-
1
-
-
0025294528
-
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
-
Amann, R., B.J. Binder, R.J. Olson, S.W. Chisholm, R. Devereux, and D.A. Stahl. 1990. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl. Environ. Microbiol. 56:1919-1925.
-
(1990)
Appl. Environ. Microbiol
, vol.56
, pp. 1919-1925
-
-
Amann, R.1
Binder, B.J.2
Olson, R.J.3
Chisholm, S.W.4
Devereux, R.5
Stahl, D.A.6
-
2
-
-
0033301308
-
Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds
-
Anton, J., E. Llobet-Brossa, F. Rodriguez-Valera, and R. Amann. 1999. Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds. Environ. Microbiol. 1:517-523.
-
(1999)
Environ. Microbiol
, vol.1
, pp. 517-523
-
-
Anton, J.1
Llobet-Brossa, E.2
Rodriguez-Valera, F.3
Amann, R.4
-
3
-
-
0033916431
-
Extremely halophilic Bacteria in crystallizer ponds from solar salterns
-
Anton, J., R. Rossello-Mora, F. Rodriguez-Valera, and R. Amann. 2000. Extremely halophilic Bacteria in crystallizer ponds from solar salterns. Appl. Environ. Microbiol. 66:3052-3057.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 3052-3057
-
-
Anton, J.1
Rossello-Mora, R.2
Rodriguez-Valera, F.3
Amann, R.4
-
4
-
-
0029862582
-
Description of prokaryotic biodiversity along the salinity gradient of a multipond solar saltern by direct PCR amplification of 16S rDNA
-
Benlloch, S., S.G. Acinas, A.J. Martinez-Mucia, and F. Rodriguez-Valera. 1996. Description of prokaryotic biodiversity along the salinity gradient of a multipond solar saltern by direct PCR amplification of 16S rDNA. Hydrobiologia 329:19-31.
-
(1996)
Hydrobiologia
, vol.329
, pp. 19-31
-
-
Benlloch, S.1
Acinas, S.G.2
Martinez-Mucia, A.J.3
Rodriguez-valera, F.4
-
5
-
-
0035001161
-
Archaeal biodiversity in crystallizer ponds from a solar saltern: Culture versus PCR
-
Benlloch, S., S.G. Acinas, J. Anton, A. Lopez-Lopez, S.P. Luz, and F. Rodriguez-Valera. 2001. Archaeal biodiversity in crystallizer ponds from a solar saltern: culture versus PCR. Microb. Ecol. 41:12-19.
-
(2001)
Microb. Ecol
, vol.41
, pp. 12-19
-
-
Benlloch, S.1
Acinas, S.G.2
Anton, J.3
Lopez-Lopez, A.4
Luz, S.P.5
Rodriguez-Valera, F.6
-
6
-
-
33847279910
-
Extremely halophilic Archaea from Tuz Lake, Turkey, and the adjacent Kaldirim and Kayacik salterns
-
Birbir, M., B. Calli, B. Mertoglu, R.E. Bardavid, A. Oren, M.N. Ogmen, and A. Ogan. 2007. Extremely halophilic Archaea from Tuz Lake, Turkey, and the adjacent Kaldirim and Kayacik salterns. World. J. Microbiol. Biotechnol. 23:309-316.
