-
1
-
-
2942657813
-
Sex-determining mechanisms in land plants
-
Tanurdzic M, Banks JA, (2004) Sex-determining mechanisms in land plants. Plant Cell 16 Supplpp. S61-71.
-
(2004)
Plant Cell
, Issue.16 SUPPL
-
-
Tanurdzic, M.1
Banks, J.A.2
-
2
-
-
33745954371
-
Integrative plant biology: role of phloem long-distance macromolecular trafficking
-
Lough TJ, Lucas WJ, (2006) Integrative plant biology: role of phloem long-distance macromolecular trafficking. Ann Rev Plant Biol 57: 203-232.
-
(2006)
Ann Rev Plant Biol
, vol.57
, pp. 203-232
-
-
Lough, T.J.1
Lucas, W.J.2
-
3
-
-
0032717491
-
PHYTOALEXINS: What have we learned after 60 years?
-
Hammerschmidt R, (1999) PHYTOALEXINS: What have we learned after 60 years? Ann Rev Phytopathol 37: 285-306.
-
(1999)
Ann Rev Phytopathol
, vol.37
, pp. 285-306
-
-
Hammerschmidt, R.1
-
4
-
-
0033179329
-
Induced disease resistance: how do induced plants stop pathogens?
-
Hammerschmidt R, (1999) Induced disease resistance: how do induced plants stop pathogens? Physiol and Mol Plant Pathol 55: 77-84.
-
(1999)
Physiol and Mol Plant Pathol
, vol.55
, pp. 77-84
-
-
Hammerschmidt, R.1
-
5
-
-
67149146195
-
An integrated genetic and cytogenetic map of the cucumber genome
-
Ren Y, Zhang Z, Liu J, Staub JE, Han Y, et al. (2009) An integrated genetic and cytogenetic map of the cucumber genome. PLoS ONE 4: e5795.
-
(2009)
PLoS ONE
, vol.4
-
-
Ren, Y.1
Zhang, Z.2
Liu, J.3
Staub, J.E.4
Han, Y.5
-
6
-
-
70649085835
-
The genome of the cucumber, Cucumis sativus L
-
Huang S, Li R, Zhang Z, Li L, Gu X, et al. (2009) The genome of the cucumber, Cucumis sativus L. Nat Genet 41: 1275-1281.
-
(2009)
Nat Genet
, vol.41
, pp. 1275-1281
-
-
Huang, S.1
Li, R.2
Zhang, Z.3
Li, L.4
Gu, X.5
-
7
-
-
79960853743
-
The genome sequence of the North-European cucumber (Cucumis sativus L.) unravels evolutionary adaptation mechanisms in plants
-
Wóycicki R, Witkowicz J, Gawroński P, Da{ogonek}browska J, Lomsadze A, et al. (2011) The genome sequence of the North-European cucumber (Cucumis sativus L.) unravels evolutionary adaptation mechanisms in plants. PLoS ONE 6: e22728.
-
(2011)
PLoS ONE
, vol.6
-
-
Wóycicki, R.1
Witkowicz, J.2
Gawroński, P.3
Dabrowska, J.4
Lomsadze, A.5
-
8
-
-
77953600890
-
Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types
-
Guo S, Zheng Y, Joung JG, Liu S, Zhang Z, et al. (2010) Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types. BMC Gen 11: 384.
-
(2010)
BMC Gen
, vol.11
, pp. 384
-
-
Guo, S.1
Zheng, Y.2
Joung, J.G.3
Liu, S.4
Zhang, Z.5
-
9
-
-
77954920576
-
Transcriptional profiling of rapidly growing cucumber fruit by 454-pyrosequencing analysis
-
Ando K, Grumet R, (2010) Transcriptional profiling of rapidly growing cucumber fruit by 454-pyrosequencing analysis. J Amer Soc Hort Sci 135: 291-302.
-
(2010)
J Amer Soc Hort Sci
, vol.135
, pp. 291-302
-
-
Ando, K.1
Grumet, R.2
-
10
-
-
63149182169
-
Genetic background of host-pathogen interaction between Cucumis sativus L. and Pseudomonas syringae pv. lachrymans
-
Olczak-Woltman H, Schollenberger M, Niemirowicz-Szczytt K, (2009) Genetic background of host-pathogen interaction between Cucumis sativus L. and Pseudomonas syringae pv. lachrymans. J Appl Genet 50: 1-7.
