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1
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77955881507
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Optimized 5-h multiplex PCR test for the detection of tinea unguium: Performance in a routine PCR laboratory
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Description of a PCR test with simultaneous detection of any dermatophyte and T. rubrum specifically with the application of a 15-min DNA extraction procedure enabling a day-to-day diagnosis. This may be valuable to clinical laboratories using conventional PCR strategies for diagnosis of dermatophytosis.
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Brillowska-Dabrowska A, Nielsen SS, Nielsen HV, Arendrup MC. Optimized 5-h multiplex PCR test for the detection of tinea unguium: performance in a routine PCR laboratory. Med Mycol 2010; 48:828-831. Description of a PCR test with simultaneous detection of any dermatophyte and T. rubrum specifically with the application of a 15-min DNA extraction procedure enabling a day-to-day diagnosis. This may be valuable to clinical laboratories using conventional PCR strategies for diagnosis of dermatophytosis.
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Med Mycol
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Brillowska-Dabrowska, A.1
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Arendrup, M.C.4
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2
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77953954346
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Evaluation of a single-tube real-time PCR for detection and identification of 11 dermatophyte species in clinical material
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This study presents the most comprehensive real-time PCR assay allowing the simultaneous detection of 11 common dermatophytes. This is valuable to a clinical laboratory using real-time PCR-based methods
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Bergmans AM, van der Ent M, Klaassen A, et al. Evaluation of a single-tube real-time PCR for detection and identification of 11 dermatophyte species in clinical material. Clin Microbiol Infect 2010; 16:704-710. This study presents the most comprehensive real-time PCR assay allowing the simultaneous detection of 11 common dermatophytes. This is valuable to a clinical laboratory using real-time PCR-based methods.
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Bergmans, A.M.1
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3
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Trapped in keratin; a comparison of dermatophyte detection in nail, skin and hair samples directly from clinical samples using culture and real-time PCR
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This study evaluates a real-time PCR assay with 1437 clinical nail, skin and hair samples that allows the detection of any dermatophyte, four common Trichophyton species and Microsporum genus by two PCR assays. Another valuable approach for real-time PCR-based dermatophyte diagnostics
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Wisselink GJ, van Zanten E, Kooistra-Smid AM. Trapped in keratin; a comparison of dermatophyte detection in nail, skin and hair samples directly from clinical samples using culture and real-time PCR. J Microbiol Methods 2011; 85:62-66. This study evaluates a real-time PCR assay with 1437 clinical nail, skin and hair samples that allows the detection of any dermatophyte, four common Trichophyton species and Microsporum genus by two PCR assays. Another valuable approach for real-time PCR-based dermatophyte diagnostics.
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J Microbiol Methods
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This review provides the pros and cons of molecular diagnosis of superficial fungal infections
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Hay RJ, Jones RM. New molecular tools in the diagnosis of superficial fungal infections. Clin Dermatol 2010; 28:190-196. This review provides the pros and cons of molecular diagnosis of superficial fungal infections.
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[Epub ahead of print] This review covers the aspect of nondermatophyte mould onychomycosis and highlights the importance of classical diagnosis of nondermatophyte infections
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Gupta AK, Drummond-Main C, Cooper EA, et al. Systematic review of nondermatophyte mold onychomycosis: diagnosis, clinical types, epidemiology, and treatment. J Am Acad Dermatol 2011. [Epub ahead of print] This review covers the aspect of nondermatophyte mould onychomycosis and highlights the importance of classical diagnosis of nondermatophyte infections.
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Gupta, A.K.1
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Ebihara M, Makimura K, Sato K, et al. Molecular detection of dermatophytes and nondermatophytes in onychomycosis by nested polymerase chain reaction based on 28S ribosomal RNA gene sequences. Br J Dermatol 2009; 161:1038-1044.
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This article is to our knowledge the first study to link PCR with a subsequent microarray identification system allowing the comprehensive detection of human pathogenic fungi from skin samples. It also includes species-specific detection of 26 fungal pathogens. This study may be relevant to the clinical laboratory with capacity and interest in performing such post-PCR analysis
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Sato T, Takayanagi A, Nagao K, et al. Simple PCR-based DNA microarray system to identify human pathogenic fungi in skin. J Clin Microbiol 2010; 48:2357-2364. This article is to our knowledge the first study to link PCR with a subsequent microarray identification system allowing the comprehensive detection of human pathogenic fungi from skin samples. It also includes species-specific detection of 26 fungal pathogens. This study may be relevant to the clinical laboratory with capacity and interest in performing such post-PCR analysis.
