메뉴 건너뛰기




Volumn 109, Issue 15, 2012, Pages 5880-5885

Loss of DNA methylation affects the recombination landscape in Arabidopsis

Author keywords

Chromatin; Epigenetic; Epigenetic recombinant inbred lines; met1 3

Indexed keywords

ARABIDOPSIS; ARTICLE; CENTROMERE; CHROMOSOME; CONTROLLED STUDY; DNA METHYLATION; DNA STRUCTURE; GENE EXPRESSION; GENETIC RECOMBINATION; MEIOSIS; MUTATION; NONHUMAN; PLANT GENOME; PRIORITY JOURNAL; RECOMBINATION REPAIR; WILD TYPE;

EID: 84859570036     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1120841109     Document Type: Article
Times cited : (167)

References (53)
  • 1
    • 78649629549 scopus 로고    scopus 로고
    • Meiosis: Making a break for it
    • Yanowitz J (2010) Meiosis: Making a break for it. Curr Opin Cell Biol 22:744-751.
    • (2010) Curr Opin Cell Biol , vol.22 , pp. 744-751
    • Yanowitz, J.1
  • 2
    • 36549051158 scopus 로고    scopus 로고
    • Chromosome dynamics in meiosis
    • eds Verma DPS, Hong Z (Springer, Heidelberg)
    • Ronceret A, Sheehan M, Pawlowski W (2007) Chromosome dynamics in meiosis. Cell Division Control in Plants, eds Verma DPS, Hong Z (Springer, Heidelberg), pp 103-124.
    • (2007) Cell Division Control in Plants , pp. 103-124
    • Ronceret, A.1    Sheehan, M.2    Pawlowski, W.3
  • 3
    • 42749087226 scopus 로고    scopus 로고
    • Highly integrated single-base resolution maps of the epigenome in Arabidopsis
    • Lister R, et al. (2008) Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell 133:523-536.
    • (2008) Cell , vol.133 , pp. 523-536
    • Lister, R.1
  • 5
    • 81755163109 scopus 로고    scopus 로고
    • Heritable epigenetic variation among maize inbreds
    • Eichten SR, et al. (2011) Heritable epigenetic variation among maize inbreds. PLoS Genet 7:e1002372.
    • (2011) PLoS Genet , vol.7
    • Eichten, S.R.1
  • 6
    • 33845768012 scopus 로고    scopus 로고
    • Recombination: An underappreciated factor in the evolution of plant genomes
    • DOI 10.1038/nrg1970, PII NRG1970
    • Gaut BS, Wright SI, Rizzon C, Dvorak J, Anderson LK (2007) Recombination: An underappreciated factor in the evolution of plant genomes. Nat Rev Genet 8:77-84. (Pubitemid 46006052)
    • (2007) Nature Reviews Genetics , vol.8 , Issue.1 , pp. 77-84
    • Gaut, B.S.1    Wright, S.I.2    Rizzon, C.3    Dvorak, J.4    Anderson, L.K.5
  • 7
    • 73649095856 scopus 로고    scopus 로고
    • Mu transposon insertion sites and meiotic recombination events colocalize with epigenetic marks for open chromatin across the maize genome
    • Liu S, et al. (2009) Mu transposon insertion sites and meiotic recombination events colocalize with epigenetic marks for open chromatin across the maize genome. PLoS Genet 5:e1000733.
    • (2009) PLoS Genet , vol.5
    • Liu, S.1
  • 8
    • 48649103859 scopus 로고    scopus 로고
    • Meiotic chromatin: The substrate for recombination initiation
    • eds Egel R, Lankenau D-H (Springer, Berlin)
    • Lichten M (2008) Meiotic chromatin: The substrate for recombination initiation. Genome Dynamics and Stability, eds Egel R, Lankenau D-H (Springer, Berlin), Vol 3, pp 165-193.