-
(2009)
J Appl Genet
, vol.50
, pp. 1-7
-
-
Olczak-Woltman, H.1
Schollenberger, M.2
Niemirowicz-Szczytt, K.3
-
11
-
-
79952054584
-
The cucurbit downy mildew pathogen Pseudoperonospora cubensis
-
Savory EA, Granke LL, Quesada-Ocampo LM, Varbanova M, Hausbeck MK, et al. (2011) The cucurbit downy mildew pathogen Pseudoperonospora cubensis. Mol Plant Pathol 12: 217-226.
-
(2011)
Mol Plant Pathol
, vol.12
, pp. 217-226
-
-
Savory, E.A.1
Granke, L.L.2
Quesada-Ocampo, L.M.3
Varbanova, M.4
Hausbeck, M.K.5
-
12
-
-
78650882503
-
The downy mildew epidemic of 2004 and 2005 in the Eastern United States
-
In: Holmes G, editors, Raleigh, NC, Universal Press
-
Colucci SJ, Wehner TC, Holmes GJ, (2006) The downy mildew epidemic of 2004 and 2005 in the Eastern United States. In: Holmes G, editors. Proc Cucurbitaceae 2006 Raleigh, NC Universal Press.
-
(2006)
Proc Cucurbitaceae 2006
-
-
Colucci, S.J.1
Wehner, T.C.2
Holmes, G.J.3
-
13
-
-
79960977980
-
Distribution, host range and disease severity of Pseudoperonospora cubensis on cucurbits in the Czech Republic
-
Lebeda A, Pavelková J, Urban J, Sedláková B, (2011) Distribution, host range and disease severity of Pseudoperonospora cubensis on cucurbits in the Czech Republic. J Phytopathol 159: 589-596.
-
(2011)
J Phytopathol
, vol.159
, pp. 589-596
-
-
Lebeda, A.1
Pavelková, J.2
Urban, J.3
Sedláková, B.4
-
14
-
-
77956763442
-
Quantitative models for germination and infection of Pseudoperonospora cubensis in response to temperature and duration of leaf wetness
-
Arauz LF, Neufeld KN, Lloyd AL, Ojiambo PS, (2010) Quantitative models for germination and infection of Pseudoperonospora cubensis in response to temperature and duration of leaf wetness. Phytopathol 100: 959-367.
-
(2010)
Phytopathol
, vol.100
, pp. 367-959
-
-
Arauz, L.F.1
Neufeld, K.N.2
Lloyd, A.L.3
Ojiambo, P.S.4
-
15
-
-
0005927125
-
Physiological Specialization in Pseudoperonospora cubensis
-
Thomas C, Inaba T, Cohen Y, (1987) Physiological Specialization in Pseudoperonospora cubensis. Phytopathol 77: 1621-1624.
-
(1987)
Phytopathol
, vol.77
, pp. 1621-1624
-
-
Thomas, C.1
Inaba, T.2
Cohen, Y.3
-
16
-
-
0037188956
-
Evidence for downy mildew races in cucumber tested in Asia, Europe, and North America
-
Shetty NV, Wehner TC, Thomas CE, Doruchowski RW, Vasanth Shetty KP, (2002) Evidence for downy mildew races in cucumber tested in Asia, Europe, and North America. Scientia Hort 94: 231-239.
-
(2002)
Scientia Hort
, vol.94
, pp. 231-239
-
-
Shetty, N.V.1
Wehner, T.C.2
Thomas, C.E.3
Doruchowski, R.W.4
Vasanth Shetty, K.P.5
-
17
-
-
0141649432
-
A set of Cucurbitaceae taxa for differentiation of Pseudoperonespora cubensis pathotypes
-
Lebeda A, Widrlechner MP, (2003) A set of Cucurbitaceae taxa for differentiation of Pseudoperonespora cubensis pathotypes. J Plant Dis Prot 110: 337-349.