-
(2007)
World. J. Microbiol. Biotechnol
, vol.23
, pp. 309-316
-
-
Birbir, M.1
Calli, B.2
Mertoglu, B.3
Bardavid, R.E.4
Oren, A.5
Ogmen, M.N.6
Ogan, A.7
-
7
-
-
4444305820
-
Combined use of cultivation-dependent and cultivationindependent methods indicates that members of most haloarchaeal groups in an Australian crystallizer pond are cultivable
-
Burns, D.G., H.M. Camakaris, P.H. Janssen, and M.L. Dyall-Smith. 2004. Combined use of cultivation-dependent and cultivationindependent methods indicates that members of most haloarchaeal groups in an Australian crystallizer pond are cultivable. Appl. Environ. Microbiol. 70:5258-5265.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 5258-5265
-
-
Burns, D.G.1
Camakaris, H.M.2
Janssen, P.H.3
Dyall-Smith, M.L.4
-
8
-
-
70350136692
-
Archaeal diversity at the Great Salt Plains of Oklahoma described by cultivation and molecular analyses
-
Caton, T.M., I.R. Caton, L.R. Witte, and M.A. Schneegurt. 2009. Archaeal diversity at the Great Salt Plains of Oklahoma described by cultivation and molecular analyses. Microb. Ecol. 58:519-528.
-
(2009)
Microb. Ecol
, vol.58
, pp. 519-528
-
-
Caton, T.M.1
Caton, I.R.2
Witte, L.R.3
Schneegurt, M.A.4
-
9
-
-
35648991375
-
EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
-
Chun, J., J.H. Lee, Y. Jung, M. Kim, S. Kim, B.K. Kim, and Y.W. Lim. 2007. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int. J. Syst. Evol. Microbiol. 57:2259-2261.
-
(2007)
Int. J. Syst. Evol. Microbiol
, vol.57
, pp. 2259-2261
-
-
Chun, J.1
Lee, J.H.2
Jung, Y.3
Kim, M.4
Kim, S.5
Kim, B.K.6
Lim, Y.W.7
-
10
-
-
0026755238
-
Archaea in coastal marine environments
-
DeLong, E.F. 1992. Archaea in coastal marine environments. Proc. Natl. Acad. Sci. USA 89:5685-5689.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 5685-5689
-
-
Delong, E.F.1
-
11
-
-
1642353076
-
Distribution of prokaryotic genetic diversity in athalassohaline lakes of the Atacama Desert, Northern Chile
-
Demergasso, C., E.O. Casamayor, G. Chong, P. Galleguillos, L. Escudero, and C. Pedros-Alio. 2004. Distribution of prokaryotic genetic diversity in athalassohaline lakes of the Atacama Desert, Northern Chile. FEMS Microbiol. Ecol. 48:57-69.
-
(2004)
FEMS Microbiol. Ecol
, vol.48
, pp. 57-69
-
-
Demergasso, C.1
Casamayor, E.O.2
Chong, G.3
Galleguillos, P.4
Escudero, L.5
Pedros-Alio, C.6
-
12
-
-
46149110769
-
Novelty and spatio-temporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama)
-
Demergasso, C., L. Escudero, E.O. Casamayor, G. Chong, V. Balague, and C. Pedros-Alio. 2008. Novelty and spatio-temporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama). Extremophiles 12:491-504.
-
(2008)
Extremophiles
, vol.12
, pp. 491-504
-
-
Demergasso, C.1
Escudero, L.2
Casamayor, E.O.3
Chong, G.4
Balague, V.5
Pedros-Alio, C.6
-
13
-
-
38049032445
-
Interrelationships between Dunaliella and halophilic prokaryotes in saltern crystallizer ponds
-
Elevi Bardavid, R., P. Khristo, and A. Oren. 2008. Interrelationships between Dunaliella and halophilic prokaryotes in saltern crystallizer ponds. Extremophiles 12:5-14.
-
(2008)
Extremophiles
, vol.12
, pp. 5-14
-
-
Elevi Bardavid, R.1
Khristo, P.2
Oren, A.3
-
14
-
-
79960090422
-
Studies on the biodiversity of halophilic microorganisms isolated from El-Djerid salt lake (Tunisia) under aerobic conditions
-
Hedi, A., N. Sadfi, M.L. Fardeau, H. Rebib, J.L. Cayol, B. Ollivier, and A. Boudabous. 2009. Studies on the biodiversity of halophilic microorganisms isolated from El-Djerid salt lake (Tunisia) under aerobic conditions. Int. J. Microbiol. 2009:731786.