    • (2008) Genome Dynamics and Stability , vol.3 , pp. 165-193
    • Lichten, M.1
  • 9
    • 69849115535 scopus 로고    scopus 로고
    • Distinct histone modifications define initiation and repair of meiotic recombination in the mouse
    • Buard J, Barthès P, Grey C, de Massy B (2009) Distinct histone modifications define initiation and repair of meiotic recombination in the mouse. EMBO J 28:2616-2624.
    • (2009) EMBO J , vol.28 , pp. 2616-2624
    • Buard, J.1    Barthès, P.2    Grey, C.3    De Massy, B.4
  • 10
    • 76749170346 scopus 로고    scopus 로고
    • PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice
    • Baudat F, et al. (2010) PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice. Science 327:836-840.
    • (2010) Science , vol.327 , pp. 836-840
    • Baudat, F.1
  • 11
    • 77952837863 scopus 로고    scopus 로고
    • Histone hyperacetylation affects meiotic recombination and chromosome segregation in Arabidopsis
    • Perrella G, et al. (2010) Histone hyperacetylation affects meiotic recombination and chromosome segregation in Arabidopsis. Plant J 62:796-806.
    • (2010) Plant J , vol.62 , pp. 796-806
    • Perrella, G.1
  • 13
    • 79956066320 scopus 로고    scopus 로고
    • Integrative epigenomic mapping defines four main chromatin states in Arabidopsis
    • Roudier F, et al. (2011) Integrative epigenomic mapping defines four main chromatin states in Arabidopsis. EMBO J 30:1928-1938.
    • (2011) EMBO J , vol.30 , pp. 1928-1938
    • Roudier, F.1
  • 15
    • 0038670503 scopus 로고    scopus 로고
    • Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis
    • DOI 10.1038/ng1138
    • Saze H, Mittelsten Scheid O, Paszkowski J (2003) Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis. Nat Genet 34:65-69. (Pubitemid 36548792)
    • (2003) Nature Genetics , vol.34 , Issue.1 , pp. 65-69
    • Saze, H.1    Scheid, O.M.2    Paszkowski, J.3
  • 16
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law JA, Jacobsen SE (2010) Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11:204-220.
    • (2010) Nat Rev Genet , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 17
    • 0032939382 scopus 로고    scopus 로고
    • Meiotically and mitotically stable inheritance of DNA hypomethylation induced by ddm1 mutation of Arabidopsis thaliana
    • Kakutani T, Munakata K, Richards EJ, Hirochika H (1999) Meiotically and mitotically stable inheritance of DNA hypomethylation induced by ddm1 mutation of Arabidopsis thaliana. Genetics 151:831-838. (Pubitemid 29082948)
    • (1999) Genetics , vol.151 , Issue.2 , pp. 831-838
    • Kakutani, T.1    Munakata, K.2    Richards, E.J.3    Hirochika, H.4
  • 19
    • 62549160981 scopus 로고    scopus 로고
    • A role for RNAi in the selective correction of DNA methylation defects
    • Teixeira FK, et al. (2009) A role for RNAi in the selective correction of DNA methylation defects. Science 323:1600-1604.
    • (2009) Science , vol.323 , pp. 1600-1604
    • Teixeira, F.K.1
  • 20
    • 65249186659 scopus 로고    scopus 로고
    • Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes
    • Reinders J, et al. (2009) Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes. Genes Dev 23:939-950.
    • (2009) Genes Dev , vol.23 , pp. 939-950
    • Reinders, J.1
  • 21
    • 67651227407 scopus 로고    scopus 로고
    • Assessing the impact of transgenerational epigenetic variation on complex traits
    • Johannes F, et al. (2009) Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet 5:e1000530.
    • (2009) PLoS Genet , vol.5
    • Johannes, F.1
  • 22
    • 34548299554 scopus 로고    scopus 로고
    • Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
    • DOI 10.1016/j.cell.2007.07.007, PII S009286740700894X
    • Mathieu O, Reinders J, Caikovski M, Smathajitt C, Paszkowski J (2007) Transgenerational stability of the Arabidopsis epigenome is coordinated by CG methylation. Cell 130:851-862. (Pubitemid 47334929)
    • (2007) Cell , vol.130 , Issue.5 , pp. 851-862
    • Mathieu, O.1    Reinders, J.2    Caikovski, M.3    Smathajitt, C.4    Paszkowski, J.5
  • 23
    • 84859620561 scopus 로고    scopus 로고
    • Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis
    • 10.1073/pnas.1120742109
    • Melamed-Bessudo C, Levy A (2012) Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis. Proc Natl Acad Sci USA, 10.1073/pnas.1120742109.