-
(2003)
J Plant Dis Prot
, vol.110
, pp. 337-349
-
-
Lebeda, A.1
Widrlechner, M.P.2
-
18
-
-
0141832529
-
A new pathotype of Pseudoperonospora cubensis causing downy mildew in cucurbits in Israel
-
Cohen Y, Meron I, Mor N, Zuriel S, (2003) A new pathotype of Pseudoperonospora cubensis causing downy mildew in cucurbits in Israel. Phytoparasitica 31: 458-466.
-
(2003)
Phytoparasitica
, vol.31
, pp. 458-466
-
-
Cohen, Y.1
Meron, I.2
Mor, N.3
Zuriel, S.4
-
19
-
-
0141832524
-
Pathogenic variation of Pseudoperonospora cubensis in the Czech Republic and some other European countries
-
II International Symposium on Cucurbits 588
-
Lebeda A, (2002) Pathogenic variation of Pseudoperonospora cubensis in the Czech Republic and some other European countries. II International Symposium on Cucurbits 588 pp. 137-141.
-
(2002)
, pp. 137-141
-
-
Lebeda, A.1
-
20
-
-
70449419825
-
Distribution, harmfulness and pathogenic variability of cucurbit downy mildew in the Czech Republic
-
Lebeda A, Urban J, (2004) Distribution, harmfulness and pathogenic variability of cucurbit downy mildew in the Czech Republic. Acta Fytotech Zootech 7: 170-173.
-
(2004)
Acta Fytotech Zootech
, vol.7
, pp. 170-173
-
-
Lebeda, A.1
Urban, J.2
-
21
-
-
70249117519
-
Molecular polymorphisms between populations of Pseudoperonospora cubensis from Greece and the Czech Republic and the phytopathological and phylogenetic implications
-
Sarris P, Abdelhalim M, Kitner M, Skandalis N, Panopoulos N, et al. (2009) Molecular polymorphisms between populations of Pseudoperonospora cubensis from Greece and the Czech Republic and the phytopathological and phylogenetic implications. Plant Pathol 58: 933-943.
-
(2009)
Plant Pathol
, vol.58
, pp. 933-943
-
-
Sarris, P.1
Abdelhalim, M.2
Kitner, M.3
Skandalis, N.4
Panopoulos, N.5
-
22
-
-
79953744721
-
454 Genome sequencing of Pseudoperonospora cubensis reveals effector proteins with a QXLR translocation motif
-
Tian M, Win J, Savory E, Burkhardt A, Held M, et al. (2011) 454 Genome sequencing of Pseudoperonospora cubensis reveals effector proteins with a QXLR translocation motif. Mol Plant Microbe Interact 24: 543-553.
-
(2011)
Mol Plant Microbe Interact
, vol.24
, pp. 543-553
-
-
Tian, M.1
Win, J.2
Savory, E.3
Burkhardt, A.4
Held, M.5
-
23
-
-
84859320057
-
Alternative splicing of a multi-drug transporter from Pseudoperonospora cubensis generates an RXLR effector protein that elicits a rapid cell death
-
In press
-
Savory E, Zou C, Adhikari B, Hamilton JP, Buell CR, et al. (2012) Alternative splicing of a multi-drug transporter from Pseudoperonospora cubensis generates an RXLR effector protein that elicits a rapid cell death. PLoS ONE. In press.
-
(2012)
PLoS ONE
-
-
Savory, E.1
Zou, C.2
Adhikari, B.3
Hamilton, J.P.4
Buell, C.R.5
-
25
-
-
33749341110
-
A novel cucumber gene associated with systemic acquired resistance
-
Phuntumart V, Marro P, Métraux J-P, Sticher L, (2006) A novel cucumber gene associated with systemic acquired resistance. Plant Sci 171: 555-564.
-
(2006)
Plant Sci
, vol.171
, pp. 555-564
-
-
Phuntumart, V.1
Marro, P.2
Métraux, J.-P.3
Sticher, L.4
-
27
-
-
35148827341
-
Elicitors, effectors, and R genes: The new paradigm and a lifetime supply of questions
-
Bent AF, Mackey D, (2007) Elicitors, effectors, and R genes: The new paradigm and a lifetime supply of questions. Ann Rev Phytopathol 45: 399-436.
