메뉴 건너뛰기




Volumn 158, Issue 4, 2012, Pages 1523-1533

ANAP: An integrated knowledge base for Arabidopsis protein interaction network analysis

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 84859345028     PISSN: 00320889     EISSN: 15322548     Source Type: Journal    
DOI: 10.1104/pp.111.192203     Document Type: Article
Times cited : (30)

References (42)
  • 1
    • 84857780876 scopus 로고    scopus 로고
    • Evidence for network evolution in an Arabidopsis interactome map
    • Arabidopsis Interactome Mapping Consortium
    • Arabidopsis Interactome Mapping Consortium (2011) Evidence for network evolution in an Arabidopsis interactome map. Science 333: 601-607
    • (2011) Science , vol.333 , pp. 601-607
  • 3
    • 0037245913 scopus 로고    scopus 로고
    • BIND: The Biomolecular Interaction Network Database
    • Bader GD, Betel D, Hogue CW (2003) BIND: the Biomolecular Interaction Network Database. Nucleic Acids Res 31: 248-250
    • (2003) Nucleic Acids Res , vol.31 , pp. 248-250
    • Bader, G.D.1    Betel, D.2    Hogue, C.W.3
  • 7
    • 33645348241 scopus 로고    scopus 로고
    • The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries
    • Côté RG, Jones P, Apweiler R, Hermjakob H (2006) The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries. BMC Bioinformatics 7: 97
    • (2006) BMC Bioinformatics , vol.7 , pp. 97
    • Côté, R.G.1    Jones, P.2    Apweiler, R.3    Hermjakob, H.4
  • 8
    • 38549123986 scopus 로고    scopus 로고
    • AtPID: Arabidopsis thaliana Protein Interactome Database-an integrative platform for plant systems biology
    • Cui J, Li P, Li G, Xu F, Zhao C, Li Y, Yang Z, Wang G, YuQ, Li Y, et al (2008) AtPID: Arabidopsis thaliana Protein Interactome Database-an integrative platform for plant systems biology. Nucleic Acids Res 36: D999-D1008
    • (2008) Nucleic Acids Res , vol.36
    • Cui, J.1    Li, P.2    Li, G.3    Xu, F.4    Zhao, C.5    Li, Y.6    Yang, Z.7    Wang, G.8    Yu, Q.9    Li, Y.10
  • 13
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang W, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4: 44-57
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 18
    • 0037012884 scopus 로고    scopus 로고
    • Proteomics: Public-private group maps out initiatives
    • Kaiser J (2002) Proteomics: public-private group maps out initiatives. Science 296: 827
    • (2002) Science , vol.296 , pp. 827
    • Kaiser, J.1
  • 19
    • 79952202448 scopus 로고    scopus 로고
    • Cytoscape: Software for visualization and analysis of biological networks
    • Kohl M, Wiese S, Warscheid B (2011) Cytoscape: software for visualization and analysis of biological networks. Methods Mol Biol 696: 291-303
    • (2011) Methods Mol Biol , vol.696 , pp. 291-303
    • Kohl, M.1    Wiese, S.2    Warscheid, B.3
  • 22
    • 24044440971 scopus 로고    scopus 로고
    • BiNGO: A Cytoscape plugin to assess overrepresentation of Gene Ontology categories in biological networks
    • Maere S, Heymans K, Kuiper M (2005) BiNGO: a Cytoscape plugin to assess overrepresentation of Gene Ontology categories in biological networks. Bioinformatics 21: 3448-3449
    • (2005) Bioinformatics , vol.21 , pp. 3448-3449
    • Maere, S.1    Heymans, K.2    Kuiper, M.3
  • 25
    • 57849157992 scopus 로고    scopus 로고
    • NWB Team, Indiana University, Northeastern University, and University of Michigan
    • NWB Team (2006) Network Workbench Tool. Indiana University, Northeastern University, and University of Michigan. http://nwb.slis.indiana.edu
    • (2006) Network Workbench Tool
  • 27
    • 61749093196 scopus 로고    scopus 로고
    • ChEMBL: An interview with John Overington, team leader, chemogenomics at the European Bioinformatics Institute Outstation of the European Molecular Biology Laboratory (EMBL-EBI). Interview by Wendy A. Warr
    • Overington J (2009) ChEMBL: an interview with John Overington, team leader, chemogenomics at the European Bioinformatics Institute Outstation of the European Molecular Biology Laboratory (EMBL-EBI). Interview by Wendy A. Warr. J Comput Aided Mol Des 23: 195-198
    • (2009) J Comput Aided Mol Des , vol.23 , pp. 195-198
    • Overington, J.1
  • 28
    • 33747853260 scopus 로고    scopus 로고
    • APID: Agile Protein Interaction Data-Analyzer
    • Prieto C, De Las Rivas J (2006) APID: Agile Protein Interaction Data-Analyzer. Nucleic Acids Res 34: W298-W302
    • (2006) Nucleic Acids Res , vol.34
    • Prieto, C.1    de Las Rivas, J.2
  • 29
    • 54949127160 scopus 로고    scopus 로고
    • iRefIndex: A consolidated protein interaction database with provenance
    • Razick S, Magklaras G, Donaldson IM (2008) iRefIndex: a consolidated protein interaction database with provenance. BMC Bioinformatics 9: 405
    • (2008) BMC Bioinformatics , vol.9 , pp. 405
    • Razick, S.1    Magklaras, G.2    Donaldson, I.M.3
  • 31
    • 77149153062 scopus 로고    scopus 로고
    • The COP9 signalosome and its role in plant development
    • Schwechheimer C, Isono E (2010) The COP9 signalosome and its role in plant development. Eur J Cell Biol 89: 157-162
    • (2010) Eur J Cell Biol , vol.89 , pp. 157-162
    • Schwechheimer, C.1    Isono, E.2
  • 32
    • 0033669189 scopus 로고    scopus 로고
    • A network of protein-protein interactions in yeast
    • Schwikowski B, Uetz P, Fields S (2000) A network of protein-protein interactions in yeast. Nat Biotechnol 18: 1257-1261
    • (2000) Nat Biotechnol , vol.18 , pp. 1257-1261
    • Schwikowski, B.1    Uetz, P.2    Fields, S.3
  • 34
    • 33947252154 scopus 로고    scopus 로고
    • Network-based prediction of protein function
    • Sharan R, Ulitsky I, Shamir R (2007) Network-based prediction of protein function. Mol Syst Biol 3: 88
    • (2007) Mol Syst Biol , vol.3 , pp. 88
    • Sharan, R.1    Ulitsky, I.2    Shamir, R.3
  • 35
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: New features for data integration and network visualization
    • SmootME, Ono K, Ruscheinski J, Wang PL, Ideker T (2011) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 27: 431-432
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.E.1    Ono, K.2    Ruscheinski, J.3    Wang, P.L.4    Ideker, T.5
  • 42
    • 0036088133 scopus 로고    scopus 로고
    • DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions
    • Xenarios I, Salwínski L, Duan XJ, Higney P, Kim SM, Eisenberg D (2002) DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions. Nucleic Acids Res 30: 303-305
    • (2002) Nucleic Acids Res , vol.30 , pp. 303-305
    • Xenarios, I.1    Salwínski, L.2    Duan, X.J.3    Higney, P.4    Kim, S.M.5    Eisenberg, D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.