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Volumn 24, Issue 9, 2008, Pages 1775-1784

Phylogenetic characterization of bacterial consortia obtained of corroding gas pipelines in Mexico

Author keywords

16S rRNA gene; Bacterial community; Biocorrosion; Gas pipeline

Indexed keywords

BACTERIA; BACTERIOLOGY; BIOFILMS; BIOFILTERS; CORROSION; FORMING; GAS PIPELINES; GASES; IRON; METALS; NATURAL GAS PIPELINES; NATURAL GAS TRANSPORTATION; PITTING; STEEL; STEEL CORROSION; SULFATE MINERALS;

EID: 48349147208     PISSN: 09593993     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11274-008-9674-x     Document Type: Article
Times cited : (33)

References (60)
  • 1
    • 0033039009 scopus 로고    scopus 로고
    • Development of a pH gradient within a biofilm is dependent upon the limiting nutrient
    • VJM Allan LE Macaskie ME Callow 1999 Development of a pH gradient within a biofilm is dependent upon the limiting nutrient Biotechnol Lett 21 407 413
    • (1999) Biotechnol Lett , vol.21 , pp. 407-413
    • Allan, V.J.M.1    MacAskie, L.E.2    Callow, M.E.3
  • 3
    • 0035544762 scopus 로고    scopus 로고
    • New strain of anaerobic bacteria and its association with corrosion pitting of X52 pipeline steel
    • C Angeles-Chavez JM Romero M Amaya L Martinez R Perez 2001 New strain of anaerobic bacteria and its association with corrosion pitting of X52 pipeline steel Br Corros J 36 292 296
    • (2001) Br Corros J , vol.36 , pp. 292-296
    • Angeles-Chavez, C.1    Romero, J.M.2    Amaya, M.3    Martinez, L.4    Perez, R.5
  • 5
    • 0017819828 scopus 로고
    • Growth yields and growth rates of Desulfovibrio vulgaris (Marburg) growing on hydrogen and sulfate and hydrogen and thiosulfate as sole energy sources
    • W Badziong RK Thauer 1978 Growth yields and growth rates of Desulfovibrio vulgaris (Marburg) growing on hydrogen and sulfate and hydrogen and thiosulfate as sole energy sources Arch Microbiol 117 209 214
    • (1978) Arch Microbiol , vol.117 , pp. 209-214
    • Badziong, W.1    Thauer, R.K.2
  • 7
    • 0023258583 scopus 로고
    • Tetrathionate reduction and production of hydrogen sulfide from thiosulfate
    • EL Barett MA Clark 1987 Tetrathionate reduction and production of hydrogen sulfide from thiosulfate Microbiol Rev 51 192 205
    • (1987) Microbiol Rev , vol.51 , pp. 192-205
    • Barett, E.L.1    Clark, M.A.2
  • 8
    • 43849112832 scopus 로고    scopus 로고
    • Sulphate-reducing bacteria and their role in corrosion of ferrous materials
    • Barton LL, Hamilton WA (eds) Cambridge University Press, Cambridge
    • Beech IB, Sunner JA (2007) Sulphate-reducing bacteria and their role in corrosion of ferrous materials. In: Barton LL, Hamilton WA (eds) Sulphate-reducing bacteria: environmental and engineered systems, Cambridge University Press, Cambridge, pp 459-483
    • (2007) Sulphate-reducing Bacteria: Environmental and Engineered Systems , pp. 459-483
    • Beech, I.B.1    Sunner, J.A.2
  • 9
    • 50749135302 scopus 로고
    • Study of parameters implicated in the biodeterioration of mild steel in the presence of different species of sulphate-reducing bacteria
    • IB Beech CWS Cheung CSP Chan MA Hill R Franco AR Lino 1994 Study of parameters implicated in the biodeterioration of mild steel in the presence of different species of sulphate-reducing bacteria Int Biodet Biodeg 34 289 303
    • (1994) Int Biodet Biodeg , vol.34 , pp. 289-303
    • Beech, I.B.1    Cheung, C.W.S.2    Chan, C.S.P.3    Hill, M.A.4    Franco, R.5    Lino, A.R.6
  • 10
    • 33845667977 scopus 로고    scopus 로고
    • Both sulfate-reducing bacteria and Enterobacteriaceae take part in marine biocorrosion of carbon steel
