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Volumn 112, Issue , 2012, Pages 10-17

Construction and characterization of chimeric cellulases with enhanced catalytic activity towards insoluble cellulosic substrates

Author keywords

Alicyclobacillus acidocaldrious; Cellulose binding module; Chimeric enzymes; Computational modeling; Endoglucanase

Indexed keywords

ALICYCLOBACILLUS ACIDOCALDRIOUS; CELLULOSE BINDING MODULE; CHIMERIC ENZYMES; COMPUTATIONAL MODELING; ENDOGLUCANASES;

EID: 84859211668     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2012.02.066     Document Type: Article
Times cited : (36)

References (29)
  • 2
    • 0037226350 scopus 로고    scopus 로고
    • Characterization of a cellulase containing a family 30 carbohydrate-binding module (CBM) derived from Clostridium thermocellum CelJ: importance of the CBM to cellulose hydrolysis
    • Arai T., Araki R., Tanaka A., Karita S., Kimura T., Sakka K., Ohmiya K. Characterization of a cellulase containing a family 30 carbohydrate-binding module (CBM) derived from Clostridium thermocellum CelJ: importance of the CBM to cellulose hydrolysis. J. Bacteriol. 2003, 185:504-512.
    • (2003) J. Bacteriol. , vol.185 , pp. 504-512
    • Arai, T.1    Araki, R.2    Tanaka, A.3    Karita, S.4    Kimura, T.5    Sakka, K.6    Ohmiya, K.7
  • 3
    • 4744368323 scopus 로고    scopus 로고
    • Carbohydrate-binding modules: fine-tuning polysaccharide recognition
    • Boraston A.B., Bolam D.N., Gilbert H.J., Davies G.J. Carbohydrate-binding modules: fine-tuning polysaccharide recognition. Biochem. J. 2004, 382:769-781.
    • (2004) Biochem. J. , vol.382 , pp. 769-781
    • Boraston, A.B.1    Bolam, D.N.2    Gilbert, H.J.3    Davies, G.J.4
  • 4
    • 38349107268 scopus 로고    scopus 로고
    • Molecular dynamics, flexible docking, virtual screening, ADMET predictions, and molecular interaction field studies to design novel potential MAO-B inhibitors
    • Braun G.H., Jorge D.M., Ramos H.P., Alves R.M., da Silva V.B., Giuliatti S., Sampaio S.V., Taft C.A., Silva C.H. Molecular dynamics, flexible docking, virtual screening, ADMET predictions, and molecular interaction field studies to design novel potential MAO-B inhibitors. J. Biomol. Struct. Dyn. 2008, 25:347-355.
    • (2008) J. Biomol. Struct. Dyn. , vol.25 , pp. 347-355
    • Braun, G.H.1    Jorge, D.M.2    Ramos, H.P.3    Alves, R.M.4    da Silva, V.B.5    Giuliatti, S.6    Sampaio, S.V.7    Taft, C.A.8    Silva, C.H.9
  • 5
    • 0034641715 scopus 로고    scopus 로고
    • Cellulose-binding domains promote hydrolysis of different sites on crystalline cellulose
    • Carrard G., Koivula A., Soderlund H., Beguin P. Cellulose-binding domains promote hydrolysis of different sites on crystalline cellulose. Proc. Natl. Acad. Sci. USA 2000, 97:10342-10347.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 10342-10347
    • Carrard, G.1    Koivula, A.2    Soderlund, H.3    Beguin, P.4
  • 6
    • 43749119868 scopus 로고    scopus 로고
    • Molecular dynamics simulations of rhodopsin point mutants at the cytoplasmic side of helices 3 and 6
    • Cordomi A., Ramon E., Garriga P., Perez J.J. Molecular dynamics simulations of rhodopsin point mutants at the cytoplasmic side of helices 3 and 6. J. Biomol. Struct. Dyn. 2008, 25:573-587.
    • (2008) J. Biomol. Struct. Dyn. , vol.25 , pp. 573-587
    • Cordomi, A.1    Ramon, E.2    Garriga, P.3    Perez, J.J.4
  • 7
    • 0034699445 scopus 로고    scopus 로고
    • Loosening of plant cell walls by expansions
    • Cosgrove D.J. Loosening of plant cell walls by expansions. Nature 2000, 407:321-326.
    • (2000) Nature , vol.407 , pp. 321-326
    • Cosgrove, D.J.1
  • 8
    • 0026545567 scopus 로고
    • Assay of reducing end-groups in oligosaccharide homologues with 2,2'-bicinchoninate
    • Doner L.W., Irwin P.L. Assay of reducing end-groups in oligosaccharide homologues with 2,2'-bicinchoninate. Anal. Biochem. 1992, 202:50-53.
    • (1992) Anal. Biochem. , vol.202 , pp. 50-53
    • Doner, L.W.1    Irwin, P.L.2
  • 9
    • 0037213678 scopus 로고    scopus 로고
    • Gene cloning, sequencing, and characterization of a family 9 endoglucanase (CelA) with an unusual pattern of activity from the thermoacidophile Alicyclobacillus acidocaldarius ATCC27009