-
(2007)
Ann Rev Phytopathol
, vol.45
, pp. 399-436
-
-
Bent, A.F.1
Mackey, D.2
-
29
-
-
78651439220
-
Phylogenetic investigations in the genus Pseudoperonospora reveal overlooked species and cryptic diversity in the P. cubensis species cluster
-
Runge F, Choi Y-J, Thines M, (2011) Phylogenetic investigations in the genus Pseudoperonospora reveal overlooked species and cryptic diversity in the P. cubensis species cluster. Eur J Plant Pathol 129: 135-146.
-
(2011)
Eur J Plant Pathol
, vol.129
, pp. 135-146
-
-
Runge, F.1
Choi, Y.-J.2
Thines, M.3
-
30
-
-
0842270049
-
Plant eR genes that encode photorespiratory enzymes confer resistance against disease
-
Taler D, Galperin M, Benjamin I, Cohen Y, Kenigsbuch D, (2004) Plant eR genes that encode photorespiratory enzymes confer resistance against disease. Plant Cell 16: 172-184.
-
(2004)
Plant Cell
, vol.16
, pp. 172-184
-
-
Taler, D.1
Galperin, M.2
Benjamin, I.3
Cohen, Y.4
Kenigsbuch, D.5
-
31
-
-
79960108058
-
Screening cucumber (Cucumis sativus) for resistance to downy mildew (Pseudoperonospora cubensis)
-
NCSU Thesis
-
Criswell A, (2008) Screening cucumber (Cucumis sativus) for resistance to downy mildew (Pseudoperonospora cubensis). NCSU Thesis.
-
(2008)
-
-
Criswell, A.1
-
32
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
Wang ET, Sandberg R, Luo S, Khrebtukova I, Zhang L, et al. (2008) Alternative isoform regulation in human tissue transcriptomes. Nature 456: 470-476.
-
(2008)
Nature
, vol.456
, pp. 470-476
-
-
Wang, E.T.1
Sandberg, R.2
Luo, S.3
Khrebtukova, I.4
Zhang, L.5
-
33
-
-
35349017950
-
Transcriptome analysis of trichothecene-induced gene expression in barley
-
Boddu J, Cho S, Muehlbauer GJ, (2007) Transcriptome analysis of trichothecene-induced gene expression in barley. Mol Plant Microbe Interact 20: 1364-1375.
-
(2007)
Mol Plant Microbe Interact
, vol.20
, pp. 1364-1375
-
-
Boddu, J.1
Cho, S.2
Muehlbauer, G.J.3
-
34
-
-
68949150692
-
Disease-specific expression of host genes during downy mildew infection of Arabidopsis
-
Huibers RP, de Jong M, Dekter RW, Van den Ackerveken G, (2009) Disease-specific expression of host genes during downy mildew infection of Arabidopsis. Mol Plant Microbe Interact 22: 1104-1115.
-
(2009)
Mol Plant Microbe Interact
, vol.22
, pp. 1104-1115
-
-
Huibers, R.P.1
de Jong, M.2
Dekter, R.W.3
van den Ackerveken, G.4
-
35
-
-
77949404966
-
Primary metabolism of chickpea is the initial target of wound inducing early sensed Fusarium oxysporum f. sp
-
Gupta S, Chakraborti D, Sengupta A, Basu D, Das S, (2010) Primary metabolism of chickpea is the initial target of wound inducing early sensed Fusarium oxysporum f. sp. ciceri race I. PLoS ONE 5: e9030.
-
(2010)
Ciceri Race I. PLoS ONE
, vol.5
-
-
Gupta, S.1
Chakraborti, D.2
Sengupta, A.3
Basu, D.4
Das, S.5
-
36
-
-
84860211279
-
RNA-Seq Analysis of the Pseudoperonospora cubensis transcriptome during cucumber (Cucumis sativus L.) infection
-
In press
-
Savory EA, Adhikari BN, Hamilton JP, Vaillancourt B, Buell CR, et al. (2012) RNA-Seq Analysis of the Pseudoperonospora cubensis transcriptome during cucumber (Cucumis sativus L.) infection. PLoS One. In press.
