-
1
-
-
0000847921
-
Indices of multiloci linkage disequilibrium
-
Agapow P.M., Burt A. Indices of multiloci linkage disequilibrium. Mol. Ecol. Notes 2001, 1:101-102.
-
(2001)
Mol. Ecol. Notes
, vol.1
, pp. 101-102
-
-
Agapow, P.M.1
Burt, A.2
-
2
-
-
78149426554
-
Clonal species Trichoderma parareesei sp. nov. likely resembles the ancestor of the cellulase producer Hypocrea jecorina/T. reesei
-
Atanasova L., Jaklitsch W.M., Komoń-Zelazowska M., Kubicek C.P., Druzhinina I.S. Clonal species Trichoderma parareesei sp. nov. likely resembles the ancestor of the cellulase producer Hypocrea jecorina/T. reesei. Appl. Environ. Microbiol. 2010, 76:7259-7267.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 7259-7267
-
-
Atanasova, L.1
Jaklitsch, W.M.2
Komoń-Zelazowska, M.3
Kubicek, C.P.4
Druzhinina, I.S.5
-
3
-
-
77954336858
-
ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases
-
Bellemain E., Carlsen T., Brochmann C., Coissac E., Taberlet P., Kauserud H. ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases. BMC Microbiol. 2010, 10:189.
-
(2010)
BMC Microbiol.
, vol.10
, pp. 189
-
-
Bellemain, E.1
Carlsen, T.2
Brochmann, C.3
Coissac, E.4
Taberlet, P.5
Kauserud, H.6
-
4
-
-
77956273412
-
Using population genetic theory and DNA sequences for species detection and identification in asexual organisms
-
Birky C.W., Adams J., Gemmel M., Perry J. Using population genetic theory and DNA sequences for species detection and identification in asexual organisms. PLoS One 2010, 5:e10609.
-
(2010)
PLoS One
, vol.5
-
-
Birky, C.W.1
Adams, J.2
Gemmel, M.3
Perry, J.4
-
5
-
-
0000579737
-
Revision of the genus Trichoderma: I. Section Longibrachiatum, new section
-
Bissett J. Revision of the genus Trichoderma: I. Section Longibrachiatum, new section. Can. J. Bot. 1984, 62:924-931.
-
(1984)
Can. J. Bot.
, vol.62
, pp. 924-931
-
-
Bissett, J.1
-
6
-
-
0000384780
-
Revision of the genus Trichoderma: II. Infrageneric classification
-
Bissett J. Revision of the genus Trichoderma: II. Infrageneric classification. Can. J. Bot. 1991, 69:2357-2372.
-
(1991)
Can. J. Bot.
, vol.69
, pp. 2357-2372
-
-
Bissett, J.1
-
7
-
-
4344589223
-
New species of Trichoderma from Asia
-
Bissett J., Szakacs G., Nolan C.A., Druzhinina I., Gradinger C.M., Kubicek C.P. New species of Trichoderma from Asia. Can. J. Bot. 2003, 81:570-586.
-
(2003)
Can. J. Bot.
, vol.81
, pp. 570-586
-
-
Bissett, J.1
Szakacs, G.2
Nolan, C.A.3
Druzhinina, I.4
Gradinger, C.M.5
Kubicek, C.P.6
-
8
-
-
33646167864
-
A simple and robust statistical test for detecting the presence of recombination
-
Bruen T.C., Philippe H., Bryant D. A simple and robust statistical test for detecting the presence of recombination. Genetics 2006, 172:2665-2681.
-
(2006)
Genetics
, vol.172
, pp. 2665-2681
-
-
Bruen, T.C.1
Philippe, H.2
Bryant, D.3
-
9
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana J. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 2000, 17:540-552.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
10
-
-
0345295170
-
Reproductive isolation and phylogenetic divergence in Neurospora: comparing methods of species recognition in a model eukaryote
-
Dettman J.R., Jacobson D.J., Turner E., Pringle A., Taylor J.W. Reproductive isolation and phylogenetic divergence in Neurospora: comparing methods of species recognition in a model eukaryote. Evolution 2003, 57:2721-2741.
