Mazumder R., Wu C.H. (2007) UniRef: Comprehensive and non-redundant UniProt reference clusters. Bioinformatics 23:1282-1288. (Pubitemid 47050545)
    • (2007) Bioinformatics , vol.23 , Issue.10 , pp. 1282-1288
    • Suzek, B.E.1    Huang, H.2    McGarvey, P.3    Mazumder, R.4    Wu, C.H.5
  • 34
    • 34548751368 scopus 로고    scopus 로고
    • Meta-PPISP: A meta web server for protein-protein interaction site prediction
    • DOI 10.1093/bioinformatics/btm434
    • Qin S., Zhou H-X (2007) meta-PPISP: A meta web server for protein-protein interaction site prediction. Bioinformatics 23:3386-3387. (Pubitemid 350238893)
    • (2007) Bioinformatics , vol.23 , Issue.24 , pp. 3386-3387
    • Qin, S.1    Zhou, H.-X.2
  • 36
    • 0028103275 scopus 로고
    • The CCP4 suite: Programs for protein crystallography
    • Collaborative Computational Project Number 4
    • Collaborative Computational Project Number 4(1994) The CCP4 suite: programs for protein crystallography. Acta Crystallogr D Biol Crystallogr 50:760-763.
    • (1994) Acta Crystallogr D Biol Crystallogr , vol.50 , pp. 760-763
  • 42
    • 45949107473 scopus 로고    scopus 로고
    • Recent developments in the MAFFT multiple sequence alignment program
    • DOI 10.1093/bib/bbn013, Special Issue: Critical Technologies for Bioinformatics
    • Katoh K., Toh H. (2008) Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform 9:286-298. (Pubitemid 351890825)
    • (2008) Briefings in Bioinformatics , vol.9 , Issue.4 , pp. 286-298
    • Katoh, K.1    Toh, H.2
  • 43
    • 0030203863 scopus 로고    scopus 로고
    • TreeView: An application to display phylogenetic trees on personal computers
    • Page R.D. (1996) TreeView: An application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.1


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