-
(2012)
PLoS One
-
-
Savory, E.A.1
Adhikari, B.N.2
Hamilton, J.P.3
Vaillancourt, B.4
Buell, C.R.5
-
37
-
-
77956095798
-
Hyaloperonospora arabidopsidis as a pathogen model
-
Coates ME, Beynon JL, (2010) Hyaloperonospora arabidopsidis as a pathogen model. Ann Rev Phytopathol 48: 329-345.
-
(2010)
Ann Rev Phytopathol
, vol.48
, pp. 329-345
-
-
Coates, M.E.1
Beynon, J.L.2
-
39
-
-
79751526181
-
Identification and transcriptional profiling of differentially expressed genes associated with resistance to Pseudoperonospora cubensis in cucumber
-
Li JW, Liu J, Zhang H, Xie CH, (2011) Identification and transcriptional profiling of differentially expressed genes associated with resistance to Pseudoperonospora cubensis in cucumber. Plant Cell Rep 30: 345-357.
-
(2011)
Plant Cell Rep
, vol.30
, pp. 345-357
-
-
Li, J.W.1
Liu, J.2
Zhang, H.3
Xie, C.H.4
-
40
-
-
79956038962
-
From perception to activation: The molecular-genetic and biochemical landscape of disease resistance signaling in plants
-
Knepper C, Day B, (2010) From perception to activation: The molecular-genetic and biochemical landscape of disease resistance signaling in plants. The Arabidopsis Book.
-
(2010)
The Arabidopsis Book
-
-
Knepper, C.1
Day, B.2
-
41
-
-
79551662808
-
Timing of plant immune responses by a central circadian regulator
-
Wang W, Barnaby JY, Tada Y, Li H, Tor M, et al. (2011) Timing of plant immune responses by a central circadian regulator. Nature 470: 110-114.
-
(2011)
Nature
, vol.470
, pp. 110-114
-
-
Wang, W.1
Barnaby, J.Y.2
Tada, Y.3
Li, H.4
Tor, M.5
-
42
-
-
68949150692
-
Disease-specific expression of host genes during downy mildew infection of Arabidopsis
-
Huibers RP, de Jong M, Dekter RW, Van den Ackerveken G, (2009) Disease-specific expression of host genes during downy mildew infection of Arabidopsis. Mol Plant Microbe Interact 22: 1104-1115.
-
(2009)
Mol Plant Microbe Interact
, vol.22
, pp. 1104-1115
-
-
Huibers, R.P.1
de Jong, M.2
Dekter, R.W.3
van den Ackerveken, G.4
-
43
-
-
34250621983
-
The transcriptional response of hybrid poplar (Populus trichocarpa x P. deltoides) to infection by Melampsora medusae leaf rust involves induction of flavonoid pathway genes leading to the accumulation of proanthocyanidins
-
Miranda M, Ralph SG, Mellway R, White R, Heath MC, et al. (2007) The transcriptional response of hybrid poplar (Populus trichocarpa x P. deltoides) to infection by Melampsora medusae leaf rust involves induction of flavonoid pathway genes leading to the accumulation of proanthocyanidins. Mol Plant Microbe Interact 20: 816-831.
-
(2007)
Mol Plant Microbe Interact
, vol.20
, pp. 816-831
-
-
Miranda, M.1
Ralph, S.G.2
Mellway, R.3
White, R.4
Heath, M.C.5
-
44
-
-
77949439770
-
General and species-specific transcriptional responses to downy mildew infection in a susceptible (Vitis vinifera) and a resistant (V. riparia) grapevine species
-
Polesani M, Bortesi L, Ferrarini A, Zamboni A, Fasoli M, et al. (2010) General and species-specific transcriptional responses to downy mildew infection in a susceptible (Vitis vinifera) and a resistant (V. riparia) grapevine species. BMC Gen 11: 117.
-
(2010)
BMC Gen
, vol.11
, pp. 117
-
-
Polesani, M.1
Bortesi, L.2
Ferrarini, A.3
Zamboni, A.4
Fasoli, M.5
-
45
-
-
42149140539
-
cDNA-AFLP analysis of plant and pathogen genes expressed in grapevine infected with Plasmopara viticola
-
Polesani M, Desario F, Ferrarini A, Zamboni A, Pezzotti M, et al. (2008) cDNA-AFLP analysis of plant and pathogen genes expressed in grapevine infected with Plasmopara viticola. BMC Genomics 9: 142.