-
(2009)
Int. J. Microbiol
, pp. 731786
-
-
Hedi, A.1
Sadfi, N.2
Fardeau, M.L.3
Rebib, H.4
Cayol, J.L.5
Ollivier, B.6
Boudabous, A.7
-
15
-
-
5044240973
-
Bellerophon; a program to detect chimeric sequences in multiple sequence alignments
-
Huber, T., G. Faulkner, and P. Hugenholtz. 2004. Bellerophon; a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20:2317-2319.
-
(2004)
Bioinformatics
, vol.20
, pp. 2317-2319
-
-
Huber, T.1
Faulkner, G.2
Hugenholtz, P.3
-
16
-
-
0037315929
-
Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California
-
Humayoun, S.B., N. Bano, and J.T. Hollibaugh. 2003. Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California. Appl. Environ. Microbiol. 69:1030-1042.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 1030-1042
-
-
Humayoun, S.B.1
Bano, N.2
Hollibaugh, J.T.3
-
17
-
-
33745145824
-
Microbial diversity in water and sediment of Lake Chaka, an athalassohaline lake in northwestern China
-
Jiang, H., H. Dong, G. Zhang, B. Yu, L.R. Chapman, and M.W. Fields. 2006. Microbial diversity in water and sediment of Lake Chaka, an athalassohaline lake in northwestern China. Appl. Environ. Microbiol. 72:3832-3845.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 3832-3845
-
-
Jiang, H.1
Dong, H.2
Zhang, G.3
Yu, B.4
Chapman, L.R.5
Fields, M.W.6
-
18
-
-
33751223847
-
Salicola salis sp. nov., an extremely halophilic bacterium isolated from Ezzemoul sabkha in Algeria
-
Kharroub, K., M. Aguilera, T. Quesada, J.A. Morillo, A. Ramos-Cormenzana, A. Boulharouf, and M. Monteoliva-Sanchez. 2006. Salicola salis sp. nov., an extremely halophilic bacterium isolated from Ezzemoul sabkha in Algeria. Int. J. Syst. Evol. Microbiol. 56:2647-2652.
-
(2006)
Int. J. Syst. Evol. Microbiol
, vol.56
, pp. 2647-2652
-
-
Kharroub, K.1
Aguilera, M.2
Quesada, T.3
Morillo, J.A.4
Ramos-cormenzana, A.5
Boulharouf, A.6
Monteoliva-Sanchez, M.7
-
19
-
-
0008048504
-
Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses
-
Lane, D.J., B. Pace, G.J. Olsen, D.A. Stahl, M.L. Sogin, and N.R. Pace. 1985. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc. Natl. Acad. Sci. USA 82:6955-6959.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 6955-6959
-
-
Lane, D.J.1
Pace, B.2
Olsen, G.J.3
Stahl, D.A.4
Sogin, M.L.5
Pace, N.R.6
-
20
-
-
0036163083
-
Microbial diversity and complexity in hypersaline environments: A preliminary assessment
-
Litchfield, C.D., and P.M. Gillevet. 2002. Microbial diversity and complexity in hypersaline environments: a preliminary assessment. J. Ind. Microbiol. Biotechnol. 28:48-55.
-
(2002)
J. Ind. Microbiol. Biotechnol
, vol.28
, pp. 48-55
-
-
Litchfield, C.D.1
Gillevet, P.M.2
-
22
-
-
33745161855
-
Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes
-
Maturrano, L., F. Santos, R. Rossello-Mora, and J. Anton. 2006. Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes. Appl. Environ. Microbiol. 72:3887-3895.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 3887-3895
-
-
Maturrano, L.1
Santos, F.2
Rossello-Mora, R.3
Anton, J.4
-
23
-
-
35448992467
-
Novel and unexpected prokaryotic diversity in water and sediments of the alkaline, hypersaline lakes of the Wadi An Natrun, Egypt
-
Mesbah, N.M., S.H. Abou-El-Ela, and J. Wiegel. 2007. Novel and unexpected prokaryotic diversity in water and sediments of the alkaline, hypersaline lakes of the Wadi An Natrun, Egypt. Microb. Ecol. 54:598-617.
