Transcriptomic and proteomic analyses of Desulfovibrio vulgaris biofilms: Carbon and energy flow contribute to the distinct biofilm growth state

BMC Genomics

Volumn 13, Issue 1, 2012, Pages

  Clark, Melinda E ^a,b   He, Zhili ^c,g   Redding, Alyssa M ^d   Joachimiak, Marcin P ^d,g   Keasling, Jay D ^d,e,f,g   Zhou, Jizhong Z ^c,g   Arkin, Adam P ^d,f,g   Mukhopadhyay, Aindrila ^d,g   Fields, Matthew W ^b,g  

^a MIAMI UNIVERSITY   (United States)

^b MONTANA STATE UNIVERSITY   (United States)

^c UNIVERSITY OF OKLAHOMA   (United States)

^d LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f University of California at Berkeley   (United States)

^g Environmental Networks Integrated with Molecular Assemblies   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; FERREDOXIN NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE REDUCTASE; FORMATE DEHYDROGENASE; HYDROGENASE; LACTOSE PERMEASE; MESSENGER RNA; BACTERIAL PROTEIN; CARBON; LACTIC ACID; RIBOSOME PROTEIN; SULFATE;

AMINO ACID METABOLISM; ARTICLE; BACTERIAL CELL; BACTERIAL GENE; BIOFILM; BIOFILM REACTOR; CONTROLLED STUDY; COO GENE; DESULFOVIBRIO VULGARIS; ECH GENE; ENERGY CONSERVATION; ENERGY CONVERSION; ENZYME ACTIVITY; FUNCTIONAL GENOMICS; GENOME ANALYSIS; HYP GENE; INTRACELLULAR SIGNALING; NITROGEN UTILIZATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANKTON; PROTEOMICS; RNF GENE; SULFATE REDUCING BACTERIUM; TRANSCRIPTOMICS; UPREGULATION; BIOLOGICAL MODEL; BIOREACTOR; CARBOHYDRATE METABOLISM; CLUSTER ANALYSIS; CONFOCAL MICROSCOPY; CYTOLOGY; DRUG EFFECT; ENERGY METABOLISM; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; METHODOLOGY; MICROBIOLOGY; PHYSIOLOGY; PRINCIPAL COMPONENT ANALYSIS;

BACTERIA (MICROORGANISMS); DESULFOVIBRIO VULGARIS; DESULFOVIBRIO VULGARIS SUBSP. VULGARIS STR. HILDENBOROUGH;

BACTERIAL PROTEINS; BIOFILMS; BIOREACTORS; CARBOHYDRATE METABOLISM; CARBON; CLUSTER ANALYSIS; DESULFOVIBRIO VULGARIS; ENERGY METABOLISM; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, BACTERIAL; LACTIC ACID; MICROSCOPY, CONFOCAL; MODELS, BIOLOGICAL; PLANKTON; PRINCIPAL COMPONENT ANALYSIS; PROTEOMICS; RIBOSOMAL PROTEINS; RNA, MESSENGER; SULFATES;

EID: 84859706260     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-138     Document Type: Article

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