-
(2008)
BMC Genomics
, vol.9
, pp. 142
-
-
Polesani, M.1
Desario, F.2
Ferrarini, A.3
Zamboni, A.4
Pezzotti, M.5
-
46
-
-
45849094452
-
Transcriptome of Aphanomyces euteiches: new oomycete putative pathogenicity factors and metabolic pathways
-
Gaulin E, Madoui MA, Bottin A, Jacquet C, Mathe C, et al. (2008) Transcriptome of Aphanomyces euteiches: new oomycete putative pathogenicity factors and metabolic pathways. PLoS ONE 3: e1723.
-
(2008)
PLoS ONE
, vol.3
-
-
Gaulin, E.1
Madoui, M.A.2
Bottin, A.3
Jacquet, C.4
Mathe, C.5
-
47
-
-
40049099114
-
Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R. Bioinformatics
-
Langfelder P, Zhang B, Horvath S, (2008) Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R. Bioinformatics 24: 719-720.
-
(2008)
, vol.24
, pp. 719-720
-
-
Langfelder, P.1
Zhang, B.2
Horvath, S.3
-
48
-
-
23944458138
-
A general framework for weighted gene co-expression network analysis
-
Zhang B, Horvath S, (2005) A general framework for weighted gene co-expression network analysis. Stat App Gen Mol Biol 4: Article 17.
-
(2005)
Stat App Gen Mol Biol 4: Article
, vol.17
-
-
Zhang, B.1
Horvath, S.2
-
49
-
-
41449085571
-
Eigengene networks for studying the relationships between co-expression modules
-
Langfelder P, Horvath S, (2007) Eigengene networks for studying the relationships between co-expression modules. BMC Sys Biol 1: 54.
-
(2007)
BMC Sys Biol
, vol.1
, pp. 54
-
-
Langfelder, P.1
Horvath, S.2
-
50
-
-
33847317321
-
Lipoxygenase in fruits and vegetables: A review
-
Takemoto D, Demirdöven A, (2007) Lipoxygenase in fruits and vegetables: A review. Enz Micro Tech 40: 491-496.
-
(2007)
Enz Micro Tech
, vol.40
, pp. 491-496
-
-
Takemoto, D.1
Demirdöven, A.2
-
51
-
-
0035543162
-
Vascular defense responses in rice: peroxidase accumulation in xylem parenchyma cells and xylem wall thickening
-
Hilaire E, Young SA, Willard LH, McGee JD, Sweat T, et al. (2001) Vascular defense responses in rice: peroxidase accumulation in xylem parenchyma cells and xylem wall thickening. Mol Plant Microbe Interact 14: 1411-1419.
-
(2001)
Mol Plant Microbe Interact
, vol.14
, pp. 1411-1419
-
-
Hilaire, E.1
Young, S.A.2
Willard, L.H.3
McGee, J.D.4
Sweat, T.5
-
52
-
-
80455144695
-
Molecular and biochemical basis for stress-induced accumulation of free and bound p-coumaraldehyde in cucumber
-
Varbanova M, Porter K, Lu F, Ralph J, Hammerschmidt R, et al. (2011) Molecular and biochemical basis for stress-induced accumulation of free and bound p-coumaraldehyde in cucumber. Plant Physiol 157: 1056-1066.
-
(2011)
Plant Physiol
, vol.157
, pp. 1056-1066
-
-
Varbanova, M.1
Porter, K.2
Lu, F.3
Ralph, J.4
Hammerschmidt, R.5
-
53
-
-
34247390566
-
The MAP kinase kinase MKK2 affects disease resistance in Arabidopsis
-
Brader G, Djamei A, Teige M, Palva ET, Hirt H, (2007) The MAP kinase kinase MKK2 affects disease resistance in Arabidopsis. Mol Plant Microbe Interact 20: 589-596.