-
(2007)
Microb. Ecol
, vol.54
, pp. 598-617
-
-
Mesbah, N.M.1
Abou-El-Ela, S.H.2
Wiegel, J.3
-
24
-
-
49249108531
-
Prokaryotic diversity in Tuz Lake, a hypersaline environment in Inland Turkey
-
Mutlu, M.B., M. Martinez-Garcia, F. Santos, A. Pena, K. Guven, and J. Anton. 2008. Prokaryotic diversity in Tuz Lake, a hypersaline environment in Inland Turkey. FEMS Microbiol. Ecol. 65:474-483.
-
(2008)
FEMS Microbiol. Ecol
, vol.65
, pp. 474-483
-
-
Mutlu, M.B.1
Martinez-Garcia, M.2
Santos, F.3
Pena, A.4
Guven, K.5
Anton, J.6
-
25
-
-
0027460328
-
Profiling in complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction amplified genes coding for 16S rRNA
-
Muyzer, G., E.C. De Waal, and A.G. Uitterrlinden. 1993. Profiling in complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
-
(1993)
Appl. Environ. Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
de Waal, E.C.2
Uitterrlinden, A.G.3
-
26
-
-
77951769203
-
Diversity of Haloquadratum and other haloarchaea in three, geographically distant, Australian saltern crystallizer ponds
-
Oh, D., K. Porter, B. Russ, D. Burns, and M. Dyall-Smith. 2010. Diversity of Haloquadratum and other haloarchaea in three, geographically distant, Australian saltern crystallizer ponds. Extremophiles 14:161-169.
-
(2010)
Extremophiles
, vol.14
, pp. 161-169
-
-
Oh, D.1
Porter, K.2
Russ, B.3
Burns, D.4
Dyall-Smith, M.5
-
27
-
-
26244431678
-
Diversity of halophilic archaea in the crystallizers of an Adriatic solar saltern
-
Pašić, L., S. Galan Barutal, N. Poklar Ulrih, M. Granar, and B. Herzog Velikonj. 2005. Diversity of halophilic archaea in the crystallizers of an Adriatic solar saltern. FEMS Microbiol. Ecol. 54:491-498.
-
(2005)
FEMS Microbiol. Ecol
, vol.54
, pp. 491-498
-
-
Pašić, L.1
Barutal, S.G.2
Ulrih, N.P.3
Granar, M.4
Velikonj, B.H.5
-
28
-
-
0019476181
-
In vivo susceptibility of halophilic and methanogenic organisms to protein synthesis inhibitors
-
Pecher, T., and A. Bock. 1981. In vivo susceptibility of halophilic and methanogenic organisms to protein synthesis inhibitors. FEMS Microbiol. Lett. 10:295-297.
-
(1981)
FEMS Microbiol. Lett
, vol.10
, pp. 295-297
-
-
Pecher, T.1
Bock, A.2
-
29
-
-
61349198759
-
Screening and isolation of halophilic bacteria producing extracellular hydrolyses from Howz Soltan Lake
-
Rohban, R., M.A. Amoozegar, and A. Ventosa. 2009. Screening and isolation of halophilic bacteria producing extracellular hydrolyses from Howz Soltan Lake, Iran. J Ind. Microbiol. Biotechnol. 36:333-340.
-
(2009)
Iran. J Ind. Microbiol. Biotechnol
, vol.36
, pp. 333-340
-
-
Rohban, R.1
Amoozegar, M.A.2
Ventosa, A.3
-
30
-
-
1842614234
-
Substrate uptake in extremely halophilic microbial communities revealed by microautoradiography and fluorescence in situ hybridization
-
Rossello-Mora, R., N. Lee, J. Anton, and M. Wagner. 2003. Substrate uptake in extremely halophilic microbial communities revealed by microautoradiography and fluorescence in situ hybridization. Extremophiles 7:409-413.