-
(2003)
Evolution
, vol.57
, pp. 2721-2741
-
-
Dettman, J.R.1
Jacobson, D.J.2
Turner, E.3
Pringle, A.4
Taylor, J.W.5
-
11
-
-
84860376078
-
-
Trichoderma sect. Saturnisporum, sect. nov. and Trichoderma ghanense, sp. nov. Bull. Nat. Sci. Museum, Ser. B (Botany)
-
Doi, Y., Abe, I., Sugiyama, J., 1987. Trichoderma sect. Saturnisporum, sect. nov. and Trichoderma ghanense, sp. nov. Bull. Nat. Sci. Museum, Ser. B (Botany) 13, 1-9.
-
(1987)
, vol.13
, pp. 1-9
-
-
Doi, Y.1
Abe, I.2
Sugiyama, J.3
-
12
-
-
24944435502
-
An oligonucleotide barcode for species identification in Trichoderma and Hypocrea
-
Druzhinina I.S., Kopchinskiy A.G., Komoń M., Bissett J., Szakacs G., Kubicek C.P. An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. Fungal Genet. Biol. 2005, 42:813-928.
-
(2005)
Fungal Genet. Biol.
, vol.42
, pp. 813-928
-
-
Druzhinina, I.S.1
Kopchinskiy, A.G.2
Komoń, M.3
Bissett, J.4
Szakacs, G.5
Kubicek, C.P.6
-
13
-
-
53649104548
-
Alternative reproductive strategies of Hypocrea orientalis and genetically close but clonal Trichoderma longibrachiatum, both capable of causing invasive mycoses of humans
-
Druzhinina I.S., Komoń-Zelazowska M., Kredics L., Hatvani L., Antal Z., Belayneh T., Kubicek C.P. Alternative reproductive strategies of Hypocrea orientalis and genetically close but clonal Trichoderma longibrachiatum, both capable of causing invasive mycoses of humans. Microbiol. UK 2008, 154:3447-3459.
-
(2008)
Microbiol. UK
, vol.154
, pp. 3447-3459
-
-
Druzhinina, I.S.1
Komoń-Zelazowska, M.2
Kredics, L.3
Hatvani, L.4
Antal, Z.5
Belayneh, T.6
Kubicek, C.P.7
-
14
-
-
77949451000
-
Evolution and ecophysiology of the industrial producer Hypocrea jecorina (anamorph Trichoderma reesei) and a new sympatric agamospecies related to it
-
Druzhinina I.S., Komoń-Zelazowska M., Atanasova L., Seidl V., Kubicek C.P. Evolution and ecophysiology of the industrial producer Hypocrea jecorina (anamorph Trichoderma reesei) and a new sympatric agamospecies related to it. PLoS One 2010, 5:e9191.
-
(2010)
PLoS One
, vol.5
-
-
Druzhinina, I.S.1
Komoń-Zelazowska, M.2
Atanasova, L.3
Seidl, V.4
Kubicek, C.P.5
-
15
-
-
80053023139
-
Trichoderma: the genomics of opportunistic success
-
Druzhinina I.S., Seidl-Seiboth V., Herrera-Estrella A., Horwitz B.A., Kenerley C.M., Monte E., Mukherjee P.K., Zeilinger S., Grigoriev I.V., Kubicek C.P. Trichoderma: the genomics of opportunistic success. Nat. Microbiol. Rev. 2011, 16:749-759.
-
(2011)
Nat. Microbiol. Rev.
, vol.16
, pp. 749-759
-
-
Druzhinina, I.S.1
Seidl-Seiboth, V.2
Herrera-Estrella, A.3
Horwitz, B.A.4
Kenerley, C.M.5
Monte, E.6
Mukherjee, P.K.7
Zeilinger, S.8
Grigoriev, I.V.9
Kubicek, C.P.10
-
16
-
-
33646589012
-
Partition of the Botrytis cinerea complex in France using multiple gene genealogies
-
Fournier E., Giraud T., Albertini C., Brygoo Y. Partition of the Botrytis cinerea complex in France using multiple gene genealogies. Mycologia 2005, 97:1251-1267.
-
(2005)
Mycologia
, vol.97
, pp. 1251-1267
-
-
Fournier, E.1
Giraud, T.2
Albertini, C.3
Brygoo, Y.4
-
17
-
-
84860361287
-
-
The tribal dwelling in soil: taxon-specific metagenomics of Trichoderma reveals a narrow community of opportunistic species regulating the development of each other. Microbiol. UK November 10 (Epub ahead of print).