    • D Bermont-Bouis M Janvier PA Grimont I Dupont T Vallaeys 2007 Both sulfate-reducing bacteria and Enterobacteriaceae take part in marine biocorrosion of carbon steel J Appl Microbiol 102 161 168
    • (2007) J Appl Microbiol , vol.102 , pp. 161-168
    • Bermont-Bouis, D.1    Janvier, M.2    Grimont, P.A.3    Dupont, I.4    Vallaeys, T.5
  • 11
    • 0033951689 scopus 로고    scopus 로고
    • The effect of the growth medium on the composition and metal binding behaviour of the extracellular polymeric material of a metal-accumulating Citrobacter sp
    • KM Bonthrone J Quarmby CJ Hewitt VMJ Allan M Paterson-Beedle JF Kennedy LE Macaskie 2000 The effect of the growth medium on the composition and metal binding behaviour of the extracellular polymeric material of a metal-accumulating Citrobacter sp Environ Technol 21 123 134
    • (2000) Environ Technol , vol.21 , pp. 123-134
    • Bonthrone, K.M.1    Quarmby, J.2    Hewitt, C.J.3    Allan, V.M.J.4    Paterson-Beedle, M.5    Kennedy, J.F.6    MacAskie, L.E.7
  • 12
    • 0026018239 scopus 로고
    • Effect of hydrogenase and mixed sulfate-reducing bacterial populations on the corrosion of steel
    • RD Bryant W Jansen J Boivin EJ Laishley JW Costerton 1991 Effect of hydrogenase and mixed sulfate-reducing bacterial populations on the corrosion of steel Appl Environ Microbiol 57 2804 2809
    • (1991) Appl Environ Microbiol , vol.57 , pp. 2804-2809
    • Bryant, R.D.1    Jansen, W.2    Boivin, J.3    Laishley, E.J.4    Costerton, J.W.5
  • 13
    • 0347823003 scopus 로고    scopus 로고
    • MatGAT: An application that generates similarity/identity matrices using protein or DNA sequences
    • JJ Campanella L Bitincka J Smalley 2003 MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences BMC Bioinformatics 4 29
    • (2003) BMC Bioinformatics , vol.4 , pp. 29
    • Campanella, J.J.1    Bitincka, L.2    Smalley, J.3
  • 16
    • 0032145986 scopus 로고    scopus 로고
    • Simple and rapid method for direct extraction of microbial DNA from soil to PCR
    • DW Cullen PR Hirsch 1998 Simple and rapid method for direct extraction of microbial DNA from soil to PCR Soil Biol Biochem 30 983 993
    • (1998) Soil Biol Biochem , vol.30 , pp. 983-993
    • Cullen, D.W.1    Hirsch, P.R.2
  • 17
    • 0027562741 scopus 로고
    • Microbial reduction of sulfur dioxide with pretreated sewage sludge and elemental hydrogen as electron donors
    • Deshmane V, Lee CM, Sublette KL (1993) Microbial reduction of sulfur dioxide with pretreated sewage sludge and elemental hydrogen as electron donors. Appl Biochem Biotechnol 39-40:739-752
    • (1993) Appl Biochem Biotechnol , vol.39-40 , pp. 739-752
    • Deshmane, V.1    Lee, C.M.2    Sublette, K.L.3
  • 19
    • 0031468818 scopus 로고    scopus 로고
    • The relationship between microbial metabolic activity and biocorrosion of carbon steel
    • Z Dzierzewicz B Cwalina E Chodurek T Wilczok 1997 The relationship between microbial metabolic activity and biocorrosion of carbon steel Res Microbiol 148 785 793
    • (1997) Res Microbiol , vol.148 , pp. 785-793
    • Dzierzewicz, Z.1    Cwalina, B.2    Chodurek, E.3    Wilczok, T.4
  • 20
    • 0036693310 scopus 로고    scopus 로고
    • Planktonic nitrate reducing bacteria and sulfate-reducing bacteria in some western Canadian oil field waters
    • RE Eckford PM Fedorak 2002 Planktonic nitrate reducing bacteria and sulfate-reducing bacteria in some western Canadian oil field waters J Ind Microbiol Biotechnol 29 83 92
    • (2002) J Ind Microbiol Biotechnol , vol.29 , pp. 83-92
    • Eckford, R.E.1    Fedorak, P.M.2
  • 21
    • 0032462270 scopus 로고    scopus 로고
    • Geomicrobiology: Its significance for geology
