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Volumn 63, Issue 5, 2012, Pages 2217-2230

Insights into Populus XIP aquaporins: Evolutionary expansion, protein functionality, and environmental regulation

Author keywords

Aquaporin; evolution; in situ hybridization; molecular physiology; Populus; XIP

Indexed keywords

AQUAPORIN; ISOPROTEIN; VEGETABLE PROTEIN; WATER;

EID: 84858022389     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/err404     Document Type: Article
Times cited : (91)

References (51)
  • 2
    • 78349302720 scopus 로고    scopus 로고
    • Functional characterization of drought-responsive aquaporins in Populus balsamifera and Populus simonii3balsamifera clones with different drought resistance strategies
    • Almeida-Rodriguez A, Cooke JEK, Yeh F, Zwiazek JJ. 2010. Functional characterization of drought-responsive aquaporins in Populus balsamifera and Populus simonii3balsamifera clones with different drought resistance strategies. Physiologia Plantarum 140, 321-333.
    • (2010) Physiologia Plantarum , vol.140 , pp. 321-333
    • Almeida-Rodriguez, A.1    Cooke, J.E.K.2    Yeh, F.3    Zwiazek, J.J.4
  • 5
    • 79955032410 scopus 로고    scopus 로고
    • Solanaceae XIPs are plasma membrane aquaporins that facilitate the transport of many uncharged substrates
    • Bienert GP, Bienert MD, Jahn TP, Boutry M, Chaumont F. 2011. Solanaceae XIPs are plasma membrane aquaporins that facilitate the transport of many uncharged substrates. The Plant Journal 66, 306-317.
    • (2011) The Plant Journal , vol.66 , pp. 306-317
    • Bienert, G.P.1    Bienert, M.D.2    Jahn, T.P.3    Boutry, M.4    Chaumont, F.5
  • 6
    • 51249169259 scopus 로고
    • A simple and efficient method for isolating RNA from pine trees
    • Chang S, Puryear J, Cairney J. 1993. A simple and efficient method for isolating RNA from pine trees. Plant Molecular Biology Reporter 11, 113-116.
    • (1993) Plant Molecular Biology Reporter , vol.11 , pp. 113-116
    • Chang, S.1    Puryear, J.2    Cairney, J.3
  • 7
    • 0035106823 scopus 로고    scopus 로고
    • Aquaporins constitute a large and highly divergent protein family in maize
    • DOI 10.1104/pp.125.3.1206
    • Chaumont F, Barrieu F, Wojcik E, Chrispeels MJ, Jung R. 2001. Aquaporins constitute a large and highly divergent protein family in maize. Plant Physiology 125, 1206-1215. (Pubitemid 32224611)
    • (2001) Plant Physiology , vol.125 , Issue.3 , pp. 1206-1215
    • Chaumont, F.1    Barrieu, F.2    Wojcik, E.3    Chrispeels, M.J.4    Jung, R.5
  • 8
    • 26944462019 scopus 로고    scopus 로고
    • Regulation of plant aquaporin activity
    • DOI 10.1042/BC20040133
    • Chaumont F, Moshelion M, Daniels MJ. 2005. Regulation of plant aquaporin activity. Biology of the Cell 97, 749-764. (Pubitemid 41479684)
    • (2005) Biology of the Cell , vol.97 , Issue.10 , pp. 749-764
    • Chaumont, F.1    Moshelion, M.2    Daniels, M.J.3
  • 9
    • 70350242927 scopus 로고    scopus 로고
    • A phylogenetic classification of the land plants to accompany APG III
    • Chase MW, Reveal JL. 2009. A phylogenetic classification of the land plants to accompany APG III. Botanical Journal of the Linnean Society 161, 122-127.