-
Friedl, M.A., Druzhinina, I.S., 2012. The tribal dwelling in soil: taxon-specific metagenomics of Trichoderma reveals a narrow community of opportunistic species regulating the development of each other. Microbiol. UK November 10 (Epub ahead of print).
-
(2012)
-
-
Friedl, M.A.1
Druzhinina, I.S.2
-
18
-
-
79961061785
-
-
Marine isolates of Trichoderma as potential halotolerant agents of biological control for arid-zone agriculture. Appl. Environ. Microbiol. June 10 (Epub ahead of print).
-
Gal-Hemed, I., Atanasova, L., Komon-Zelazowska, M., Druzhinina, I.S., Viterbo, A., Yarden, O., 2011. Marine isolates of Trichoderma as potential halotolerant agents of biological control for arid-zone agriculture. Appl. Environ. Microbiol. June 10 (Epub ahead of print).
-
(2011)
-
-
Gal-Hemed, I.1
Atanasova, L.2
Komon-Zelazowska, M.3
Druzhinina, I.S.4
Viterbo, A.5
Yarden, O.6
-
19
-
-
0002943668
-
-
Morphology and identification of Trichoderma. In Kubicek, C.P., Harman, G.E. (Eds.), Trichoderma and Gliocladium. Basic Biology, Taxonomy and Genetics, Taylor & Francis, London, UK
-
Gams, W., Bissett, J., 1998. Morphology and identification of Trichoderma. In Kubicek, C.P., Harman, G.E. (Eds.), Trichoderma and Gliocladium. Basic Biology, Taxonomy and Genetics, vol. 1. Taylor & Francis, London, UK, pp. 3-34.
-
(1998)
, vol.1
, pp. 3-34
-
-
Gams, W.1
Bissett, J.2
-
20
-
-
79960108950
-
-
in press. Species delimitation in fungal endophyte diversity studies and its implications in ecological and biogeographic inferences. Mol. Ecol. doi:10.1111/j.1365-294X.2011.05110.x
-
Gazis, R., Rehner, S.R., Chaverri, P., in press. Species delimitation in fungal endophyte diversity studies and its implications in ecological and biogeographic inferences. Mol. Ecol. doi:10.1111/j.1365-294X.2011.05110.x.
-
-
-
Gazis, R.1
Rehner, S.R.2
Chaverri, P.3
-
21
-
-
42449159494
-
Speciation in fungi
-
Giraud T., Refrégier G., Le Gac M., de Vienne D.M., Hood M.E. Speciation in fungi. Fungal Genet. Biol. 2008, 45:791-802.
-
(2008)
Fungal Genet. Biol.
, vol.45
, pp. 791-802
-
-
Giraud, T.1
Refrégier, G.2
Le Gac, M.3
de Vienne, D.M.4
Hood, M.E.5
-
22
-
-
33947194925
-
A new cultivation independent approach to detect and monitor common Trichoderma species in soils
-
Hagn A., Wallisch S., Radl V., Charles Munch J., Schloter M. A new cultivation independent approach to detect and monitor common Trichoderma species in soils. J. Microbiol. Methods 2007, 69:86-92.
-
(2007)
J. Microbiol. Methods
, vol.69
, pp. 86-92
-
-
Hagn, A.1
Wallisch, S.2
Radl, V.3
Charles Munch, J.4
Schloter, M.5
-
24
-
-
33947698819
-
Green mold diseases of Agaricus and Pleurotus spp. are caused by related but phylogenetically different Trichoderma species
-
Hatvani L., Antal Z., Manczinger L., Szekeres A., Druzhinina I.S., Kubicek C.P., Nagy A., Nagy E., Vágvölgy C., Kredics L. Green mold diseases of Agaricus and Pleurotus spp. are caused by related but phylogenetically different Trichoderma species. Phytopathology 2007, 97:532-537.
-
(2007)
Phytopathology
, vol.97
, pp. 532-537
-
-
Hatvani, L.1
Antal, Z.2
Manczinger, L.3
Szekeres, A.4
Druzhinina, I.S.5
Kubicek, C.P.6
Nagy, A.7
Nagy, E.8
Vágvölgy, C.9
Kredics, L.10
-
25
-
-
0000272378
-
Detecting cryptic species using allozyme data
-
Kluwer Academic/Plenum Publishers, New York, R.C. Bruce, R.G. Jaeger, L.D. Houck (Eds.)