    • HL Ehrlich 1998 Geomicrobiology: its significance for geology Earth Sci Rev 45 45 60
    • (1998) Earth Sci Rev , vol.45 , pp. 45-60
    • Ehrlich, H.L.1
  • 23
    • 0037052487 scopus 로고    scopus 로고
    • Microbial behavior in a heterogeneous world
    • T Fenchel 2002 Microbial behavior in a heterogeneous world Science 296 1068 1071
    • (2002) Science , vol.296 , pp. 1068-1071
    • Fenchel, T.1
  • 26
    • 0030464460 scopus 로고    scopus 로고
    • SEA VIEW and PHYLO_WIN, two graphic tools for sequence alignment and molecular phylogeny
    • N Galtier Gouy C Gautier 1996 SEA VIEW and PHYLO_WIN, two graphic tools for sequence alignment and molecular phylogeny Comput Applic Biosci 12 543 548
    • (1996) Comput Applic Biosci , vol.12 , pp. 543-548
    • Galtier, N.1    Gouy2    Gautier, C.3
  • 27
    • 0027185035 scopus 로고
    • Environmental scanning electron microscope (ESEM) evaluation of crystal and plaque formation associated with biocorrosion
    • SL Geiger TJ Ross LL Barton 1993 Environmental scanning electron microscope (ESEM) evaluation of crystal and plaque formation associated with biocorrosion Microsc Res Techniq 25 429 433
    • (1993) Microsc Res Techniq , vol.25 , pp. 429-433
    • Geiger, S.L.1    Ross, T.J.2    Barton, L.L.3
  • 28
    • 0037315590 scopus 로고    scopus 로고
    • Microbially influenced corrosion as a model for the study of metal microbe interactions: A unifying electron transfer hypothesis
    • WA Hamilton 2003 Microbially influenced corrosion as a model for the study of metal microbe interactions: a unifying electron transfer hypothesis Biofouling 19 65 76
    • (2003) Biofouling , vol.19 , pp. 65-76
    • Hamilton, W.A.1
  • 29
    • 0036742280 scopus 로고    scopus 로고
    • Clostridium thiosulfatireducens sp. nov., a proteolytic, thiosulfate- and sulfur-reducing bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor
    • G Hernández-Eugenio ML Fardeau JL Cayol BK Patel P Thomas H Macarie JL Garcia B Ollivier 2002 Clostridium thiosulfatireducens sp. nov., a proteolytic, thiosulfate- and sulfur-reducing bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor Int J Syst Evol Microbiol 52 1461 1468
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1461-1468
    • Hernández-Eugenio, G.1    Fardeau, M.L.2    Cayol, J.L.3    Patel, B.K.4    Thomas, P.5    MacArie, H.6    Garcia, J.L.7    Ollivier, B.8
  • 30
    • 0036277552 scopus 로고    scopus 로고
    • In-situ assessment of active Thiobacillus species in corroding concrete sewers using fluorescent RNA probes
    • M Hernandez EA Marchand DJ Roberts J Peccia 2002 In-situ assessment of active Thiobacillus species in corroding concrete sewers using fluorescent RNA probes Biodeterior Biodegration 49 274 286
    • (2002) Biodeterior Biodegration , vol.49 , pp. 274-286
    • Hernandez, M.1    Marchand, E.A.2    Roberts, D.J.3    Peccia, J.4
  • 31
    • 12044253190 scopus 로고
    • An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
    • DM Hillis JJ Bull 1993 An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis Syst Biol 42 182 192
    • (1993) Syst Biol , vol.42 , pp. 182-192
    • Hillis, D.M.1    Bull, J.J.2
  • 32
    • 0015451193 scopus 로고
    • On the taxonomy and fine structure of some hyperthermophilic saccharolytic clostridia
    • F Hollaus U Sleytr 1972 On the taxonomy and fine structure of some hyperthermophilic saccharolytic clostridia Arch Microbiol 86 129 146
    • (1972) Arch Microbiol , vol.86 , pp. 129-146
    • Hollaus, F.1    Sleytr, U.2
  • 34
    • 3142770575 scopus 로고    scopus 로고
    • Phylogenetic characterization of a corrosive consortium isolated from a sour gas pipeline