    • (2009) Botanical Journal of the Linnean Society , vol.161 , pp. 122-127
    • Chase, M.W.1    Reveal, J.L.2
  • 11
    • 1342288004 scopus 로고    scopus 로고
    • The Jalview Java alignment editor
    • DOI 10.1093/bioinformatics/btg430
    • Clamp M, Cuff J, Searle SM, Barton GJ. 2004. The Jalview Java alignment editor. Bioinformatics 20, 426-427. (Pubitemid 38262778)
    • (2004) Bioinformatics , vol.20 , Issue.3 , pp. 426-427
    • Clamp, M.1    Cuff, J.2    Searle, S.M.3    Barton, G.J.4
  • 12
    • 56549119570 scopus 로고    scopus 로고
    • Turning a hobby into a job: How duplicated genes find new functions
    • DOI 10.1038/nrg2482, PII NRG2482
    • Conant GC, Wolfe KH. 2008. Turning a hobby into a job: how duplicated genes find new functions. Nature Reviews Genetics 9, 938-950. (Pubitemid 352719432)
    • (2008) Nature Reviews Genetics , vol.9 , Issue.12 , pp. 938-950
    • Conant, G.C.1    Wolfe, K.H.2
  • 13
    • 32644481938 scopus 로고    scopus 로고
    • Genome-wide identification and testing of superior reference genes for transcript normalization in arabidopsis
    • DOI 10.1104/pp.105.063743
    • Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR. 2005. Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiology 139, 5-17. (Pubitemid 43951587)
    • (2005) Plant Physiology , vol.139 , Issue.1 , pp. 5-17
    • Czechowski, T.1    Stitt, M.2    Altmann, T.3    Udvardi, M.K.4    Scheible, W.-R.5
  • 14
    • 43949130751 scopus 로고    scopus 로고
    • Unexpected complexity of the aquaporin gene family in the moss Physcomitrella patens
    • Danielson JAH, Johanson U. 2008. Unexpected complexity of the aquaporin gene family in the moss Physcomitrella patens. BMC Plant Biology 8, 45.
    • (2008) BMC Plant Biology , vol.8 , pp. 45
    • Jah, D.1    Johanson, U.2
  • 16
    • 0036209785 scopus 로고    scopus 로고
    • Aquaglyceroporins: Channel proteins with a conserved core, multiple functions, and variable surfaces
    • DOI 10.1016/S0074-7696(02)15006-6
    • Engel A, Stahlberg H. 2002. Aquaglyceroporins: channel proteins with a conserved core, multiple functions, and variable surfaces. International Review of Cytology 215, 75-104. (Pubitemid 34280292)
    • (2002) International Review of Cytology , vol.215 , pp. 75-104
    • Engel, A.1    Stahlberg, H.2
  • 17
    • 67651039811 scopus 로고    scopus 로고
    • Bias in plant gene content following different sorts of duplication: Tandem, whole-genome, segmental, or by transposition
    • Freeling M. 2009. Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition. Annual Review of Plant Biology 60, 433-453.
    • (2009) Annual Review of Plant Biology , vol.60 , pp. 433-453
    • Freeling, M.1
  • 19
    • 0347033256 scopus 로고    scopus 로고
    • Role of duplicate genes in genetic robustness against null mutations
    • DOI 10.1038/nature01198
    • Gu ZL, Steinmetz LM, Gu X, et al. 2003. Role of duplicate genes in genetic robustness against null mutations. Nature 421, 63-66. (Pubitemid 36077084)
    • (2003) Nature , vol.421 , Issue.6918 , pp. 63-66
    • Gu, Z.1    Steinmetz, L.M.2    Gu, X.3    Scharfe, C.4    Davis, R.W.5    Li, W.-H.6
  • 20
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • DOI 10.1080/10635150390235520
    • Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52, 696-704. (Pubitemid 37365050)
    • (2003) Systematic Biology , vol.52 , Issue.5 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 21
    • 72349092525 scopus 로고    scopus 로고
    • Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: Characterization of XIP subfamily of aquaporins from evolutionary perspective
    • Gupta AB, Sankararamakrishnan R. 2009. Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective. BMC Plant Biology 20, 134.