-
(2003)
Extremophiles
, vol.7
, pp. 409-413
-
-
Rossello-Mora, R.1
Lee, N.2
Anton, J.3
Wagner, M.4
-
31
-
-
0037241080
-
Diversity of moderately halophilic bacteria producing extracellular hydrolytic enzymes
-
Sanchez-Porro, C., S. Martin, E. Mellado, and A. Ventosa. 2002. Diversity of moderately halophilic bacteria producing extracellular hydrolytic enzymes. J. Appl. Microbiol. 94:295-300.
-
(2002)
J. Appl. Microbiol
, vol.94
, pp. 295-300
-
-
Sanchez-Porro, C.1
Martin, S.2
Mellado, E.3
Ventosa, A.4
-
32
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss, P.D., S.L Westcott, T. Ryabin, et al. 2009. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75:7537-7541.
-
(2009)
Appl. Environ. Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
-
33
-
-
26244441574
-
Molecular analysis of the sulfate reducing and archaeal community in a meromictic soda lake (Mono Lake, California) by targeting 16S rRNA, mcrA, apsA, and dsrAB genes
-
Scholten, J.C.M., S.B. Joye, J.T. Hollibaugh, and J.C. Murrell. 2005. Molecular analysis of the sulfate reducing and archaeal community in a meromictic soda lake (Mono Lake, California) by targeting 16S rRNA, mcrA, apsA, and dsrAB genes. Microbiol. Ecol. 50:29-39.
-
(2005)
Microbiol. Ecol
, vol.50
, pp. 29-39
-
-
Scholten, J.C.M.1
Joye, S.B.2
Hollibaugh, J.T.3
Murrell, J.C.4
-
34
-
-
0030741576
-
Phylogenetic analysis and in situ identification of bacteria in activated sludge
-
Snaidr, J., R. Amann, I. Huber, W. Ludwig, and K.H. Schleifer. 1997. Phylogenetic analysis and in situ identification of bacteria in activated sludge. Appl. Environ. Microbiol. 63:2884-2896.
-
(1997)
Appl. Environ. Microbiol
, vol.63
, pp. 2884-2896
-
-
Snaidr, J.1
Amann, R.2
Huber, I.3
Ludwig, W.4
Schleifer, K.H.5
-
35
-
-
0003341851
-
Development and application of nucleic acid probes in bacterial systematics
-
In E. Stackebrandt, and M. Goodfellow (ed.), John Wiley & Sons Ltd., Chichester, England
-
Stahl, D.A., and R. Amann. 1991. Development and application of nucleic acid probes in bacterial systematics. p. 205-248. In E. Stackebrandt, and M. Goodfellow (ed.), Nucleic Acid Techniques in Bacterial Systematics. John Wiley & Sons Ltd., Chichester, England.
-
(1991)
Nucleic Acid Techniques In Bacterial Systematics
, pp. 205-248
-
-
Stahl, D.A.1
Amann, R.2
-
36
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum ADparsimony methods
-
doi: 10.1093/molbev/ msr121
-
Tamura, K., D. Peterson, N. Peterson, G. Stecher, M. Nei, and S. Kumar. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum ADparsimony methods. Mol. Biol. Evol., doi: 10.1093/molbev/ msr121.
-
(2011)
Mol. Biol. Evol
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
37
-
-
0033967561
-
Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah
-
Waino, M., B.J. Tindall, and K. Ingvorsen. 2000. Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah. Int. J. Syst. Evol. Microbiol. 50:183-190.
-
(2000)
Int. J. Syst. Evol. Microbiol
, vol.50
, pp. 183-190
-
-
Waino, M.1
Tindall, B.J.2
Ingvorsen, K.3
|