-
Highton R. Detecting cryptic species using allozyme data. The Biology of Plethodontid Salamanders 2000, 215-241. Kluwer Academic/Plenum Publishers, New York. R.C. Bruce, R.G. Jaeger, L.D. Houck (Eds.).
-
(2000)
The Biology of Plethodontid Salamanders
, pp. 215-241
-
-
Highton, R.1
-
26
-
-
0031678692
-
SplitsTree: a program for analyzing and visualizing evolutionary data
-
Huson D.H. SplitsTree: a program for analyzing and visualizing evolutionary data. Bioinformatics 1998, 14:68-73.
-
(1998)
Bioinformatics
, vol.14
, pp. 68-73
-
-
Huson, D.H.1
-
27
-
-
33845269538
-
Hypocrea rufa/Trichoderma viride: a reassessment, and description of five closely related species with and without warted conidia
-
Jaklitsch W.M., Samuels G.J., Dodd S.L., Lu B.S., Druzhinina I.S. Hypocrea rufa/Trichoderma viride: a reassessment, and description of five closely related species with and without warted conidia. Stud. Mycol. 2006, 56:135-177.
-
(2006)
Stud. Mycol.
, vol.56
, pp. 135-177
-
-
Jaklitsch, W.M.1
Samuels, G.J.2
Dodd, S.L.3
Lu, B.S.4
Druzhinina, I.S.5
-
28
-
-
33644782783
-
Phylogeny and taxonomy of the North American clade of the Ceratocystis fimbriata complex
-
Johnson J.A., Harrington T.C., Engelbrecht C.J.B. Phylogeny and taxonomy of the North American clade of the Ceratocystis fimbriata complex. Mycologia 2005, 97:1067-1092.
-
(2005)
Mycologia
, vol.97
, pp. 1067-1092
-
-
Johnson, J.A.1
Harrington, T.C.2
Engelbrecht, C.J.B.3
-
29
-
-
0002136896
-
Ecology of Trichoderma
-
Taylor & Francis, London, UK, C.P. Kubicek, G.E. Harman (Eds.) Trichoderma and Gliocladium
-
Klein E., Eveleigh D.E. Ecology of Trichoderma. Basic Biology, Taxonomy and Genetics 1998, vol. 1:57-74. Taylor & Francis, London, UK. C.P. Kubicek, G.E. Harman (Eds.).
-
(1998)
Basic Biology, Taxonomy and Genetics
, vol.1
, pp. 57-74
-
-
Klein, E.1
Eveleigh, D.E.2
-
30
-
-
24944431722
-
TrichoBLAST: a multiloci database of phylogenetic markers for Trichoderma and Hypocrea powered by sequence diagnosis and similarity search tools
-
Kopchinskiy A., Komoń M., Kubicek C.P., Druzhinina I.S. TrichoBLAST: a multiloci database of phylogenetic markers for Trichoderma and Hypocrea powered by sequence diagnosis and similarity search tools. Mycol. Res. 2005, 109:658-660.
-
(2005)
Mycol. Res.
, vol.109
, pp. 658-660
-
-
Kopchinskiy, A.1
Komoń, M.2
Kubicek, C.P.3
Druzhinina, I.S.4
-
31
-
-
0034942559
-
Gene genealogies, cryptic species, and molecular evolution in the human pathogen Coccidioides immitis and relatives (Ascomycota, Onygenales)
-
Koufopanou V., Burt A., Szaro T., Taylor J.W. Gene genealogies, cryptic species, and molecular evolution in the human pathogen Coccidioides immitis and relatives (Ascomycota, Onygenales). Mol. Biol. Evol. 2001, 18:1246-1258.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1246-1258
-
-
Koufopanou, V.1
Burt, A.2
Szaro, T.3
Taylor, J.W.4
-
32
-
-
0042889034
-
Clinical importance of the genus Trichoderma. A review
-
Kredics L., Antal Z., Dóczi I., Manczinger L., Kevei F., Nagy E. Clinical importance of the genus Trichoderma. A review. Acta Microbiol. Immunol. Hung. 2003, 50:105-117.