    • (2009) BMC Plant Biology , vol.20 , pp. 134
    • Gupta, A.B.1    Sankararamakrishnan, R.2
  • 22
    • 33644808731 scopus 로고    scopus 로고
    • A novel plant major intrinsic protein in Physcomitrella patens most similar to bacterial glycerol channels
    • DOI 10.1104/pp.105.063198
    • Gustavsson S, Lebrun A-S, Norden K, Chaumont F, Johanson U. 2005. A novel plant major intrinsic protein in Physcomitrella patens most similar to bacterial glycerol channels. Plant Physiology 139, 287-295. (Pubitemid 43951612)
    • (2005) Plant Physiology , vol.139 , Issue.1 , pp. 287-295
    • Gustavsson, S.1    Lebrun, A.-S.2    Norden, K.3    Chaumont, F.4    Johanson, U.5
  • 23
    • 57749085421 scopus 로고    scopus 로고
    • Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli
    • DOI 10.1104/pp.108.122457
    • Hanada K, Zou C, Lehti-Shiu MD, Shinozaki K, Shiu SH. 2008. Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli. Plant Physiology 148, 993-1003. (Pubitemid 352847556)
    • (2008) Plant Physiology , vol.148 , Issue.2 , pp. 993-1003
    • Hanada, K.1    Zou, C.2    Lehti-Shiu, M.D.3    Shinozaki, K.4    Shiu, S.-H.5
  • 25
    • 0034870819 scopus 로고    scopus 로고
    • The complete set of genes encoding major intrinsic proteins in arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants
    • DOI 10.1104/pp.126.4.1358
    • Johanson U, Karlsson M, Johansson I, Gustavsson S, Slovall S, Fraysse L, Weig AR, Kjellbom P. 2001. The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. Plant Physiology 126, 1358-1369. (Pubitemid 32752366)
    • (2001) Plant Physiology , vol.126 , Issue.4 , pp. 1358-1369
    • Johanson, U.1    Karlsson, M.2    Johansson, I.3    Gustavsson, S.4    Sjovall, S.5    Fraysse, L.6    Weig, A.R.7    Kjellbom, P.8
  • 27
    • 33748625436 scopus 로고    scopus 로고
    • Functional aquaporin diversity in plants
    • DOI 10.1016/j.bbamem.2006.03.012, PII S0005273606000976, Auquporins
    • Kaldenhoff R, Fischer M. 2006. Functional aquaporin diversity in plants. Biochimica and Biophysica Acta 1758, 1134-1141. (Pubitemid 44376751)
    • (2006) Biochimica et Biophysica Acta - Biomembranes , vol.1758 , Issue.8 , pp. 1134-1141
    • Kaldenhoff, R.1    Fischer, M.2
  • 28
    • 59049099861 scopus 로고    scopus 로고
    • Genetic redundancy: New tricks for old genes
    • Kafri R, Springer M, Pilpel Y. 2009. Genetic redundancy: new tricks for old genes. Cell 136, 389-392.
    • (2009) Cell , vol.136 , pp. 389-392
    • Kafri, R.1    Springer, M.2    Pilpel, Y.3
  • 31
    • 43449126827 scopus 로고    scopus 로고
    • Jr-ZFP2, encoding a Cys2/His2-type transcription factor, is involved in the early stages of the mechano-perception pathway and specifically expressed in mechanically stimulated tissues in woody plants
    • DOI 10.1111/j.1365-3040.2008.01785.x
    • Leblanc-Fournier N, Coutand C, Crouzet J, Brunel N, Lenne C, Moulia B, Julien JL. 2008. Jr-ZFP2, encoding a Cys2/His2-type transcription factor, is involved in the early stages of the mechanoperception pathway and specifically expressed in mechanically stimulated tissues in woody plants. Plant, Cell and Environment 31, 715-726. (Pubitemid 351667674)
    • (2008) Plant, Cell and Environment , vol.31 , Issue.6 , pp. 715-726
    • Leblanc-Fournier, N.1    Coutand, C.2    Crouzet, J.3    Brunel, N.4    Lenne, C.5    Moulia, B.6    Julien, J.-L.7
  • 32
    • 34248233008 scopus 로고    scopus 로고
    • Plant aquaporins: Novel functions and regulation properties
    • DOI 10.1016/j.febslet.2007.03.021, PII S001457930700275X, Plant Transporters and Channels
    • Maurel C. 2007. Plant aquaporins: novel functions and regulation properties. FEBS Letters 581, 2227-2236. (Pubitemid 46726296)
    • (2007) FEBS Letters , vol.581 , Issue.12 , pp. 2227-2236
    • Maurel, C.1
  • 33
    • 0027192036 scopus 로고
    • The vacuolar membrane protein γ-TIP creates water specific channels in Xenopus oocytes
    • Maurel C, Reizer J, Schroeder JI, Chrispeels MJ. 1993. The vacuolar membrane protein c-TIP creates water specific channels in Xenopus oocytes. EMBO Journal 12, 2241-2247. (Pubitemid 23194173)
    • (1993) EMBO Journal , vol.12 , Issue.6 , pp. 2241-2247
    • Maurel, C.1    Reizer, J.2    Schroeder, J.I.3    Chrispeels, M.J.4
  • 35
    • 80051768906 scopus 로고    scopus 로고
    • The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic
    • Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. 2011. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. Journal of Experimental Botany 62, 4391-4398.
