Molecular reidentification of human pathogenic Trichoderma isolates as Trichoderma longibrachiatum and Trichoderma citrinoviride

Medical Mycology

Volumn 37, Issue 1, 1999, Pages 25-33

  Kuhls, K ^a   Lieckfeldt, E ^a   Borner T ^a   Gueho E ^b  

^a HUMBOLDT UNIVERSITY   (Germany)

^b INSTITUT PASTEUR   (France)

Author keywords

Opportunistic mycoses; PCR fingerprinting; Ribosomal DNA; Trichoderma

Indexed keywords

RIBOSOME DNA;

ARTICLE; DNA FINGERPRINTING; DNA SEQUENCE; FUNGUS IDENTIFICATION; HUMAN; MYCOSIS; OPPORTUNISTIC INFECTION; POLYMERASE CHAIN REACTION; TRICHODERMA;

DNA FINGERPRINTING; DNA, FUNGAL; DNA, RIBOSOMAL; HUMANS; MYCOLOGICAL TYPING TECHNIQUES; MYCOSES; PHYLOGENY; POLYMERASE CHAIN REACTION; TRICHODERMA;

FUNGI; LONGIBRACHIATUM; TRICHODERMA; TRICHODERMA CITRINOVIRIDE; TRICHODERMA LONGIBRACHIATUM;

EID: 0032983267     PISSN: 13693786     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-280X.1999.00197.x     Document Type: Article

References (48)