-
(2003)
Acta Microbiol. Immunol. Hung.
, vol.50
, pp. 105-117
-
-
Kredics, L.1
Antal, Z.2
Dóczi, I.3
Manczinger, L.4
Kevei, F.5
Nagy, E.6
-
33
-
-
0347926115
-
Genetic and metabolic diversity of Trichoderma: a case study on South-East Asian isolates
-
Kubicek C.P., Bissett J., Kullnig-Gradinger C.M., Druzhinina I.S., Szakacs G. Genetic and metabolic diversity of Trichoderma: a case study on South-East Asian isolates. Fungal Genet. Biol. 2003, 38:310-317.
-
(2003)
Fungal Genet. Biol.
, vol.38
, pp. 310-317
-
-
Kubicek, C.P.1
Bissett, J.2
Kullnig-Gradinger, C.M.3
Druzhinina, I.S.4
Szakacs, G.5
-
35
-
-
70349772781
-
Metabolic engineering strategies for the improvement of cellulase production by Hypocrea jecorina
-
Kubicek C.P., Mikus M., Schuster A., Schmoll M., Seiboth B. Metabolic engineering strategies for the improvement of cellulase production by Hypocrea jecorina. Biotechnol. Biofuels 2009, 2:19.
-
(2009)
Biotechnol. Biofuels
, vol.2
, pp. 19
-
-
Kubicek, C.P.1
Mikus, M.2
Schuster, A.3
Schmoll, M.4
Seiboth, B.5
-
36
-
-
79955115574
-
Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
-
Kubicek C.P., Herrera-Estrella A., Seidl-Seiboth V., Martinez D.A., Druzhinina I.S., Thon M., Zeilinger S., Casas-Flores S., Horwitz B.A., Mukherjee P.K., Mukherjee M., Kredics L., Alcaraz L.D., Aerts A., Antal Z., Atanasova L., Cervantes-Badillo M.G., Challacombe J., Chertkov O., McCluskey K., Coulpier F., Deshpande N., von Döhren H., Ebbole D.J., Esquivel-Naranjo E.U., Fekete E., Flipphi M., Glaser F., Gómez-Rodríguez E.Y., Gruber S., Han C., Henrissat B., Hermosa R., Hernández-Oñate M., Karaffa L., Kosti I., Le Crom S., Lindquist E., Lucas S., Lübeck M., Lübeck P.S., Margeot A., Metz B., Misra M., Nevalainen H., Omann M., Packer N., Perrone G., Uresti-Rivera E.E., Salamov A., Schmoll M., Seiboth B., Shapiro H., Sukno S., Tamayo-Ramos J.A., Tisch D., Wiest A., Wilkinson H.H., Zhang M., Coutinho P.M., Kenerley C.M., Monte E., Baker S.E., Grigoriev I.V. Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biol. 2011, 12:R40.
-
(2011)
Genome Biol.
, vol.12
-
-
Kubicek, C.P.1
Herrera-Estrella, A.2
Seidl-Seiboth, V.3
Martinez, D.A.4
Druzhinina, I.S.5
Thon, M.6
Zeilinger, S.7
Casas-Flores, S.8
Horwitz, B.A.9
Mukherjee, P.K.10
Mukherjee, M.11
Kredics, L.12
Alcaraz, L.D.13
Aerts, A.14
Antal, Z.15
Atanasova, L.16
Cervantes-Badillo, M.G.17
Challacombe, J.18
Chertkov, O.19
McCluskey, K.20
Coulpier, F.21
Deshpande, N.22
von Döhren, H.23
Ebbole, D.J.24
Esquivel-Naranjo, E.U.25
Fekete, E.26
Flipphi, M.27
Glaser, F.28
Gómez-Rodríguez, E.Y.29
Gruber, S.30
Han, C.31
Henrissat, B.32
Hermosa, R.33
Hernández-Oñate, M.34
Karaffa, L.35
Kosti, I.36
Le Crom, S.37
Lindquist, E.38
Lucas, S.39
Lübeck, M.40
Lübeck, P.S.41
Margeot, A.42
Metz, B.43
Misra, M.44
Nevalainen, H.45
Omann, M.46
Packer, N.47
Perrone, G.48
Uresti-Rivera, E.E.49
Salamov, A.50
Schmoll, M.51
Seiboth, B.52
Shapiro, H.53
Sukno, S.54
Tamayo-Ramos, J.A.55
Tisch, D.56
Wiest, A.57
Wilkinson, H.H.58
Zhang, M.59
Coutinho, P.M.60
Kenerley, C.M.61
Monte, E.62
Baker, S.E.63
Grigoriev, I.V.64
more..