    • (2011) Journal of Experimental Botany , vol.62 , pp. 4391-4398
    • Mitani-Ueno, N.1    Yamaji, N.2    Zhao, F.J.3    Ma, J.F.4
  • 36
    • 79959916333 scopus 로고    scopus 로고
    • Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.)
    • Park W, Scheffler BE, Bauer PJ, Campbell BT. 2010. Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.). BMC Plant Biology 10, 142.
    • (2010) BMC Plant Biology , vol.10 , pp. 142
    • Park, W.1    Scheffler, B.E.2    Bauer, P.J.3    Campbell, B.T.4
  • 37
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl MW. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Research 29, 2003-2007.
    • (2001) Nucleic Acids Research , vol.29 , pp. 2003-2007
    • Pfaffl, M.W.1
  • 38
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations
    • DOI 10.1023/B:BILE.0000019559.84305.47
    • Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP. 2004. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations. Biotechnology Letters 26, 509-515. (Pubitemid 38448421)
    • (2004) Biotechnology Letters , vol.26 , Issue.6 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 39
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky HJ. 2000. Primer3 on the WWW for general users and for biologist programmers. Methods in Molecular Biology 132, 365-386.
    • (2000) Methods in Molecular Biology , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.J.2
  • 40
    • 58249119569 scopus 로고    scopus 로고
    • Improving plant stress tolerance and yield production: Is the tonoplast aquaporin SlTIP2;2 a key to isohydric to anisohydric conversion?
    • Sade N, Vinocur BJ, Diber A, Shatil A, Ronen G, Nissan H, Wallach R, Karchi H, MoshelionM. 2009. Improving plant stress tolerance and yield production: is the tonoplast aquaporin SlTIP2;2 a key to isohydric to anisohydric conversion? New Phytologist 181, 651-661.
    • (2009) New Phytologist , vol.181 , pp. 651-661
    • Sade, N.1    Vinocur, B.J.2    Diber, A.3    Shatil, A.4    Ronen, G.5    Nissan, H.6    Wallach, R.7    Karchi, H.8    Moshelion, M.9
  • 41
    • 26444617525 scopus 로고    scopus 로고
    • Identification of 33 rice aquaporin genes and analysis of their expression and function
    • DOI 10.1093/pcp/pci172
    • Sakurai J, Ishikawa F, Yamlaguchi T, Uemura M, Maeshima M. 2005. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant and Cell Physiology 46, 1568-1577. (Pubitemid 41436599)
    • (2005) Plant and Cell Physiology , vol.46 , Issue.9 , pp. 1568-1577
    • Sakurai, J.1    Ishikawa, F.2    Yamaguchi, T.3    Uemura, M.4    Maeshima, M.5
  • 42
    • 74549226522 scopus 로고    scopus 로고
    • Functional analysis of putative genes encoding the PIP2 water channel subfamily Populus trichocarpa
    • Secchi F, Maciver B, Zeidel ML, Zwieniecki MA. 2009. Functional analysis of putative genes encoding the PIP2 water channel subfamily Populus trichocarpa. Tree Physiology 29, 1467-1477.