    • (2012) Proc Natl Acad Sci USA
    • Melamed-Bessudo, C.1    Levy, A.2
  • 24
    • 77952355762 scopus 로고    scopus 로고
    • Genome-wide evolutionary analysis of eukaryotic DNA methylation
    • Zemach A, McDaniel IE, Silva P, Zilberman D (2010) Genome-wide evolutionary analysis of eukaryotic DNA methylation. Science 328:916-919.
    • (2010) Science , vol.328 , pp. 916-919
    • Zemach, A.1    McDaniel, I.E.2    Silva, P.3    Zilberman, D.4
  • 25
    • 77952734605 scopus 로고    scopus 로고
    • Conservation and divergence of methylation patterning in plants and animals
    • Feng S, et al. (2010) Conservation and divergence of methylation patterning in plants and animals. Proc Natl Acad Sci USA 107:8689-8694.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 8689-8694
    • Feng, S.1
  • 26
    • 0030595362 scopus 로고    scopus 로고
    • Interchromosomal transfer of epigenetic states in ascobolus: Transfer of DNA methylation is mechanistically related to homologous recombination
    • DOI 10.1016/S0092-8674(00)80161-0
    • Colot V, Maloisel L, Rossignol JL (1996) Interchromosomal transfer of epigenetic states in Ascobolus: Transfer of DNA methylation is mechanistically related to homologous recombination. Cell 86:855-864. (Pubitemid 26336790)
    • (1996) Cell , vol.86 , Issue.6 , pp. 855-864
    • Colot, V.1    Maloisel, L.2    Rossignol, J.-L.3
  • 27
    • 0032079514 scopus 로고    scopus 로고
    • Suppression of crossing-over by DNA methylation in Ascobolus
    • Maloisel L, Rossignol JL (1998) Suppression of crossing-over by DNA methylation in Ascobolus. Genes Dev 12:1381-1389. (Pubitemid 28213413)
    • (1998) Genes and Development , vol.12 , Issue.9 , pp. 1381-1389
    • Maloisel, L.1    Rossignol, J.-L.2
  • 28
    • 74549137524 scopus 로고    scopus 로고
    • Unlocking the Arabidopsis epigenome
    • Reinders J, Paszkowski J (2009) Unlocking the Arabidopsis epigenome. Epigenetics 4: 557-563.
    • (2009) Epigenetics , vol.4 , pp. 557-563
    • Reinders, J.1    Paszkowski, J.2
  • 29
    • 0041350557 scopus 로고    scopus 로고
    • The Arabidopsis MEI1 gene encodes a protein with five BRCT domains that is involved in meiosis-specific DNA repair events independent of SPO11-induced DSBs
    • Grelon M, Gendrot G, Vezon D, Pelletier G (2003) The Arabidopsis MEI1 gene encodes a protein with five BRCT domains that is involved in meiosis-specific DNA repair events independent of SPO11-induced DSBs. Plant J 35:465-475.