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J Clin Microbiol
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Kim JY, Choe YB, Ahn KJ, Lee YW. Identification of dermatophytes using multiplex polymerase chain reaction. Ann Dermatol 2011; 23:304-312.
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16
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This study applies ELISA for the species-specific detection of five common dermatophytes. This approach can be applied in clinical laboratories where real-time PCR is unavailable
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Beifuss B, Bezold G, Gottlöber P, et al. Direct detection of five common dermatophyte species in clinical samples using a rapid and sensitive 24-h PCR-ELISA technique open to protocol transfer. Mycoses 2011; 54:137-145. This study applies ELISA for the species-specific detection of five common dermatophytes. This approach can be applied in clinical laboratories where real-time PCR is unavailable.
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17
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This is the largest clinical evaluation (4972 samples) of PCR diagnostics of dermatophytosis. The PCR is introduced as an initial screening method prior to classical diagnosis. However, no pan-fungal approach is included
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Alexander CL, Shankland GS, Carman W, Williams C. Introduction of a dermatophyte polymerase chain reaction assay to the diagnostic mycology service in Scotland. Br J Dermatol 2011; 164:966-972. This is the largest clinical evaluation (4972 samples) of PCR diagnostics of dermatophytosis. The PCR is introduced as an initial screening method prior to classical diagnosis. However, no pan-fungal approach is included.
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Br J Dermatol
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Alexander, C.L.1
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Comparison of a new commercial test, Dermatophyte-PCR kit, with conventional methods for rapid detection and identification of Trichophyton rubrum in nail specimens
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■■] and such study should inspire future external evaluations of molecular diagnostics
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■■] and such study should inspire future external evaluations of molecular diagnostics.
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Gräser Y, Scott J, Summerbell R. The new species concept in dermatophytes - a polyphasic approach. Mycopathologia 2008; 166:239-256.
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This study employs molecular research for the differentiation of zoophilic and anthropophilic dermatophytes according to the new species concept
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Heidemann S, Monod M, Gräser Y. Signature polymorphisms in the internal transcribed spacer region relevant for the differentiation of zoophilic and anthropophilic strains of Trichophyton interdigitale and other species of T. mentagrophytes sensu lato. Br J Dermatol 2010; 162:282-295. This study employs molecular research for the differentiation of zoophilic and anthropophilic dermatophytes according to the new species concept.
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Br J Dermatol
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Nenoff P, Herrmann J, Gräser Y. Trichophyton mentagrophytes sive interdigitale? A dermatophyte in the course of time. J Dtsch Dermatol Ges 2007; 5:198-202. (Pubitemid 46361350)
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25
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One Fungus = One Name: DNA and fungal nomenclature twenty years after PCR
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This study addresses the fungal nomenclature, which especially for dermatophyte taxonomy has been challenging. Novel species concepts and improved understanding in dermatophyte taxonomy may aid the development of species-specific molecular diagnostic methods
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Taylor JW. One Fungus = One Name: DNA and fungal nomenclature twenty years after PCR. IMA Fungus 2011; 2:113-120. This study addresses the fungal nomenclature, which especially for dermatophyte taxonomy has been challenging. Novel species concepts and improved understanding in dermatophyte taxonomy may aid the development of species-specific molecular diagnostic methods.
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Taylor, J.W.1
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This study showed that among 200 patients, dermatophytes are responsible for 85% of tinea pedis/onychomycosis cases. This article found no differences between athletes and controls regarding risk of dermatophytosis
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Sabadin CS, Benvegnú SA, da Fontoura MMC, et al. Onychomycosis and tinea pedis in athletes from the State of Rio Grande Do Sul (Brazil): a crosssectional study. Mycopathologia 2011; 171:183-189. This study showed that among 200 patients, dermatophytes are responsible for 85% of tinea pedis/onychomycosis cases. This article found no differences between athletes and controls regarding risk of dermatophytosis.
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This review performs a meta-regression analysis enabling recommendations for Aspergillus PCR regarding setup, DNA extraction and sample processing. The study highlights that the efficiency is limited by the DNA extraction procedure and not the PCR amplifications. This is a relevant study not only for Aspergillus but also generally for PCR-based diagnostics
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White PL, Bretagne S, Klingspor L, et al. Aspergillus PCR: one step closer to standardization. J Clin Microbiol 2010; 48:1231-1240. This review performs a meta-regression analysis enabling recommendations for Aspergillus PCR regarding setup, DNA extraction and sample processing. The study highlights that the efficiency is limited by the DNA extraction procedure and not the PCR amplifications. This is a relevant study not only for Aspergillus but also generally for PCR-based diagnostics.