-
37
-
-
0030993696
-
Revision of Trichoderma sect. Longibrachiatum including related teleomorphs based on analysis of ribosomal DNA internal transcribed spacer sequences
-
Kuhls K., Lieckfeldt E., Samuels G.J., Börner T., Meyer W., Kubicek C.P. Revision of Trichoderma sect. Longibrachiatum including related teleomorphs based on analysis of ribosomal DNA internal transcribed spacer sequences. Mycologia 1997, 89:442-460.
-
(1997)
Mycologia
, vol.89
, pp. 442-460
-
-
Kuhls, K.1
Lieckfeldt, E.2
Samuels, G.J.3
Börner, T.4
Meyer, W.5
Kubicek, C.P.6
-
38
-
-
0032983267
-
Molecular re-identification of human pathogenic Trichoderma isolates as Trichoderma longibrachiatum and Trichoderma citrinoviride
-
Kuhls K., Lieckfeldt E., Börner T., Guého E. Molecular re-identification of human pathogenic Trichoderma isolates as Trichoderma longibrachiatum and Trichoderma citrinoviride. Med. Mycol. 1999, 37:25-33.
-
(1999)
Med. Mycol.
, vol.37
, pp. 25-33
-
-
Kuhls, K.1
Lieckfeldt, E.2
Börner, T.3
Guého, E.4
-
39
-
-
33947250760
-
Phylogenetic evidence of host-specific cryptic species in the anther smut fungus
-
Le Gac M., Hood M.E., Fournier E., Giraud T. Phylogenetic evidence of host-specific cryptic species in the anther smut fungus. Evolution 2007, 61:15-26.
-
(2007)
Evolution
, vol.61
, pp. 15-26
-
-
Le Gac, M.1
Hood, M.E.2
Fournier, E.3
Giraud, T.4
-
40
-
-
0000900405
-
Sexually competent, sucrose- and nitrate-assimilating strains of Hypocrea jecorina (Trichoderma reesei) from South American soils
-
Lieckfeldt E., Kullnig C.M., Samuels G.J., Kubicek C.P. Sexually competent, sucrose- and nitrate-assimilating strains of Hypocrea jecorina (Trichoderma reesei) from South American soils. Mycologia 2000, 92:374-380.
-
(2000)
Mycologia
, vol.92
, pp. 374-380
-
-
Lieckfeldt, E.1
Kullnig, C.M.2
Samuels, G.J.3
Kubicek, C.P.4
-
41
-
-
0026708873
-
Analyzing the mosaic structure of genes
-
Maynard Smith J. Analyzing the mosaic structure of genes. J. Mol. Evol. 1992, 35:126-129.
-
(1992)
J. Mol. Evol.
, vol.35
, pp. 126-129
-
-
Maynard Smith, J.1
-
42
-
-
79961093356
-
The rhizosphere of Coffea arabica in its native highland forests of Ethiopia is associated with a distinguished diversity of Trichoderma
-
Mullaw T.B., Kubicek C.P., Druzhinina I.S. The rhizosphere of Coffea arabica in its native highland forests of Ethiopia is associated with a distinguished diversity of Trichoderma. Diversity 2010, 2:527-549.
-
(2010)
Diversity
, vol.2
, pp. 527-549
-
-
Mullaw, T.B.1
Kubicek, C.P.2
Druzhinina, I.S.3
-
43
-
-
84860369900
-
-
Genedoc: a tool for editing and annotating multiple sequence alignments. (accessed 21.08.09).
-
Nicholas, K.B., Nicholas Jr., H.B., 1997. Genedoc: a tool for editing and annotating multiple sequence alignments. (accessed 21.08.09). http://www.psc.edu/biomed/genedoc.
-
(1997)
-
-
Nicholas, K.B.1
Nicholas Jr., H.B.2
-
44
-
-
39149141072
-
AWTY: a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
-
Nylander J.A., Wilgenbusch J.C., Warren D.L., Swofford D.L. AWTY: a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 2008, 25:581-583.