    • Eckert K., Zielinski F., Lo Leggio L., Schneider E. Gene cloning, sequencing, and characterization of a family 9 endoglucanase (CelA) with an unusual pattern of activity from the thermoacidophile Alicyclobacillus acidocaldarius ATCC27009. Appl. Microbiol. Biotechnol. 2002, 60:428-436.
    • (2002) Appl. Microbiol. Biotechnol. , vol.60 , pp. 428-436
    • Eckert, K.1    Zielinski, F.2    Lo Leggio, L.3    Schneider, E.4
  • 10
    • 0034064297 scopus 로고    scopus 로고
    • CelE, a multidomain cellulase from Clostridium cellulolyticum: a key enzyme in the cellulosome?
    • Gaudin C., Belaich A., Champ S., Belaich J.P. CelE, a multidomain cellulase from Clostridium cellulolyticum: a key enzyme in the cellulosome?. J. Bacteriol. 2000, 182:1910-1915.
    • (2000) J. Bacteriol. , vol.182 , pp. 1910-1915
    • Gaudin, C.1    Belaich, A.2    Champ, S.3    Belaich, J.P.4
  • 11
    • 84943470296 scopus 로고
    • Measurement of cellulase activities
    • Ghose T. Measurement of cellulase activities. Pure Appl. Chem. 1987, 59:257-268.
    • (1987) Pure Appl. Chem. , vol.59 , pp. 257-268
    • Ghose, T.1
  • 12
    • 46249092554 scopus 로고    scopus 로고
    • GROMACS 4: algorithms for highly efficient, load-balanced, and scalable molecular simulation
    • Hess B., Kutzner C., van der Spoel D., Lindahl E. GROMACS 4: algorithms for highly efficient, load-balanced, and scalable molecular simulation. J. Comput. Chem. 2008, 4:435-447.
    • (2008) J. Comput. Chem. , vol.4 , pp. 435-447
    • Hess, B.1    Kutzner, C.2    van der Spoel, D.3    Lindahl, E.4
  • 13
    • 0025605767 scopus 로고
    • Trends in biochemistry and enzymology of cellulose degradation
    • Klyosov A.A. Trends in biochemistry and enzymology of cellulose degradation. Biochemistry 1990, 29:10577-10585.
    • (1990) Biochemistry , vol.29 , pp. 10577-10585
    • Klyosov, A.A.1
  • 14
    • 34249740743 scopus 로고    scopus 로고
    • Processivity, substrate binding, and mechanism of cellulose hydrolysis by Thermobifida fusca Cel9A
    • Li Y., Irwin D.C., Wilson D.B. Processivity, substrate binding, and mechanism of cellulose hydrolysis by Thermobifida fusca Cel9A. Appl. Environ. Microbiol. 2007, 73:3165-3172.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 3165-3172
    • Li, Y.1    Irwin, D.C.2    Wilson, D.B.3
  • 15
    • 77950590882 scopus 로고    scopus 로고
    • Increased crystalline cellulose activity via combinations of amino acid changes in the family 9 catalytic domain and family 3c cellulose binding module of Thermobifida fusca Cel9A
    • Li Y., Irwin D.C., Wilson D.B. Increased crystalline cellulose activity via combinations of amino acid changes in the family 9 catalytic domain and family 3c cellulose binding module of Thermobifida fusca Cel9A. Appl. Environ. Microbiol. 2010, 76:2582-2588.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 2582-2588
    • Li, Y.1    Irwin, D.C.2    Wilson, D.B.3
  • 16
    • 77955272187 scopus 로고    scopus 로고
    • Molecular simulations provide new insights into the role of the accessory immunoglobulin-like domain of Cel9A
    • Liu H., Pereira J.H., Adams P.D., Sapra R., Simmons B.A., Sale K.L. Molecular simulations provide new insights into the role of the accessory immunoglobulin-like domain of Cel9A. FEBS Lett. 2010, 584:3431-3435.
    • (2010) FEBS Lett. , vol.584 , pp. 3431-3435
    • Liu, H.1    Pereira, J.H.2    Adams, P.D.3    Sapra, R.4    Simmons, B.A.5    Sale, K.L.6
  • 17
    • 77955503215 scopus 로고    scopus 로고
    • Identification of activity related amino acid mutations of a GH9 termite cellulase
    • Ni J., Takehara M., Watanabe H. Identification of activity related amino acid mutations of a GH9 termite cellulase. Bioresour. Technol. 2010, 101:6438-6443.
    • (2010) Bioresour. Technol. , vol.101 , pp. 6438-6443
    • Ni, J.1    Takehara, M.2    Watanabe, H.3
  • 19
    • 33745161547 scopus 로고    scopus 로고
    • Carbohydrate binding modules: biochemical properties and novel applications
    • Shoseyov O., Shani Z., Levy I. Carbohydrate binding modules: biochemical properties and novel applications. Microbiol. Mol. Biol. Rev. 2006, 70:283-295.