    • (2009) Tree Physiology , vol.29 , pp. 1467-1477
    • Secchi, F.1    MacIver, B.2    Zeidel, M.L.3    Zwieniecki, M.A.4
  • 43
    • 77957725967 scopus 로고    scopus 로고
    • Patterns of PIP gene expression in Populus trichocarpa during recovery from xylem embolism suggest a major role for the PIP1 aquaporin subfamily as moderators of refilling process. Plant
    • Secchi F, Zwieniecki MA. 2010. Patterns of PIP gene expression in Populus trichocarpa during recovery from xylem embolism suggest a major role for the PIP1 aquaporin subfamily as moderators of refilling process. Plant, Cell and Environment 33, 1285-1297.
    • (2010) Cell and Environment , vol.33 , pp. 1285-1297
    • Secchi, F.1    Zwieniecki, M.A.2
  • 44
    • 71749115335 scopus 로고    scopus 로고
    • Identification and functional characterization of aquaporins in the grapevine, Vitis vinifera
    • Shelden MC, Howitt SM, Kaiser BN, Tyerman SD. 2009. Identification and functional characterization of aquaporins in the grapevine, Vitis vinifera. Functional Plant Biology 36, 1065-1078.
    • (2009) Functional Plant Biology , vol.36 , pp. 1065-1078
    • Shelden, M.C.1    Howitt, S.M.2    Kaiser, B.N.3    Tyerman, S.D.4
  • 45
    • 23144440940 scopus 로고    scopus 로고
    • PRALINE: A multiple sequence alignment toolbox that integrates homology-extended and secondary structure information
    • DOI 10.1093/nar/gki390
    • Simossis VA, Heringa J. 2005. PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information. Nucleic Acids Research 33, W289-W294. (Pubitemid 44529928)
    • (2005) Nucleic Acids Research , vol.33 , Issue.WEB. SERV. ISS.
    • Simossis, V.A.1    Heringa, J.2
  • 46
    • 32044470209 scopus 로고    scopus 로고
    • The diversification of flowering plants
    • Cracraft J, Donoghue MJ, eds Oxford: Oxford University Press
    • Soltis PS, Soltis DE, Chase MW, Endress PK, Crane PR. 2004. The diversification of flowering plants. In: Cracraft J, Donoghue MJ, eds. The tree of life. Oxford: Oxford University Press, 154-167.
    • (2004) The Tree of Life , pp. 154-167
    • Soltis, P.S.1    Soltis, D.E.2    Chase, M.W.3    Endress, P.K.4    Crane, P.R.5
  • 47
    • 10944230777 scopus 로고    scopus 로고
    • Duplication and divergence: The evolution of new genes and old ideas
    • DOI 10.1146/annurev.genet.38.072902.092831
    • Taylor JS, Raes J. 2004. Duplication and divergence: the evolution of new genes and old ideas. Annual Review of Genetics 38, 615-643. (Pubitemid 40017189)
    • (2004) Annual Review of Genetics , vol.38 , pp. 615-643
    • Taylor, J.S.1    Raes, J.2
  • 50
    • 3042583806 scopus 로고    scopus 로고
    • Homology modeling of representative subfamilies of Arabidopsis major intrinsic proteins. Classification based on the aromatic/arginine selectivity filter
    • DOI 10.1104/pp.103.033415
    • Wallace IS, Roberts DM. 2004. Homology modelling of representative subfamilies of Arabidopsis major intrinsic proteins. Classification based on the aromatic/arginine selectivity filter. Plant Physiology 135, 1059-1068. (Pubitemid 38819049)
    • (2004) Plant Physiology , vol.135 , Issue.2 , pp. 1059-1068
    • Wallace, I.S.1    Roberts, D.M.2
  • 51
    • 78149416568 scopus 로고    scopus 로고
    • Reference gene selection for quantitative real-time polymerase chain reaction in Populus
    • Xu M, Zhang B, Su X, Zhang S, Huang M. 2011. Reference gene selection for quantitative real-time polymerase chain reaction in Populus. Analytical Biochemistry 408, 337-339.
    • (2011) Analytical Biochemistry , vol.408 , pp. 337-339
    • Xu, M.1    Zhang, B.2    Su, X.3    Zhang, S.4    Huang, M.5


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