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Volumn 50, Issue 1, 2005, Pages 29-39

Molecular analysis of the sulfate reducing and archaeal community in a meromictic soda lake (Mono Lake, California) by targeting 16S rRNA, mcrA, apsA, and dsrAB genes

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; CARBON; RNA 16S; SULFATE; WATER;

EID: 26244441574     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-004-0085-8     Document Type: Article
Times cited : (79)

References (43)
  • 3
    • 0034554802 scopus 로고    scopus 로고
    • Diversity and community structure within anoxic sediment from marine salinity meromictic lakes and a coastal meromictic marine basin, Vestfold Hills, Eastern Antarctica
    • Bowman, JP, Rea, SM, McCammon, SA, McMeekin, TA (2000) Diversity and community structure within anoxic sediment from marine salinity meromictic lakes and a coastal meromictic marine basin, Vestfold Hills, Eastern Antarctica. Environ Microbiol 2: 227-237
    • (2000) Environ Microbiol , vol.2 , pp. 227-237
    • Bowman, J.P.1    Rea, S.M.2    McCammon, S.A.3    McMeekin, T.A.4
  • 4
    • 0033909552 scopus 로고    scopus 로고
    • Development of oligonucleotide probes and PCR primers for detecting phylogenetic subgroups of sulfate-reducing bacteria
    • Daly, K, Sharp, RJ, McCarthy, AJ (2000) Development of oligonucleotide probes and PCR primers for detecting phylogenetic subgroups of sulfate-reducing bacteria. Microbiology 146: 1693-1705
    • (2000) Microbiology , vol.146 , pp. 1693-1705
    • Daly, K.1    Sharp, R.J.2    McCarthy, A.J.3
  • 5
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • USA
    • DeLong, EF (1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89: 5685-5689
    • (1992) Proc Natl Acad Sci , vol.89 , pp. 5685-5689
    • DeLong, E.F.1
  • 6
    • 0028594902 scopus 로고
    • High abundance of Archaea in Antarctic marine picoplankton
    • DeLong, EF, Wu, KY, Prézelin, BB, Jovine, RVM (1994) High abundance of Archaea in Antarctic marine picoplankton. Nature 371: 695-697
    • (1994) Nature , vol.371 , pp. 695-697
    • DeLong, E.F.1    Wu, K.Y.2    Prézelin, B.B.3    Jovine, R.V.M.4
  • 7
    • 0035146134 scopus 로고    scopus 로고
    • Novel bacterial lineages at the (sub)division level as detected by signature nucleotide-targeted recovery of 16S rRNA genes from bulk soil and rice roots of flooded rice microcosms
    • Derakshani, M, Lukow, T, Liesack, W (2001) Novel bacterial lineages at the (sub)division level as detected by signature nucleotide-targeted recovery of 16S rRNA genes from bulk soil and rice roots of flooded rice microcosms. Appl Environ Microbiol 67: 623-631
    • (2001) Appl Environ Microbiol , vol.67 , pp. 623-631
    • Derakshani, M.1    Lukow, T.2    Liesack, W.3
  • 8
    • 0032888598 scopus 로고    scopus 로고
    • Novel 16S rRNA gene sequences retrieved from highly saline brine sediments of Kebrit Deep, Red Sea
    • Eder, W, Ludwig, W, Huber, R (1999) Novel 16S rRNA gene sequences retrieved from highly saline brine sediments of Kebrit Deep, Red Sea. Arch Microbiol 172: 213-218
    • (1999) Arch Microbiol , vol.172 , pp. 213-218
    • Eder, W.1    Ludwig, W.2    Huber, R.3
  • 9
    • 0036136241 scopus 로고    scopus 로고