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Evaluation of internal transcribed spacer 2-RFLP analysis for the identification of dermatophytes
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43
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80054960490
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Strains differentiation of Microsporum canis by RAPD analysis using (GACA)4 and (ACA)5 primers
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Dobrowolska A, Debska J, Kozłowska M, Staczek P. Strains differentiation of Microsporum canis by RAPD analysis using (GACA)4 and (ACA)5 primers. Pol J Microbiol 2011; 60:145-148.
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Dobrowolska, A.1
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Kozłowska, M.3
Staczek, P.4
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44
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79956072154
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Identification and differentiation of Trichophyton rubrum clinical isolates using PCRRFLP and RAPD methods
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This study presents the molecular identification and genotyping techniques of T. rubrum. The genotyping revealed 47 different genotypes among 55 isolates
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Hryncewicz-Gwóźdź A, Jagielski T, Dobrowolska A, et al. Identification and differentiation of Trichophyton rubrum clinical isolates using PCRRFLP and RAPD methods. Eur J Clin Microbiol Infect Dis 2011; 30:727-731. This study presents the molecular identification and genotyping techniques of T. rubrum. The genotyping revealed 47 different genotypes among 55 isolates.
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Hryncewicz-Gwóźdź, A.1
Jagielski, T.2
Dobrowolska, A.3
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45
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77951797946
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Molecular typing of Trichophyton mentagrophytes var. interdigitale isolated in a university hospital in Japan based on the nontranscribed spacer region of the ribosomal RNA gene
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This study presents molecular genotyping technique of T. interdigitale. Fifteen different genotypes among 65 isolates were identified
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Wakasa A, Anzawa K, Kawasaki M, Mochizuki T. Molecular typing of Trichophyton mentagrophytes var. interdigitale isolated in a university hospital in Japan based on the nontranscribed spacer region of the ribosomal RNA gene. J Dermatol 2010; 37:431-440. This study presents molecular genotyping technique of T. interdigitale. Fifteen different genotypes among 65 isolates were identified.
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J Dermatol
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Wakasa, A.1
Anzawa, K.2
Kawasaki, M.3
Mochizuki, T.4
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46
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Molecular typing of Epidermophyton floccosum isolated from patients with dermatophytosis by RAPD-PCR
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Khosravi A, Behzad F, Sabokbar A, et al. Molecular typing of Epidermophyton floccosum isolated from patients with dermatophytosis by RAPD-PCR. J Basic Microbiol 2010; 50 (Suppl. 1):S68-S73.
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Khosravi, A.1
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Sabokbar, A.3
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47
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84858002921
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Identification of rare macroconidia-producing dermatophytic fungi by real-time PCR
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[Epub ahead of print] This study described a real-time PCR-based method for the identification of 10 taxonomically distinct and rare macroconidia-producing dermatophytes. Such method is a valuable supplement to the classical laboratory and may potentially be adapted to a diagnostic method for the direct detection in the clinical sample
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Yüksel T, Ilkit M. Identification of rare macroconidia-producing dermatophytic fungi by real-time PCR. Med Mycol 2011. [Epub ahead of print] This study described a real-time PCR-based method for the identification of 10 taxonomically distinct and rare macroconidia-producing dermatophytes. Such method is a valuable supplement to the classical laboratory and may potentially be adapted to a diagnostic method for the direct detection in the clinical sample.
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(2011)
Med Mycol
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Yüksel, T.1
Ilkit, M.2
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48
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84858006929
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Trichophyton bullosum: A new zoonotic dermatophyte species
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[Epub ahead of print] This study presents a novel zoophilic dermatophyte species T. bullosum which is closely related to A. benhamiae
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Sitterle E, Frealle E, Foulet F, et al. Trichophyton bullosum: a new zoonotic dermatophyte species. Med Mycol 2011. [Epub ahead of print] This study presents a novel zoophilic dermatophyte species T. bullosum which is closely related to A. benhamiae.
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Med Mycol
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Sitterle, E.1
Frealle, E.2
Foulet, F.3
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49
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84858004749
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Microsporum mirabile and its teleomorph Arthroderma mirabile, a new dermatophyte species in the M. cookei clade
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[Epub ahead of print] This study presents the novel M. mirabile species and its teleomorphic state. Molecular identification revealed that this species is significantly different from other taxa
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Choi JS, Gräser Y, Walther G, et al. Microsporum mirabile and its teleomorph Arthroderma mirabile, a new dermatophyte species in the M. cookei clade. Med Mycol 2011. [Epub ahead of print] This study presents the novel M. mirabile species and its teleomorphic state. Molecular identification revealed that this species is significantly different from other taxa.
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(2011)
Med Mycol
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Choi, J.S.1
Gräser, Y.2
Walther, G.3
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