River fragmentation increases localized population genetic structure and enhances asymmetry of dispersal in bullhead (Cottus gobio)

Conservation Genetics

Volumn 13, Issue 2, 2012, Pages 545-556

  Junker, Julian ^a,b   Peter, Armin ^a   Wagner, Catherine E ^a,c   Mwaiko, Salome ^a   Germann, Brigitte ^a   Seehausen, Ole ^a,b   Keller, Irene ^a  

^a SWISS FEDERAL INSTITUTE OF AQUATIC SCIENCE AND TECHNOLOGY   (Switzerland)

^b UNIVERSITY OF BERN   (Switzerland)

^c Department of Obstetrics Gynecology   (United States)

Author keywords

Bullhead; Conservation; Cottus gobio; Fragmentation; Microsatellites; Population genetic structure

Indexed keywords

ASYMMETRY; CONSERVATION GENETICS; DATA SET; EXTINCTION RISK; FISH; GENE FLOW; GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC STRUCTURE; HABITAT FRAGMENTATION; HUMAN ACTIVITY; SAMPLING; VULNERABILITY; WATER FLOW;

COTTUS GOBIO;

EID: 84858002838     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-011-0306-x     Document Type: Article

References (70)

1. Adamicka P (1979) Zwei Vorurteile über die Schädlichkeit von Koppen und Kaulquappen. Österreichs Fischerei 32: 162-164.
2. Adamicka P (1984) Neues vom 'argen Laichräuber' (Cottus gobio). Österreichs Fischerei 31: 334-336.
3. Anderson EC, Dunham KK (2008) The influence of family groups on inferences made with the program Structure. Mol Ecol Resour 8: 1219-1229.
4. Andreasson S (1971) Feeding habits of a sculpin (Cottus gobio L. Pisces) population. Report of the institute of freshwater research, Drottningholm, Sweden, 51: 5-30.
5. Barandun J (1990) Auswirkungen von ausbreitungsobstruktionen auf das Vorkommen von Groppen (Cottus gobio) - Anregungen für den Artenschutz. Natur und Landschaft 65: 66-68.
6. Bisazza A, Marconato A (1988) Female mate choice, male-male competition and parental care in the river bullhead, Cottus gobio L. (Pisces, Cottidae). Anim Behav 36: 1352-1360.
7. Bless R (1981) Untersuchungen zum Einfluss von gewässerbaulichen Massnahmen auf die Fischfauna in Mittelgebirgsbächen. Natur und Landschaft 56: 243-252.
8. Bless R (1990) Die Bedeutung von gewässerbaulichen Hindernissen im Raum-Zeit-System der Groppe (Cottus gobio L.). Natur und Landschaft 65: 581-585.
9. Bucher F, Hofer R, Salvenmoser W (1992) Effects of treated paper mill effluents on hepatic morphology in male bullhead (Cottus gobio L.). Arch Environ Contam Toxicol 23: 410-419.
10. Caldera EJ, Bolnick DI (2008) Effects of colonization history and landscape structure on genetic variation within and among threespine stickleback (Gasterosteus aculeatus) populations in a single watershed. Evol Ecol Res 10: 575-598.
11. Cavalli-Sforza LL, Edwards AW (1967) Phylogenetic analysis. Models and estimation procedures. Am J Hum Genet 19: 233-257.
12. Downhower JF, Lejeune P, Gaudin P, Brown L (1990) Movements of the chabot (Cottus gobio) in a small stream. Polskie Archiwum Hydrobiologii 37: 119-126.
13. Elliot JM (1981) Some aspects of thermal tolerance of freshwater teleosts. In: Pickering AD (ed) Stress and fish. Academic Press, UK, pp 209-245.
14. Englbrecht CC, Largiadèr CR, Hänfling B, Tautz D (1999) Isolation and characterization of polymorphic microsatellite loci in the European bullhead Cottus gobio L. (Osteichthyes) and their applicability to related taxa. Mol Ecol 8: 1966-1969.
15. Englbrecht CC, Freyhof J, Nolte A, Rassmann K, Schliewen U, Tautz D (2000) Phylogeography of the bullhead Cottus gobio (Pisces: Teleostei: Cottidae) suggests a pre-pleistocene origin of the major central European populations. Mol Ecol 9: 709-722.
16. Excoffier L, Laval G, Schneider S (2005) Arlequin (version 3. 0): an integrated software package for population genetics data analysis. Evol Bioinformatics 1: 47-50.
17. Excoffier L, Foll M, Petit RJ (2009) Genetic consequences of range expansions. Ann Rev Eco Evol Syst 40: 481-501.
18. Faubet P, Waples RS, Gaggotti OE (2007) Evaluating the performance of a multilocus Bayesian method for the estimation of migration rates. Mol Ecol 16: 1149-1166.
19. Felsenstein J (1993) PHYLIP (Phylogeny Inference Package) version 3. 5c. Distributed by the author. Department of Genetics, University of Washington, Seattle.