    • Phylogenetic analysis reveals multiple lateral transfers of adenosine-5′-phosphosulfate reductase genes among sulfate-reducing microorganisms
    • Friedrich, MW (2002) Phylogenetic analysis reveals multiple lateral transfers of adenosine-5′-phosphosulfate reductase genes among sulfate-reducing microorganisms. J Bacteriol 184: 278-289
    • (2002) J Bacteriol , vol.184 , pp. 278-289
    • Friedrich, M.W.1
  • 10
    • 0030619262 scopus 로고    scopus 로고
    • Widespread Archaea and novel bacteria from the deep sea as shown by 16S rRNA gene sequences
    • Fuhrman, JA, Davis, AA (1997) Widespread Archaea and novel bacteria from the deep sea as shown by 16S rRNA gene sequences. Mar Ecol Prog Ser 150: 275-285
    • (1997) Mar Ecol Prog Ser , vol.150 , pp. 275-285
    • Fuhrman, J.A.1    Davis, A.A.2
  • 11
    • 2542508293 scopus 로고    scopus 로고
    • Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval
    • Großkopf, R, Janssen, PH, Liesack, W (1998) Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval. Appl Environ Microbiol 64: 960-969
    • (1998) Appl Environ Microbiol , vol.64 , pp. 960-969
    • Großkopf, R.1    Janssen, P.H.2    Liesack, W.3
  • 12
    • 0040336333 scopus 로고    scopus 로고
    • Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms
    • Großkopf, R, Stubner, S, Liesack, W (1998) Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms. Appl Environ Microbiol 64: 4983-4989
    • (1998) Appl Environ Microbiol , vol.64 , pp. 4983-4989
    • Großkopf, R.1    Stubner, S.2    Liesack, W.3
  • 13
    • 0030032633 scopus 로고    scopus 로고
    • Isolation and identification of methanogen-specific DNA from blanket bog peat by PCR amplification and sequence analysis
    • Hales, BA, Edwards, C, Ritchie, DA, Hall, G, Pickup, RW, Saunders, JR (1996) Isolation and identification of methanogen-specific DNA from blanket bog peat by PCR amplification and sequence analysis. Appl Environ Microbiol 62: 668-675
    • (1996) Appl Environ Microbiol , vol.62 , pp. 668-675
    • Hales, B.A.1    Edwards, C.2    Ritchie, D.A.3    Hall, G.4    Pickup, R.W.5    Saunders, J.R.6
  • 15
    • 0034352427 scopus 로고    scopus 로고
    • Molecular and isotopic analysis of anaerobic methane-oxidizing communities in marine sediments
    • Hinrichs, K-U, Summons, RE, Orphan, V, Sylva, SP, Hayes, JM (2000) Molecular and isotopic analysis of anaerobic methane-oxidizing communities in marine sediments. Org Chem 31: 1685-1701
    • (2000) Org Chem , vol.31 , pp. 1685-1701
    • Hinrichs, K.-U.1    Summons, R.E.2    Orphan, V.3    Sylva, S.P.4    Hayes, J.M.5
  • 16
    • 0037315929 scopus 로고    scopus 로고
    • Depth distribution of microbial diversity in a meromictic soda lake; Mono Lake in California
    • Humayoun, SH, Bano, N, Hollibaugh, JT (2003) Depth distribution of microbial diversity in a meromictic soda lake; Mono Lake in California. Appl Environ Microbiol 69: 1030-1042
    • (2003) Appl Environ Microbiol , vol.69 , pp. 1030-1042
    • Humayoun, S.H.1    Bano, N.2    Hollibaugh, J.T.3
  • 17
    • 0027837947 scopus 로고
    • Meromixis in hypersaline Mono Lake, California. 1. Vertical mixing and density stratification during the onset, persistence, and breakdown of meromixis
    • Jellison, R, Melack, JM (1993) Meromixis in hypersaline Mono Lake, California. 1. Vertical mixing and density stratification during the onset, persistence, and breakdown of meromixis. Limnol Oceanogr 38: 1008-1019