    • (2003) Plant J , vol.35 , pp. 465-475
    • Grelon, M.1    Gendrot, G.2    Vezon, D.3    Pelletier, G.4
  • 30
    • 0242500970 scopus 로고    scopus 로고
    • Two means of transcriptional reactivation within heterochromatin
    • DOI 10.1046/j.1365-313X.2003.01667.x
    • Probst AV, Fransz PF, Paszkowski J, Mittelsten Scheid O (2003) Two means of transcriptional reactivation within heterochromatin. Plant J 33:743-749. (Pubitemid 36325916)
    • (2003) Plant Journal , vol.33 , Issue.4 , pp. 743-749
    • Probst, A.V.1    Fransz, P.F.2    Paszkowski, J.3    Mittelsten, S.O.4
  • 31
    • 39149092490 scopus 로고    scopus 로고
    • The cytogenetics of homologous chromosome pairing in meiosis in plants
    • DOI 10.1159/000121080
    • Bozza CG, Pawlowski WP (2008) The cytogenetics of homologous chromosome pairing in meiosis in plants. Cytogenet Genome Res 120:313-319. (Pubitemid 351738037)
    • (2008) Cytogenetic and Genome Research , vol.120 , Issue.3-4 , pp. 313-319
    • Bozza, C.G.1    Pawlowski, W.P.2
  • 32
    • 33751523649 scopus 로고    scopus 로고
    • Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells
    • DOI 10.1038/ncb1513, PII NCB1513
    • De La Fuente R, et al. (2006) Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells. Nat Cell Biol 8:1448-1454. (Pubitemid 44835121)
    • (2006) Nature Cell Biology , vol.8 , Issue.12 , pp. 1448-1454
    • De La, F.R.1    Baumann, C.2    Fan, T.3    Schmidtmann, A.4    Dobrinski, I.5    Muegge, K.6
  • 34
    • 34547221416 scopus 로고    scopus 로고
    • Functional dynamics of H3K9 methylation during meiotic prophase progression
    • DOI 10.1038/sj.emboj.7601767, PII 7601767
    • Tachibana M, Nozaki M, Takeda N, Shinkai Y (2007) Functional dynamics of H3K9 methylation during meiotic prophase progression. EMBO J 26:3346-3359. (Pubitemid 47123532)
    • (2007) EMBO Journal , vol.26 , Issue.14 , pp. 3346-3359
    • Tachibana, M.1    Nozaki, M.2    Takeda, N.3    Shinkai, Y.4
  • 35
    • 0035211572 scopus 로고    scopus 로고
    • Nucleolus-associated telomere clustering and pairing precede meiotic chromosome synapsis in Arabidopsis thaliana
    • Armstrong SJ, Franklin FC, Jones GH (2001) Nucleolus-associated telomere clustering and pairing precede meiotic chromosome synapsis in Arabidopsis thaliana. J Cell Sci 114:4207-4217. (Pubitemid 33138658)
    • (2001) Journal of Cell Science , vol.114 , Issue.23 , pp. 4207-4217
    • Armstrong, S.J.1    Franklin, F.C.H.2    Jones, G.H.3
  • 36
    • 0036234067 scopus 로고    scopus 로고
    • Crossover interference in arabidopsis
    • Copenhaver GP, Housworth EA, Stahl FW (2002) Crossover interference in Arabidopsis. Genetics 160:1631-1639. (Pubitemid 34454384)
    • (2002) Genetics , vol.160 , Issue.4 , pp. 1631-1639
    • Copenhaver, G.P.1    Housworth, E.A.2    Stahl, F.W.3
  • 37
    • 33846476202 scopus 로고    scopus 로고
    • The road to crossovers: plants have their say
    • DOI 10.1016/j.tig.2006.12.007, PII S0168952506004112
    • Mézard C, Vignard J, Drouaud J, Mercier R (2007) The road to crossovers: Plants have their say. Trends Genet 23:91-99. (Pubitemid 46161218)
    • (2007) Trends in Genetics , vol.23 , Issue.2 , pp. 91-99
    • Mezard, C.1    Vignard, J.2    Drouaud, J.3    Mercier, R.4
  • 38
    • 33746189408 scopus 로고    scopus 로고
    • Crossover Homeostasis in Yeast Meiosis
    • DOI 10.1016/j.cell.2006.05.044, PII S0092867406008592
    • Martini E, Diaz RL, Hunter N, Keeney S (2006) Crossover homeostasis in yeast meiosis. Cell 126:285-295. (Pubitemid 44092965)
    • (2006) Cell , vol.126 , Issue.2 , pp. 285-295
    • Martini, E.1    Diaz, R.L.2    Hunter, N.3    Keeney, S.4
  • 39
    • 79952341174 scopus 로고    scopus 로고
    • Have a break: Determinants of meiotic DNA double strand break (DSB) formation and processing in plants
    • Edlinger B, Schlögelhofer P (2011) Have a break: Determinants of meiotic DNA double strand break (DSB) formation and processing in plants. J Exp Bot 62:1545-1563.