20. Frankel OH, Soule M (1981) Conservation and Evolution. Cambridge University Press, Cambridge.
21. Frankham R (1995) Effective population size/adult population size ratios in wildlife: a review. Genet Res 66: 95-107.
22. Gädtgens A (1989) Die Rolle der Groppe (Cottus gobio L.) als Konsument des Zoobenthos im Ökosystem eines Mittelgebirgs-baches (Steine/Schwarzwald). Diplomarbeit. Fakultät für Biologie der Universität Konstanz 62.
23. Gaudin P (1985) Predation Exercée par le Chabot (Cottus gobio L.) sur I'Alevin de Truite Commune (Salmo trutta l.): taille maximale de capture des alevins par les chabots. Hydrobiologia 122: 267-270.
24. Gaudin P, Caillere L (1990) Microdistribution of Cottus gobio L. and fry of Salmotrutta in a first order stream. Pol Arch Hydrobiol 37: 81-93.
25. Gaudin P, Heland M (1984) Influenced'Adultes de Chabots (Cottus gobio L.) sur des Alevins de TruiteCommune (SalmotruttaL.): etude experimentale en milieux semi-naturels. Aria Oecol 5: 71-83.
26. Goldmann K (1993) Einfluss von Querbauwerken in einem voralpinen Fliessgewässer auf die Fischpopulationen. Diplomarbeit, Albert-Ludwigs-Universität Freiburg im Breisgau, Fakultät für Biologie.
27. Goslee SC, Urban DL (2007) The ecodist package for dissimilarity-based analysis of ecological data. J Stat Softw 22: 1-19.
28. Goudet J (1995) Fstat (Version 1. 2): a computer program to calculate F-statistics. J Hered 86: 485-486.
29. Hänfling B, Weetman D (2006) Concordant genetic estimators of migration reveal anthropogenically enhanced source-sink population structure in the river sculpin Cottus gobio. Genetics 173: 1487-1501.
30. Hänfling B, Hellemans B, Volckaert FAM, Carvalho GR (2002) Late glacial history of the cold-adapted freshwater fish Cottus gobio, revealed by microsatellites. Mol Ecol 11: 1717-1729.
31. Hansen MM, Nielsen EE, Mensberg KLD (1997) The problem of sampling families rather than populations: relatedness among individuals in samples of juvenile brown trout Salmo trutta L. Mol Ecol 6: 469-474.
32. Hofer R, Bucher F (1991) Zur Biologie und Gefährdung der Koppe. Österreichs Fischerei 44: 158-161.
33. Jones OR, Wang J (2010) Colony: a program for parentage and sibship inference from multilocus genotype data. Mol Ecol Resour 10: 551-555.
34. Jungwirth M (1996) Bypass channels at weirs as appropriate aids for fish migration in lithoral rivers. Regul Rivers: Res Manag 12: 483-492.
35. ™).
36. Keller I, Nentwig W, Largiadèr CR (2004) Recent habitat fragmentation due to roads can lead to significant genetic differentiation in an abundant flightless ground beetle. Mol Ecol 13: 2983-2994.
37. Kindlmann P, Burel F (2008) Connectivity measures: a review. Landsc Ecol 23: 879-890.
38. Knaepkens G, Knapen D, Bervoets L, Hänfling B, Verheyen E, Eens M (2002) Genetic diversity and condition factor: a significant relationship in Flemish but not in German populations of the European bullhead (Cottus gobio L.). Heredity 89: 280-287.
39. Knaepkens G, Bruyndoncx L, Eens M (2004a) Assessment of residency and movement of the endangered bullhead (Cottus gobio) in two Flemish rivers. Ecol Freshw Fish 13: 317-322.
40. Knaepkens G, Bruyndoncx L, Coeck J, Eens M (2004b) Spawning habitat enhancement in the European bullhead (Cottus gobio), an endangered freshwater fish in degraded lowland rivers. Biodivers Conserv 13: 2443-2452.
41. Letcher BH, Nislow KH, Coombs JA, O'Donnell MJ, Dubreuil TL (2007) Population response to habitat fragmentation in a stream-dwelling brook trout population. PLoS ONE 2(11): e1139.
42. Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Res 27: 209-220.
43. Meirmans PG, van Tienderen PH (2004) GENOTYPE and GENODIVE: two programs for the analysis of genetic diversity of asexual organisms. Mol Ecol Notes 4: 792-794.
44. Meldgaard T, Nielsen EE, Loeschcke V (2003) Fragmentation by Weirs in a Riverine system: a study of genetic variation in time and space among populations of European grayling (Thymallus thymallus) in a Danish river system. Conserv Genet 4: 735-747.
45. Müller K (1954) Investigations on the organic drift in North Swedish streams. Inst Freshw Res Rep 34: 133-149.