    • (1993) Limnol Oceanogr , vol.38 , pp. 1008-1019
    • Jellison, R.1    Melack, J.M.2
  • 18
    • 0027802266 scopus 로고
    • Meromixis in hypersaline Mono Lake, California. 2. Nitrogen fluxes
    • Jellison, R, Miller, LG, Melack, JM, Dana, GL (1993) Meromixis in hypersaline Mono Lake, California. 2. Nitrogen fluxes. Limnol Oceanogr 38: 1020-1039
    • (1993) Limnol Oceanogr , vol.38 , pp. 1020-1039
    • Jellison, R.1    Miller, L.G.2    Melack, J.M.3    Dana, G.L.4
  • 20
    • 0031196307 scopus 로고    scopus 로고
    • Molecular analyses of the sediment of the 11000-m deep Mariana Trench
    • Kato, C, Li, L, Tamaoka, J, Horikoshi, K (1997) Molecular analyses of the sediment of the 11000-m deep Mariana Trench. Extremophiles 1: 117-123
    • (1997) Extremophiles , vol.1 , pp. 117-123
    • Kato, C.1    Li, L.2    Tamaoka, J.3    Horikoshi, K.4
  • 23
    • 0025349888 scopus 로고
    • Methanohalophilus oregonense sp. nov., a methylotrophic methanogen from an alkaline, saline aquifer
    • Liu, Y, Boone, DR, Choy, C (1990) Methanohalophilus oregonense sp. nov., a methylotrophic methanogen from an alkaline, saline aquifer. Int J Syst Bacteriol 40: 111-116
    • (1990) Int J Syst Bacteriol , vol.40 , pp. 111-116
    • Liu, Y.1    Boone, D.R.2    Choy, C.3
  • 25
    • 0035206819 scopus 로고    scopus 로고
    • Molecular analyses of methyl-coenzyme M reductase α-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage
    • Lueders, T, Chin, K-J, Conrad, R, Friedrich, M (2001) Molecular analyses of methyl-coenzyme M reductase α-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage. Environ Microbiol 3: 194-204
    • (2001) Environ Microbiol , vol.3 , pp. 194-204
    • Lueders, T.1    Chin, K.-J.2    Conrad, R.3    Friedrich, M.4
  • 26
    • 0030620440 scopus 로고    scopus 로고
    • Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara channel
    • Massana, R, Murray, AE, Preston, CM, DeLong, EF (1997) Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara channel. Appl Environ Microbiol 63: 50-56
    • (1997) Appl Environ Microbiol , vol.63 , pp. 50-56
    • Massana, R.1    Murray, A.E.2    Preston, C.M.3    DeLong, E.F.4
  • 27
    • 0032468270 scopus 로고    scopus 로고
    • Limnological conditions in Mono Lake: Contrasting monomixis and meromixis in the 1990s
    • Melack, JM, Jellison, R (1998) Limnological conditions in Mono Lake: contrasting monomixis and meromixis in the 1990s. Hydrobiologia 384: 21-39
    • (1998) Hydrobiologia , vol.384 , pp. 21-39
    • Melack, J.M.1    Jellison, R.2
  • 28
    • 0027870294 scopus 로고
    • Meromixis in hypersaline Mono Lake, California. 3. Biogeochemical response to stratification and overturn
    • Miller, LG, Jellison, R, Oremland, RS, Culbertson, CW (1993) Meromixis in hypersaline Mono Lake, California. 3. Biogeochemical response to stratification and overturn. Limnol Oceanogr 38: 1040-1051
    • (1993) Limnol Oceanogr , vol.38 , pp. 1040-1051
    • Miller, L.G.1    Jellison, R.2    Oremland, R.S.3    Culbertson, C.W.4
  • 29
    • 0030831861 scopus 로고    scopus 로고
    • Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh
    • Munson, MA, Nedwell, DB, Embley, TM (1997) Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh. Appl Environ Microbiol 63: 4729-4733
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4729-4733
    • Munson, M.A.1    Nedwell, D.B.2    Embley, T.M.3
  • 33
    • 0000135616 scopus 로고    scopus 로고
    • Desulfonatronum lacustre gen. nov., sp. nov.: A new alkaliphilic sulfate-reducing bacterium utilizing ethanol
    • Pikuta, EV, Zhilina, TN, Zavarzin, GA, Kostrikina, NA, Osipov, GA, Rainey, FA (1998) Desulfonatronum lacustre gen. nov., sp. nov.: a new alkaliphilic sulfate-reducing bacterium utilizing ethanol. Mikrobiologiya 67: 123-131
    • (1998) Mikrobiologiya , vol.67 , pp. 123-131
    • Pikuta, E.V.1    Zhilina, T.N.2    Zavarzin, G.A.3    Kostrikina, N.A.4    Osipov, G.A.5    Rainey, F.A.6
  • 34
    • 0141614090 scopus 로고    scopus 로고
    • Desulfonatronum thiodismutans sp. nov., a novel alkaliphilic, sulfate-reducing bacterium capable of lithoautotrophic growth
    • Pikuta, EV, Hoover, RB, Bej, AK, Marsic, D, Whitman, WB, Cleland, D, Krader, P (2003) Desulfonatronum thiodismutans sp. nov., a novel alkaliphilic, sulfate-reducing bacterium capable of lithoautotrophic growth. Int J Syst Evol Microbiol 53: 1327-1332
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1327-1332
    • Pikuta, E.V.1    Hoover, R.B.2    Bej, A.K.3    Marsic, D.4    Whitman, W.B.5    Cleland, D.6    Krader, P.7
  • 36
    • 0025025399 scopus 로고
    • Rapid isolation of miniprep DNA for double strand sequencing
    • Saunders, SE, Burke, JF (1990) Rapid isolation of miniprep DNA for double strand sequencing. Nucleic Acids Res 18: 4948
    • (1990) Nucleic Acids Res , vol.18 , pp. 4948
    • Saunders, S.E.1    Burke, J.F.2
  • 37
    • 0034530872 scopus 로고    scopus 로고
    • Isolation and characterization of acetate-utilizing anaerobes from a freshwater sediment
    • Scholten, JCM, Stams, AJM (2000) Isolation and characterization of acetate-utilizing anaerobes from a freshwater sediment. Microb. Ecol. 40: 292-299
    • (2000) Microb. Ecol. , vol.40 , pp. 292-299
    • Scholten, J.C.M.1    Stams, A.J.M.2
  • 39
    • 0035316138 scopus 로고    scopus 로고
    • Biogeochemical and molecular signatures of anaerobic methane oxidation in a marine sediment
    • Thomsen, TR, Finster, K, Ramsing, NB (2001) Biogeochemical and molecular signatures of anaerobic methane oxidation in a marine sediment. Appl Environ Microbiol 67: 1646-1656
    • (2001) Appl Environ Microbiol , vol.67 , pp. 1646-1656
    • Thomsen, T.R.1    Finster, K.2    Ramsing, N.B.3
  • 40
    • 0034548842 scopus 로고    scopus 로고
    • New perspectives on anaerobic methane oxidation
    • Valentine, DL, Reeburgh, WS (2000) New perspectives on anaerobic methane oxidation. Environ Microbiol 2: 477-484
    • (2000) Environ Microbiol , vol.2 , pp. 477-484
    • Valentine, D.L.1    Reeburgh, W.S.2
  • 41
    • 0032463021 scopus 로고    scopus 로고
    • Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration
    • Wagner, M, Roger, AJ, Flax, JL, Brusseau, GA, Stahl, DA (1998) Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration. J Bacteriol 180: 2975-2982
    • (1998) J Bacteriol , vol.180 , pp. 2975-2982
    • Wagner, M.1    Roger, A.J.2    Flax, J.L.3    Brusseau, G.A.4    Stahl, D.A.5


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