1. Chet I. Trichoderma - application, mode of action, and potential as a biocontrol agent of soilborne plant pathogenic fungi. In: Chet I, ed. Innovative Approaches To Plant Disease Control, 1st edn., John Wiley & Sons, New York, 1987; 137-160.
2. Eveleigh DH. Trichoderma. In: Demain AL, Solomon NA, eds. Biology Of Industrial Microorganisms, 1st edn., The Benjamin Cummings Publ. Co. Ltd, London, Amsterdam, Tokyo, 1985: 487-509.
3. Muthumeenakshi S, Mills PR, Brown AE, Seaby DA. Intraspecific molecular variation among Trichoderma harzianum isolates colonizing mushroom compost in the British Isles. Microbiology 1994; 140: 769-777.
4. Gravesen S, Frisvad JC, Samson RA, eds. Microfungi, 1st edn. Copenhagen: Munksgaard, 1994: 150-1.
5. Larsen FO, Clementsen P, Hansen M, Maltbaek N, Gravesen S, Stahl Skov P, Norn S. The indoor microfungus Trichoderma viride potentiates histamine release from human bronchoalveolar cells. APMIS 1996; 104: 673-679.
6. Loeppky CB, Sprouse RF, Carlson JV, Everett ED. Trichoderma viride peritonitis. South Med J 1983; 76: 798-799.
7. Ragnaud JM, Marceau C, Roche-Bezian MC, Wone C. Infection péritonéale à Trichoderma koningii sur dialyse péritonéale continue ambulatoire. Méd Malad Infect 1984; 7/8: 402-405.
8. Tanis BC, Van den Pijl H, Van Ostrup ML, Kibbehaar RE, Chang PC. Fatal fungal peritonitis by Trichoderma longibrachiatum complicating peritoneal dialyses. Nephrol Dial Transplant 1995; 10: 114-116.
9. Jacobs F, Byl B, Bourgeois N, Coremans-Pelseneer J, Florquin S, Depré G, Van de Stadt J, Adler M, Gelin M, Thys JP. Trichoderma viride infection in a liver transplant recipient. Mycoses 1992; 35: 301-303.
10. Gautheret A, Dromer F, Bourhis J-H, Andremont A. Trichoderma pseudokoningii as a cause of fatal infection in a bone marrow transplant recipient. Clin Infect Dis 1995; 20: 1063-1064.
11. Seguin P, Degeilh B, Grulois I, Gacouin A, Maugendre S, Dufour T, Dupont B, Camus C. Successful treatment of a brain abscess due to Trichoderma longibrachiatum after surgical resection. Eur J Clin Microbiol Infect Dis 1995; 14: 445-448.
12. Munoz FM, Demmler GJ, Travis WR, Ogden AK, Rossmann SN, Rinaldi MG. Trichoderma longibrachiatum infection in a pediatric patient with aplastic anemia. J Clin Microbiol 1997; 35: 499-503.
13. Rifai MA. A revision of the genus Trichoderma. Mycol Papers 1969; 116: 1-56.
14. Bissett J. A revision of the genus Trichoderma. I. Section Longibrachiatum sect. nov. Can J Bot 1984; 62: 924-931.
15. Bissett J. A revision of the genus Trichoderma. II. Infrageneric classification. Can J Bot 1991; 69: 2357-2372.
16. Bissett J. A revision of the genus Trichoderma III. Section Pachybasium. Can J Bot 1991; 69: 2373-2417.
17. Bisselt J. A revision of the genus Trichoderma IV. Additional notes on section Longibrachiatum. Can J Bot 1991; 69: 2418-2420.
18. Samuels GJ. Trichoderma: a review of biology and systematics of the genus. Mycol Res 1996; 100: 923-935.
19. Stasz TE, Nixon K, Harman GE, Weeden NF, Kuter GA. Evaluation of phenetic species and phylogenetic relationships in the genus Trichoderma by cladistic analysis of isozym polymorphism. Mycologia 1989; 81: 391-403.
20. Samuels GJ, Petrini O, Manguin S. Morphological and macromolecular characterization of Hypocrea schweinitzii and its Trichoderma anamorph. Mycologia 1994; 86: 421-435.
21. Leuchtmann A, Petrini O, Samuels GJ. Isozyme subgroups in Trichoderma section Longibrachiatum. Mycologia 1996; 88: 384-394.
22. Meyer W, Morawetz R, Börner T, Kubicek CP. The use of DNA-fingerprint analysis in the classification of some species of the Trichoderma aggregate. Curr Gen 1992; 21: 27-30.
23. Morawetz R, Gruber F, Messner R, Kubicek CP. Presence, transcription and translation of cellobiohydrolase genes in several Trichoderma species. Curr Gen 1992; 21: 31-36.
24. Gonzalez R, Ramón D, Pérez-González JA. Cloning, sequence analysis and yeast expression of the eg/1 gene from Trichoderma longibrachiatum. App Microbiol Biotechnol 1992; 38: 370-375.
25. Meyer RJ. Mitochondrial DNAs and Plasmids as taxonomic characteristics in Trichoderma viride. App Environ Microbiol 1991; 57: 2269-2276.