    • (2006) Microbiol. Mol. Biol. Rev. , vol.70 , pp. 283-295
    • Shoseyov, O.1    Shani, Z.2    Levy, I.3
  • 20
    • 0029430865 scopus 로고
    • Surveying molecular interactions with DOT
    • In: Proceedings of the 1995 ACM/IEEE Supercomputing Conference, San Diego, IEEE Computer Society Press, Los Alamitos, California, USA.
    • Ten Eyck, L.F., Mandell, J., Roberts, V.A., Pique, M.E., 1995. Surveying molecular interactions with DOT. In: Proceedings of the 1995 ACM/IEEE Supercomputing Conference, San Diego, IEEE Computer Society Press, Los Alamitos, California, USA.
    • (1995)
    • Ten Eyck, L.F.1    Mandell, J.2    Roberts, V.A.3    Pique, M.E.4
  • 21
    • 0029955959 scopus 로고    scopus 로고
    • Crystal structure of a bacterial family-III cellulose-binding domain: a general mechanism for attachment to cellulose
    • Tormo J., Lamed R., Chirino A., Morag E., Bayer A., Shoham Y., Steitz T. Crystal structure of a bacterial family-III cellulose-binding domain: a general mechanism for attachment to cellulose. EMBO J. 1996, 15:5739-5751.
    • (1996) EMBO J. , vol.15 , pp. 5739-5751
    • Tormo, J.1    Lamed, R.2    Chirino, A.3    Morag, E.4    Bayer, A.5    Shoham, Y.6    Steitz, T.7
  • 23
    • 77952267292 scopus 로고    scopus 로고
    • Interplay between Clostridium thermocellum family 48 and family 9 cellulases in cellulosomal versus noncellulosomal states
    • Vazana Y., Morais S., Barak Y., Lamed R., Bayer E.A. Interplay between Clostridium thermocellum family 48 and family 9 cellulases in cellulosomal versus noncellulosomal states. Appl. Environ. Microbiol. 2010, 76:3236-3243.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 3236-3243
    • Vazana, Y.1    Morais, S.2    Barak, Y.3    Lamed, R.4    Bayer, E.A.5
  • 24
    • 69949099255 scopus 로고    scopus 로고
    • Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans
    • Watson B.J., Zhang H., Longmire A.G., Moon Y.H., Hutcheson S.W. Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans. J. Bacteriol. 2009, 191:5697-5705.
    • (2009) J. Bacteriol. , vol.191 , pp. 5697-5705
    • Watson, B.J.1    Zhang, H.2    Longmire, A.G.3    Moon, Y.H.4    Hutcheson, S.W.5
  • 25
    • 0015008408 scopus 로고
    • The cellulase of Fusarium solani. Purification and specificity of the -(1-4)-glucanase and the -d-glucosidase components
    • Wood T.M. The cellulase of Fusarium solani. Purification and specificity of the -(1-4)-glucanase and the -d-glucosidase components. Biochem. J. 1971, 121:353-362.
    • (1971) Biochem. J. , vol.121 , pp. 353-362
    • Wood, T.M.1
  • 26
    • 40949121091 scopus 로고    scopus 로고
    • Conformational characteristics of unstructured peptides: alpha-synuclein
    • Yoon J., Park J., Jang S., Lee K., Shin S. Conformational characteristics of unstructured peptides: alpha-synuclein. J. Biomol. Struct. Dyn. 2008, 25:505-515.
    • (2008) J. Biomol. Struct. Dyn. , vol.25 , pp. 505-515
    • Yoon, J.1    Park, J.2    Jang, S.3    Lee, K.4    Shin, S.5
  • 27
    • 77958535213 scopus 로고    scopus 로고
    • Characterization of Thermobifida fusca cutinase-carbohydrate-binding module fusion proteins and their potential application in bioscouring
    • Zhang Y., Chen S., Xu M., Cavaco-Paulo A., Wu J., Chen J. Characterization of Thermobifida fusca cutinase-carbohydrate-binding module fusion proteins and their potential application in bioscouring. Appl. Environ. Microbiol. 2010, 76:6870-6876.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 6870-6876
    • Zhang, Y.1    Chen, S.2    Xu, M.3    Cavaco-Paulo, A.4    Wu, J.5    Chen, J.6
  • 28
    • 33644633124 scopus 로고    scopus 로고
    • A transition from cellulose swelling to cellulose dissolution by o-phosphoric acid: evidence from enzymatic hydrolysis and supramolecular structure
    • Zhang Y.H., Cui J., Lynd L.R., Kuang L.R. A transition from cellulose swelling to cellulose dissolution by o-phosphoric acid: evidence from enzymatic hydrolysis and supramolecular structure. Biomacromolecules 2006, 7:644-648.
    • (2006) Biomacromolecules , vol.7 , pp. 644-648
    • Zhang, Y.H.1    Cui, J.2    Lynd, L.R.3    Kuang, L.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.