    • (2011) J Exp Bot , vol.62 , pp. 1545-1563
    • Edlinger, B.1    Schlögelhofer, P.2
  • 40
    • 82755170646 scopus 로고    scopus 로고
    • Robust crossover assurance and regulated interhomolog access maintain meiotic crossover number
    • Rosu S, Libuda DE, Villeneuve AM (2011) Robust crossover assurance and regulated interhomolog access maintain meiotic crossover number. Science 334:1286-1289.
    • (2011) Science , vol.334 , pp. 1286-1289
    • Rosu, S.1    Libuda, D.E.2    Villeneuve, A.M.3
  • 42
    • 79957679448 scopus 로고    scopus 로고
    • Epigenetic contribution to stress adaptation in plants
    • Mirouze M, Paszkowski J (2011) Epigenetic contribution to stress adaptation in plants. Curr Opin Plant Biol 14:267-274.
    • (2011) Curr Opin Plant Biol , vol.14 , pp. 267-274
    • Mirouze, M.1    Paszkowski, J.2
  • 43
    • 54149109197 scopus 로고    scopus 로고
    • Epigenome dynamics: A quantitative genetics perspective
    • Johannes F, Colot V, Jansen RC (2008) Epigenome dynamics: A quantitative genetics perspective. Nat Rev Genet 9:883-890.
    • (2008) Nat Rev Genet , vol.9 , pp. 883-890
    • Johannes, F.1    Colot, V.2    Jansen, R.C.3
  • 44
    • 56549102814 scopus 로고    scopus 로고
    • Managing meiotic recombination in plant breeding
    • Wijnker E, de Jong H (2008) Managing meiotic recombination in plant breeding. Trends Plant Sci 13:640-646.
    • (2008) Trends Plant Sci , vol.13 , pp. 640-646
    • Wijnker, E.1    De Jong, H.2
  • 45
    • 77957776228 scopus 로고    scopus 로고
    • Systematic protein location mapping reveals five principal chromatin types in Drosophila cells
    • Filion GJ, et al. (2010) Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. Cell 143:212-224.
    • (2010) Cell , vol.143 , pp. 212-224
    • Filion, G.J.1
  • 47
    • 81755183075 scopus 로고    scopus 로고
    • Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes
    • Giraut L, et al. (2011) Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes. PLoS Genet 7:e1002354.
    • (2011) PLoS Genet , vol.7
    • Giraut, L.1
  • 48
    • 41949131536 scopus 로고    scopus 로고
    • Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays
    • Zhang X, Shiu SH, Cal A, Borevitz JO (2008) Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays. PLoS Genet 4:e1000032.
    • (2008) PLoS Genet , vol.4
    • Zhang, X.1    Shiu, S.H.2    Cal, A.3    Borevitz, J.O.4
  • 49
    • 34347327677 scopus 로고    scopus 로고
    • Epigenetic natural variation in Arabidopsis thaliana
    • Vaughn MW, et al. (2007) Epigenetic natural variation in Arabidopsis thaliana. PLoS Biol 5:e174.
    • (2007) PLoS Biol , vol.5
    • Vaughn, M.W.1
  • 52
    • 33749380600 scopus 로고    scopus 로고
    • A high-resolution map of Arabidopsis recombinant inbred lines by whole-genome exon array hybridization
    • Singer T, et al. (2006) A high-resolution map of Arabidopsis recombinant inbred lines by whole-genome exon array hybridization. PLoS Genet 2:e144.
    • (2006) PLoS Genet , vol.2
    • Singer, T.1
  • 53
    • 78449259560 scopus 로고    scopus 로고
    • Stress-induced activation of heterochromatic transcription
    • Tittel-Elmer M, et al. (2010) Stress-induced activation of heterochromatic transcription. PLoS Genet 6:e1001175.
    • (2010) PLoS Genet , vol.6
    • Tittel-Elmer, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.