-
(2007)
Mol Plant Microbe Interact
, vol.20
, pp. 589-596
-
-
Brader, G.1
Djamei, A.2
Teige, M.3
Palva, E.T.4
Hirt, H.5
-
54
-
-
57749094835
-
RD19, an Arabidopsis cysteine protease required for RRS1-R-mediated resistance, Is relocalized to the nucleus by the Ralstonia solanacearum PopP2 effector
-
Bernoux M, Timmers T, Jauneau A, Brière C, de Wit PJGM, et al. (2008) RD19, an Arabidopsis cysteine protease required for RRS1-R-mediated resistance, Is relocalized to the nucleus by the Ralstonia solanacearum PopP2 effector. Plant Cell 20: 2252-2264.
-
(2008)
Plant Cell
, vol.20
, pp. 2252-2264
-
-
Bernoux, M.1
Timmers, T.2
Jauneau, A.3
Brière, C.4
de Wit, P.J.G.M.5
-
55
-
-
0041538597
-
Characterization of elicitor-inducible tobacco genes isolated by differential hybridization
-
Takemoto D, Doke N, Kawakita K, (2001) Characterization of elicitor-inducible tobacco genes isolated by differential hybridization. J Gen Plant Pathol 67: 89-96.
-
(2001)
J Gen Plant Pathol
, vol.67
, pp. 89-96
-
-
Takemoto, D.1
Doke, N.2
Kawakita, K.3
-
56
-
-
65449136284
-
TopHat: discovering splice junctions with RNA-Seq
-
Trapnell C, Pachter L, Salzberg SL, (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
57
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B, Trapnell C, Pop M, Salzberg S, (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology 10: R25.
-
(2009)
Genome Biology
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.4
-
58
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, et al. (2010) Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol 28: 511-515.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 511-515
-
-
Trapnell, C.1
Williams, B.A.2
Pertea, G.3
Mortazavi, A.4
Kwan, G.5
-
59
-
-
77949481052
-
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments
-
Bullard J, Purdom E, Hansen K, Dudoit S, (2010) Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments. BMC Bioinformatics 11: 94.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 94
-
-
Bullard, J.1
Purdom, E.2
Hansen, K.3
Dudoit, S.4
-
60
-
-
33747894577
-
TM4 microarray software suite
-
Saeed AI, Bhagabati NK, Braisted JC, Liang W, Sharov V, et al. (2006) TM4 microarray software suite. Methods Enzymol 411: 134-193.
-
(2006)
Methods Enzymol
, vol.411
, pp. 134-193
-
-
Saeed, A.I.1
Bhagabati, N.K.2
Braisted, J.C.3
Liang, W.4
Sharov, V.5
-
61
-
-
0036081355
-
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
-
Edgar R, Domrachev M, Lash AE, (2002) Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 30: 207-210.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 207-210
-
-
Edgar, R.1
Domrachev, M.2
Lash, A.E.3
-
62
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, et al. (2003) Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostat 4: 249-264.
-
(2003)
Biostat
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
Antonellis, K.J.5
-
63
-
-
0141519279
-
OrthoMCL: identification of ortholog groups for eukaryotic genomes
-
Li L, Stoeckert CJ Jr, Roos DS, (2003) OrthoMCL: identification of ortholog groups for eukaryotic genomes. Genome Res 13: 2178-2189.
-
(2003)
Genome Res
, vol.13
, pp. 2178-2189
-
-
Li, L.1
Stoeckert Jr., C.J.2
Roos, D.S.3
-
64
-
-
34347388470
-
UniRef: comprehensive and non-redundant UniProt reference clusters
-
Suzek BE, Huang H, McGarvey P, Mazumder R, Wu CH, (2007) UniRef: comprehensive and non-redundant UniProt reference clusters. Bioinformatics 23: 1282-1288.
-
(2007)
Bioinformatics
, vol.23
, pp. 1282-1288
-
-
Suzek, B.E.1
Huang, H.2
McGarvey, P.3
Mazumder, R.4
Wu, C.H.5
-
65
-
-
0033976458
-
The Pfam Protein Families Database
-
Bateman A, Birney E, Durbin R, Eddy SR, Howe KL, et al. (2000) The Pfam Protein Families Database. Nucleic Acids Res 28: 263-266.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 263-266
-
-
Bateman, A.1
Birney, E.2
Durbin, R.3
Eddy, S.R.4
Howe, K.L.5
|