46. Nolte AW, Freyhof J, Stemshorn KC, Tautz D (2005a) An invasive lineage of sculpins, Cottus sp (Pisces, Teleostei) in the Rhine with new habitat adaptations has originated from hybridization between old phylogeographic groups. Proc Royal Soc B 272: 2379-2387.
47. Nolte AW, Stemshorn KC, Tautz D (2005b) Direct cloning of microsatellite loci from Cottus gobio through a simplified enrichment procedure. Mol Ecol Notes 5: 628-636.
48. Peakall R, Smouse PE (2006) Genalex 6: genetic analysis in excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
49. Peterka J, Vašek M, Kubečka J, Hladík M, Hohausová E (2004) Drift of juveniles after riverine spawning of fishes from the Římov reservoir, Czech Republic. Ecohydrol Hydrobiol 4(4): 459-468.
50. Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
51. Raeymaekers JAM, Raeymaekers D, Koizumi I, Geldof S, Volckaert FAM (2009) Guidelines for restoring connectivity around water mills: a population genetic approach to the management of riverine fish. J Appl Ecol 46: 562-571.
52. R Development Core Team (2010) R: a language and environment for statistical computing. R foundation for statistical computing. Vienna, Austria. http://www. R-project. org.
53. Rosenzweig ML (2001) Loss of speciation rate will impoverish future diversity. Proc Natl Acad Sci USA 98(10): 5404-5410.
54. Rousset F (1997) Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 145: 1219-1228.
55. Sala OE, Stuart Chapin III F, Armesto JJ et al (2000) Global biodiversity scenarios for the year 2100. Science 287(5459): 1770-1774.
56. Segelbacher G, Cushman SA, Epperson BK, Fortin MJ, Francois O, Hardy OJ, Holderegger R, Taberlet P, Waits LP, Manel S (2010) Applications of landscape genetics in conservation biology: concepts and challenges. Conserv Genet 11: 375-385.
57. Smyly WJP (1957) The life-history of the bullhead or miller's thumb (Cottus gobio L.). Proc Zool Soc Lond 128: 431-453.
58. Späh H, Beisenherz W (1984) Beitrag zur Ökologie und Verbreitung der Groppe (Cottus gobio, Pisces) in Ostwestfalen und in Osnabrück (Niedersachsen). Verh Ges Ökologie 12: 617-626.
59. Starmach J (1965) Koppen in den Karpathenflüssen: II. Auftreten und Charakteristik der Buntflossenkoppe (Cottus poecilopus Heckel) und Weissflossigen Koppe (Cottus gobio L.) in Raba Flussgebiet. Acta Hydrobiol 7: 109-140.
60. Tudorache C, Viaene P, Blust R, Vereecken H, De Boeck G (2008) A comparison of swimming capacity and energy use in seven European freshwater fish species. Ecol Freshw Fish 17: 284-291.
61. Utzinger J, Roth C, Peter A (1998) Effects of environmental parameters on the distribution of bullhead Cottus gobio with particular consideration of the effects of obstructions. J Appl Ecol 35: 882-892.
62. Vonlanthen P, Excoffier L, Bittner D, Persat H, Neuenschwander S, Largiader CR (2007) Genetic analysis of potential postglacial watershed crossings in Central Europe by the bullhead (Cottus gobio L.). Mol Ecol 16: 4572-4584.
63. Waters TF (1972) Drift of stream insects. Annu Rev Entomol 17: 253-272.
64. Waterstraat A (1992) Investigations on the ecology of Cottus gobio L. and other fish species from two lowland streams of Northern Germany. Limnologica 22: 137-149.
65. Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
66. Williams BL, Brawn JD, Page KN (2003) Landscape Scale genetic effects of habitat fragmentation on a high gene flow species: Speyeriaidalia (Nymphalidae). Mol Ecol 12: 11-20.
67. Wilson GA, Rannala B (2003) Bayesian inference of recent migration rates using multilocus genotypes. Genetics 163: 1177-1191.
68. Yamamoto S, Morita K, Koizumi I, Maekawa K (2004) Genetic differentiation of white-spotted charr (Salvelinus leucomaenis) populations after habitat fragmentation: spatial-temporal changes in gene frequencies. Conserv Genet 5: 529-538.
69. Zaugg B, Stucki P, Pedroli JC, Kirchhofer A (2003) Pisces Atlas. Fauna Helvetica 7.
70. Zeh Weissmann H, Könitzer C, Bertiller A (2009) Strukturen der Fliessgewässer in der Schweiz. Zustand von Sohle, Ufer und Umland (Ökomorphologie); Ergebnisse der Ökomorphologi-schen Kartierung. Stand: April 2009. Umwelt-Zustand Nr. 0926.