-
(2008)
Bioinformatics
, vol.25
, pp. 581-583
-
-
Nylander, J.A.1
Wilgenbusch, J.C.2
Warren, D.L.3
Swofford, D.L.4
-
45
-
-
77956498262
-
Diversity and potential antifungal properties of fungi associated with a Mediterranean sponge
-
Paz Z., Komon-Zelazowska M., Druzhinina I.S., Aveskamp M.M., Schnaiderman A., Aluma Y., Carmeli S., Ilan M., Yarden O. Diversity and potential antifungal properties of fungi associated with a Mediterranean sponge. Fungal Diversity 2009, 1:17-26.
-
(2009)
Fungal Diversity
, vol.1
, pp. 17-26
-
-
Paz, Z.1
Komon-Zelazowska, M.2
Druzhinina, I.S.3
Aveskamp, M.M.4
Schnaiderman, A.5
Aluma, Y.6
Carmeli, S.7
Ilan, M.8
Yarden, O.9
-
46
-
-
2442713484
-
-
Using MODELTEST and PAUP* to select a model of nucleotide substitution. In: Baxevanis, A.D., Davison, D.B., Page, R.D.M., Petsko, G.A., Stein, L.D., (Eds.), Current Protocols in Bioinformatics. John Wiley & Sons, Hoboken, New Jersey
-
Posada, D., 2003. Using MODELTEST and PAUP* to select a model of nucleotide substitution. In: Baxevanis, A.D., Davison, D.B., Page, R.D.M., Petsko, G.A., Stein, L.D., (Eds.), Current Protocols in Bioinformatics. John Wiley & Sons, Hoboken, New Jersey, pp. 6.5.1-6.5.14.
-
(2003)
, pp. 651-6514
-
-
Posada, D.1
-
47
-
-
25644460037
-
Cryptic speciation in the cosmopolitan and clonal human pathogenic fungus Aspergillus fumigates
-
Pringle A., Baker T., Platt J., Wares J., Latgé J.P., Taylor J.W. Cryptic speciation in the cosmopolitan and clonal human pathogenic fungus Aspergillus fumigates. Evolution 2005, 59:1886-1899.
-
(2005)
Evolution
, vol.59
, pp. 1886-1899
-
-
Pringle, A.1
Baker, T.2
Platt, J.3
Wares, J.4
Latgé, J.P.5
Taylor, J.W.6
-
48
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
Rozas J., Sanchez-DelBarrio J.C., Messeguer X., Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 2003, 19:2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sanchez-DelBarrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
49
-
-
34547105802
-
New Trichobrachins, 11-residue peptaibols from a marine strain of Trichoderma longibrachiatum
-
Ruiz N., Wielgosz-Collin G., Poirier L., Grovel O., Petit K.E., Mohamed-Benkada M., du Pont T.R., Bissett J., Vérité P., Barnathan G., Pouchus Y.F. New Trichobrachins, 11-residue peptaibols from a marine strain of Trichoderma longibrachiatum. Peptides 2007, 28:1351-1358.
-
(2007)
Peptides
, vol.28
, pp. 1351-1358
-
-
Ruiz, N.1
Wielgosz-Collin, G.2
Poirier, L.3
Grovel, O.4
Petit, K.E.5
Mohamed-Benkada, M.6
du Pont, T.R.7
Bissett, J.8
Vérité, P.9
Barnathan, G.10
Pouchus, Y.F.11
-
50
-
-
32244443020
-
Trichoderma: systematics, the sexual state, and ecology
-
Samuels G.J. Trichoderma: systematics, the sexual state, and ecology. Phytopathology 2006, 96:195-206.
-
(2006)
Phytopathology
, vol.96
, pp. 195-206
-
-
Samuels, G.J.1
-
51
-
-
3843118662
-
The Hypocrea schweinitzii complex and Trichoderma sect. Longibrachiatum
-
Samuels G.J., Petrini O., Kuhls K., Lieckfeldt E., Kubicek C.P. The Hypocrea schweinitzii complex and Trichoderma sect. Longibrachiatum. Stud. Mycol. 1998, 41:1-54.
-
(1998)
Stud. Mycol.