    • J Jan-Roblero JM Romero M Amaya S Le Borgne 2004 Phylogenetic characterization of a corrosive consortium isolated from a sour gas pipeline Appl Microbiol Biotechnol 64 862 867
    • (2004) Appl Microbiol Biotechnol , vol.64 , pp. 862-867
    • Jan-Roblero, J.1    Romero, J.M.2    Amaya, M.3    Le Borgne, S.4
  • 35
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • M Kimura 1980 A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences J Mol Evol 16 111 120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 36
    • 0029392438 scopus 로고
    • Extraction and purification of microbial DNA from petroleum contaminated soils and detection of low number of toluene, octane and pesticide degraders by multiple polymerase chain reaction and Southern analysis
    • DB Knaebel RL Crawford 1995 Extraction and purification of microbial DNA from petroleum contaminated soils and detection of low number of toluene, octane and pesticide degraders by multiple polymerase chain reaction and Southern analysis Mol Ecol 4 579 591
    • (1995) Mol Ecol , vol.4 , pp. 579-591
    • Knaebel, D.B.1    Crawford, R.L.2
  • 37
    • 0024725772 scopus 로고
    • Hydrogen production from glucose by Citrobacter freundii.
    • GR Kumar TM Vatsala 1989 Hydrogen production from glucose by Citrobacter freundii. Indian J Exp Biol 27 824 825
    • (1989) Indian J Exp Biol , vol.27 , pp. 824-825
    • Kumar, G.R.1    Vatsala, T.M.2
  • 38
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • S Kumar K Tamura M Nei 2004 MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment Brief Bioinform 5 150 163
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 40
    • 0029132531 scopus 로고
    • Role of sulfate-reducing bacteria in corrosion of mild steel: A review
    • W Lee Z Lewandowski PH Nielsen WA Hamilton 1995 Role of sulfate-reducing bacteria in corrosion of mild steel: a review Biofouling 8 165 194
    • (1995) Biofouling , vol.8 , pp. 165-194
    • Lee, W.1    Lewandowski, Z.2    Nielsen, P.H.3    Hamilton, W.A.4
  • 41
    • 0031815646 scopus 로고    scopus 로고
    • Identification and phylogenetic analysis of thermophilic sulfate-reducing bacteria in oil field samples by 16S rDNA gene cloning and sequencing
    • JY Leu CP McGovern-Traa AJ Porter WJ Harris WA Hamilton 1998 Identification and phylogenetic analysis of thermophilic sulfate-reducing bacteria in oil field samples by 16S rDNA gene cloning and sequencing Anaerobe 4 165 174
    • (1998) Anaerobe , vol.4 , pp. 165-174
    • Leu, J.Y.1    McGovern-Traa, C.P.2    Porter, A.J.3    Harris, W.J.4    Hamilton, W.A.5
  • 42
    • 0011940538 scopus 로고    scopus 로고
    • Relationship between corrosion and the biological sulfur cycle: A review
    • BJ Little RI Ray RK Pope 2000 Relationship between corrosion and the biological sulfur cycle: a review Corrosion 56 433 443
    • (2000) Corrosion , vol.56 , pp. 433-443
    • Little, B.J.1    Ray, R.I.2    Pope, R.K.3
  • 45
    • 77956852564 scopus 로고
    • Microbial reduction of iron, manganese, and other metals
    • DR Lovley 1995 Microbial reduction of iron, manganese, and other metals Adv Agronomy 54 175 231
    • (1995) Adv Agronomy , vol.54 , pp. 175-231
    • Lovley, D.R.1
  • 47
    • 33744829234 scopus 로고    scopus 로고
    • Characterization of bacterial community associated to biofilms of corroded oil pipelines from the southeast of Mexico
    • I Neria-Gonzalez ET Wang F Ramirez JM Romero C Hernandez-Rodriguez 2006 Characterization of bacterial community associated to biofilms of corroded oil pipelines from the southeast of Mexico Anaerobe 12 122 133
    • (2006) Anaerobe , vol.12 , pp. 122-133
    • Neria-Gonzalez, I.1    Wang, E.T.2    Ramirez, F.3    Romero, J.M.4    Hernandez-Rodriguez, C.5