26. Herrera-Estrella A, Goldman GH, Van Montagu M, Geremia RA. Electrophoretic karyotype and gene assignment to resolved chromosomes of Trichoderma spp. Mol Microbiol 1993; 7: 515-521.
27. Zimand G, Valinsky L, Elad Y, Chet I, Manulis S. Use of the RAPD procedure for identification of Trichoderma strains. Mycol Res 1994; 98: 531-534.
28. Fujimori F, Okuda T. Application of random amplified polymorphic DNA using the polymerase chain reaction for efficient elimination of duplicate strains in microbial screening. I. Fungi. J Antibiot 1994; 47: 173-182.
29. Turner D, Kovacs W, Kuhls K, Lieckfeldt E, Peter B, Arisan-Atac I, Strauss J, Samuels GJ, Börner T, Kubicek CP. Biogeography and phenotypic variation in Trichoderma sect. Longibrachiatum and associated Hypocrea spp. Mycol Res 1997; 101: 449-459.
30. Kuhls K, Lieckfeldt E, Börner T. PCR-fingerprinting used for comparison of ex type strains of Trichoderma species deposited in different culture collections. Microbiol Res 1995; 150: 363-371.
31. Kuhls K, Lieckfeldt E, Samuels GJ, Kovacs W, Meyer W, Petrini O, Gams W, Börner T, Kubicek CP. Molecular evidence that the asexual industrial fungus Trichoderma reesei is a clonal derivative of the ascomycete Hypocrea jecorina. Proc .Natl Acad Sci USA 1996; 93: 7755-7760.
32. Kuhls K, Lieckfeldt E, Samuels GJ, Meyer W, Kubicek CP, Borner T. Revision of Trichoderma sect. Longibrachiatum including related teleomorphs based on analysis of ribosomal DNA internal transcribed spacer sequences. Mycologia 1997; 89: 442-460.
33. Gruber F, Visser J, Kubicek CP, de Graaff LH. The development of a heterologous transformation system for the cellulolytic fungus Trichoderma reesei based on a pyrG-negative mutant strain. Curr Gen 1990; 18: 71-76.
34. Sambrook J, Fritsch EF, Maniatis T, eds. Molecular Cloning: A Laboratory Manual. New York: Cold Spring Harbour Laboratory Press, 1989.
35. Vilgalys R, Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 1990; 172: 4238-4246.
36. Swofford D. Phylogenetic Analysis Using Parsimony (PAUP 3.1.1)., Illinois Natural History Survey, Champaign, IL, USA, 1993.
37. Felsenstein J. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 1985; 39: 783-791.
38. Kuhls K. Anwendung Und Bewertung DNA-Analytischer Methoden Zur Lösung Taxonomisch-Phylogenetischer Fragestellungen Bei Filamentösen Pilzen Am Beispiel Der Gattung Trichoderma, 1st edn. Berlin: VWF-Verlag für Wissenschaft und Forschung, 1997.
39. Samuels GJ, Petrini O, Kuhls K, Lieckfeldt E, Kubicek CP. The Hypocrea schweinitzii complex and Trichoderma sect. Longibrachiatum. Stud Mycol 1998; 41: 1-54.
40. Hogan LH, Klein BS, Levitz SM. Virulence factors of medically important fungi. Clin Microbiol Rev 1996; 9: 469-488.
41. Nevelainen H, Suominen P, Taimisto K. On the safety of Trichoderma reesei. J Biotechnol 1994; 37: 193-200.
42. Hjortkjaer RK, Bille-Hansen V, Hazelden KP, McConville M, McGregor DB, Cuthbert JA, Greennough RJ, Chapman E, Gardner JR, Ashby R. Safety evaluation of Celluclast, an acid cellulase derived from Trichoderma reesei. Fd Chem Toxicol 1986; 24: 55-63.
43. Brückner H, Graf H, Bokel M. Paracelsin: characterization by NMR spectroscopy and circular dichroism, and hemolytic properties of a peptaibol antibiotic from the cellulolytically active mold Trichoderma reesei. Part B. Experientia 1984; 40: 1189-1197.
44. Taylor A. Some aspects of the chemistry and biology of the genus Hypocrea and its anamorphs, Trichoderma and Gliocladium. Proc Nova Scotia Inst Sci 1986; 36: 27-58.
45. Ritieni A, Fogliano V, Nanno D, Randazzo G, Altomare C, Perrone G, Bottalico A, Maddau L, Marras F, Paracelsin E, a new peptaibol from Trichoderma saturnisporum. J Nat Prod 1995; 58: 1745-1748.
46. Thanos M, Schönian G, Meyer W, Schweynoch C, Gräser Y, Mitchell TG, Presber W, Tietz H-J. Rapid identification of Candida species by DNA fingerprinting with PCR. J Clin Microbiol 1996; 34: 615-621.
47. Meyer W, Mitchell TG, Freedman EZ, Vilgalys R. Hybridization probes for conventional DNA fingerprinting used as single primers in the polymerase chain reaction to distinguish strains of Cryptococcus neoformans. J Clin Microbiol 1993; 31: 2274-2280.
48. de Hoog GS. Risk assessment of fungi reported from humans and animals. Mycoses 1996; 39: 407-417.