, vol.41
, pp. 1-54
-
-
Samuels, G.J.1
Petrini, O.2
Kuhls, K.3
Lieckfeldt, E.4
Kubicek, C.P.5
-
52
-
-
84864930030
-
-
in press. The Longibrachiatum clade of Trichoderma: a revision with new species. Fungal Div.
-
Samuels, G.J., Ismaiel, A., Mullaw, T.B., Szakacs, G., Druzhinina, I.S., Kubicek, C.P., Jaklitsch, W.M., in press. The Longibrachiatum clade of Trichoderma: a revision with new species. Fungal Div. http://dx.doi.org/10.1007/s13225-012-0152-2.
-
-
-
Samuels, G.J.1
Ismaiel, A.2
Mullaw, T.B.3
Szakacs, G.4
Druzhinina, I.S.5
Kubicek, C.P.6
Jaklitsch, W.M.7
-
53
-
-
0032567410
-
Vertinoid polyketides from the saltwater culture of the fungus Trichoderma longibrachiatum separated from a Haliclona marine sponge
-
Sperry S., Samuels G.J., Crews P. Vertinoid polyketides from the saltwater culture of the fungus Trichoderma longibrachiatum separated from a Haliclona marine sponge. J. Org. Chem. 1998, 63:10011-10014.
-
(1998)
J. Org. Chem.
, vol.63
, pp. 10011-10014
-
-
Sperry, S.1
Samuels, G.J.2
Crews, P.3
-
54
-
-
84860387967
-
-
PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4.0b10. Sinauer Associates, Sunderland, MA.
-
Swofford, D.L., 2002. PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4.0b10. Sinauer Associates, Sunderland, MA.
-
(2002)
-
-
Swofford, D.L.1
-
55
-
-
79957613599
-
MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
-
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Mol. Biol. Evol. 2011, 28:2731-2739.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
56
-
-
0034500354
-
Phylogenetic species recognition and species concepts in fungi
-
Taylor J.W., Jacobson D.J., Kroken S., Kasuga T., Geiser D.M., Hibbett D.S., Fisher M.C. Phylogenetic species recognition and species concepts in fungi. Fungal Genet. Biol. 2000, 31:21-32.
-
(2000)
Fungal Genet. Biol.
, vol.31
, pp. 21-32
-
-
Taylor, J.W.1
Jacobson, D.J.2
Kroken, S.3
Kasuga, T.4
Geiser, D.M.5
Hibbett, D.S.6
Fisher, M.C.7
-
57
-
-
0031574072
-
The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl. Acids Res. 1997, 25:4876-4882.
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
58
-
-
0035949537
-
Identification of Trichoderma strains by image analysis of HPLC chromatograms
-
Thrane U., Poulsen S.B., Nirenberg H.I., Lieckfeldt E. Identification of Trichoderma strains by image analysis of HPLC chromatograms. FEMS Microbiol. Lett. 2001, 203:249-255.
-
(2001)
FEMS Microbiol. Lett.
, vol.203
, pp. 249-255
-
-
Thrane, U.1
Poulsen, S.B.2
Nirenberg, H.I.3
Lieckfeldt, E.4
-
59
-
-
0028149366
-
Convenient single-step, one tube purification of PCR products for direct sequencing
-
Werle E., Schneider C., Renner M., Völker M., Fiehn W. Convenient single-step, one tube purification of PCR products for direct sequencing. Nucl. Acids Res. 1994, 22:4354-4355.
-
(1994)
Nucl. Acids Res.
, vol.22
, pp. 4354-4355
-
-
Werle, E.1
Schneider, C.2
Renner, M.3
Völker, M.4
Fiehn, W.5
-
60
-
-
0042349781
-
Species pattern and genetic diversity of Trichoderma in a mid-European, primeval floodplain-forest
-
Wuczkowski M., Druzhinina I., Gherbawy Y., Klug B., Prillinger H.J., Kubicek C.P. Species pattern and genetic diversity of Trichoderma in a mid-European, primeval floodplain-forest. Microbiol. Res. 2003, 158:125-133.
-
(2003)
Microbiol. Res.
, vol.158
, pp. 125-133
-
-
Wuczkowski, M.1
Druzhinina, I.2
Gherbawy, Y.3
Klug, B.4
Prillinger, H.J.5
Kubicek, C.P.6
|