  • 50
    • 0000011359 scopus 로고
    • Universal bacterial 16S rRNA amplification and sequencing
    • Persing DH, Smith TF, Tenover FC, White TJ (eds) ASM Press, Washington DC
    • Relman DA (1993) Universal bacterial 16S rRNA amplification and sequencing. In: Persing DH, Smith TF, Tenover FC, White TJ (eds) Diagnostic molecular microbiology: principles and applications. ASM Press, Washington DC, pp 489-495
    • (1993) Diagnostic Molecular Microbiology: Principles and Applications , pp. 489-495
    • Relman, D.A.1
  • 52
    • 0003252192 scopus 로고    scopus 로고
    • Plasmids and their usefulness in molecular cloning
    • Cold Spring Harbor Laboratory Press, New York
    • Sambrook J, Rusell DW (2001) Plasmids and their usefulness in molecular cloning. Molecular Cloning: a laboratory manual. 3rd ed. Cold Spring Harbor Laboratory Press, New York, pp 1.35-1.37
    • (2001) Molecular Cloning: A Laboratory Manual. 3rd Ed. , pp. 135-137
    • Sambrook, J.1    Rusell, D.W.2
  • 53
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 25 4876 4882
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 54
    • 0004197556 scopus 로고    scopus 로고
    • U.S. Federal Highway Administration (FHWA) Report FHWA-RD-01-156, National Technical Information Service. 5285 Port Royal Road, Springfield, VA 22161
    • U.S. Federal Highway Administration (FHWA) (2002) Corrosion costs and preventive strategies in the United States, Report FHWA-RD-01-156, National Technical Information Service. 5285 Port Royal Road, Springfield, VA 22161
    • (2002) Corrosion Costs and Preventive Strategies in the United States
  • 55
    • 0000616891 scopus 로고
    • Microbiology and ecology of sulfate and sulfur reducing bacteria
    • Wiley New York
    • Widdel F (1988) Microbiology and ecology of sulfate and sulfur reducing bacteria. In: Zehnder AJB (ed) Biology of anaerobic microorganisms. Wiley, New York, pp 469-585
    • (1988) Biology of Anaerobic Microorganisms , pp. 469-585
    • Widdel, F.1    Zehnder, A.J.B.2
  • 56
    • 0033616585 scopus 로고    scopus 로고
    • Vibrio cholerae O1 El Tor: Identification of a gene cluster required for the rugose colony type, exopolysaccharide production, chlorine resistance, and biofilm formation
    • FH Yildiz GK Schoolnik 1999 Vibrio cholerae O1 El Tor: identification of a gene cluster required for the rugose colony type, exopolysaccharide production, chlorine resistance, and biofilm formation Proc Natl Acad Sci USA 96 4028 4033
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 4028-4033
    • Yildiz, F.H.1    Schoolnik, G.K.2
  • 58
    • 0034788847 scopus 로고    scopus 로고
    • Phylogenetic diversity of SRB-rich marine biofilm
    • T Zhang PH Fang 2001 Phylogenetic diversity of SRB-rich marine biofilm Appl Microbiol Biotechnol 57 437 440
    • (2001) Appl Microbiol Biotechnol , vol.57 , pp. 437-440
    • Zhang, T.1    Fang, P.H.2
  • 59
    • 1642440124 scopus 로고    scopus 로고
    • Methanogen population in a marine biofilm corrosive to mild steel
    • T Zhang HHP Fang BCB Ko 2003 Methanogen population in a marine biofilm corrosive to mild steel Appl Microbiol Biotechnol 63 101 106
    • (2003) Appl Microbiol Biotechnol , vol.63 , pp. 101-106
    • Zhang, T.1    Fang, H.H.P.2    Ko, B.C.B.3
  • 60
    • 0141705429 scopus 로고    scopus 로고
    • Characterization of microbial communities in gas industry pipelines
    • XY Zhu J Lubeck II JJ Kilbane 2003 Characterization of microbial communities in gas industry pipelines Appl Environ Microbiol 69 5354 5363
    • (2003) Appl Environ Microbiol , vol.69 , pp. 5354-5363
    • Zhu, X.Y.1    Lubeck, J.2    Jj, I.K.I.3


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