Recent habitat fragmentation due to roads can lead to significant genetic differentiation in an abundant flightless ground beetle

Molecular Ecology

Volumn 13, Issue 10, 2004, Pages 2983-2994

  Keller, I ^a,b   Nentwig, W ^a,c   Largiader C R ^a  

^a UNIVERSITY OF BERN   (Switzerland)

^b QUEEN MARY UNIVERSITY OF LONDON   (United Kingdom)

^c Department of Ecology ^*

Author keywords

Abax parallelepipedus; Carabidae; Genetic differentiation; Habitat fragmentation; Mark recapture; Microsatellite

Indexed keywords

MICROSATELLITE DNA;

ANALYSIS OF VARIANCE; ANIMAL; ARTICLE; BEETLE; COMPARATIVE STUDY; COMPUTER SIMULATION; ENVIRONMENT; GENETIC VARIABILITY; GENETICS; POPULATION DENSITY; POPULATION DYNAMICS; POPULATION GENETICS; SWITZERLAND;

ANALYSIS OF VARIANCE; ANIMALS; BEETLES; COMPUTER SIMULATION; ENVIRONMENT; GENETICS, POPULATION; MICROSATELLITE REPEATS; POPULATION DENSITY; POPULATION DYNAMICS; SWITZERLAND; VARIATION (GENETICS);

ABAX; ABAX PARALLELEPIPEDUS; CARABIDAE; COLEOPTERA; INSECTA; INVERTEBRATA;

EID: 4644364861     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2004.02310.x     Document Type: Article

References (49)

1. Abildsnes J, Tommerås BA (2000) Impacts of experimental habitat fragmentation on ground beetles (Coleoptera, Carabidae) in a boreal spruce forest. Annales Zoologici Fennici, 37, 201 -212.
2. Amos W, Balmford A (2001) When does conservation genetics matter? Heredity, 87, 257-265.
3. Assmann T (1999) The ground beetle fauna of ancient and recent woodlands in the lowlands of north-west Germany (Coleoptera, Carabidae). Biodiversity and Conservation, 8, 1499-1517.
4. Balloux F (2001) EASYPOP version 1.7: a computer program for the simulation of population genetics. Journal of Heredity, 92, 301-302.
5. Belkhir K, Castric V, Bonhomme F (2002) Identix, a software to test for relatedness in a population using permutation methods. Molecular Ecology Notes, 2, 611-614.
6. den Boer PJ (1990) The survival value of dispersal in terrestrial arthropods. Biological Conservation, 54, 175-192.
7. Brooker L, Brooker M (2002) Dispersal and population dynamics of the blue-breasted fairy-wren, Malurus pulcherrimus, in fragmented habitat in the Western Australian wheatbelt. Wildlife Research, 29, 225-233.
8. Brouat C, Sennedot F, Audiot P, Leblois R, Rasplus JY (2003) Fine-scale genetic structure of two carabid species with contrasted levels of habitat specialization. Molecular Ecology, 12, 1731-1745.
9. Charrier S, Petit S, Burel F (1997) Movements of Abax parallelepipedus (Coleoptera, Carabidae) in woody habitats of a hedgerow network landscape: a radio-tracing study. Agriculture, Ecosystems and Environment, 61, 133-144.
10. Davies KF, Margules CR (1998) Effects of habitat fragmentation on carabid beetles: experimental evidence. Journal of Animal Ecology, 67, 460-471.
11. El Mousadik A, Petit RJ (1996) High level of genetic differentiation for allelic richness among populations of the argan tree (Argania spinosa (L.) Skeels) endemic to Morocco. Theoretical and Applied Genetics, 92, 832-839.
12. Estoup A, Cornuet JM (1999) Microsatellite evolution: inferences from population data. In: Microsatellites - Evolution and Applications (eds Goldstein DB, Schlötterer C), pp. 49-65. Oxford University Press, Oxford.
13. Estoup A, Largiadèr CR, Perrot E, Chourrout D (1996) Rapid one tube DNA extraction for reliable PCR detection of fish polymorphic markers and transgenes. Molecular Marine Biology and Biotechnology, 5, 295-298.
14. Franceschini G, Cannavacciuolo M, Burel F (1997) A geostatistical analysis of the spatial distribution of Abax parallelepipedus (Coleoptera, Carabidae) in a woodlot. European Journal of Soil Biology, 33, 117-122.
15. Frankham R (1995) Effective population size/adult population size ratios in wildlife: a review. Genetical Research, 66, 95-107.
16. Garza JC, Williamson EG (2001) Detection of reduction in population size using data from microsatellite loci. Molecular Ecology, 10, 305-318.
17. Gonzalez A, Lawton JH, Gilbert FS, Blackburn TM, Evans-Freke I (1998) Metapopulation dynamics, abundance, and distribution in a microecosystem. Science, 281, 2045-2047.
18. Goudet J (2001) FSTAT, a Program to Estimate and Test Gene Diversities and Fixation Indices, Version 2.9.3. Department of Ecology and Evolution, University of Lausanne, Switzerland [available at: http:// www.unil.ch/izea/ softwares/fstat.html].
19. Goudet J, Raymond M, de Meeüs T, Rousset F (1996) Testing differentiation in diploid populations. Genetics, 144, 1933-1940.
20. Guo SW, Thompson E (1992) Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics, 48, 361-372.
21. Halme E, Niemelä J (1993) Carabid beetles in fragments of coniferous forest. Annales Zoologici Fennici, 30, 17-30.
22. Hartl DL, Clark AG (1997) Principles of Population Genetics, 3rd edn. Sinauer Associates, Sunderland, MA.
23. Hedrick PW (2000) Genetics of Populations, 2nd edn. Jones and Bartlett Publishers, Sudbury, MA.
24. Hines JE (1988) JOLLY. Patuxent Wildlife Research Center, Laurel. MD, USA [available at: http://www.mbr-pwrc.usgs.gov/ software.html].
25. Jarne P, Lagoda PJL (1996) Microsatellites, from molecules to populations and back. Trends in Ecology and Evolution, 11, 424-429.
26. Jolly GM (1965) Explicit estimates from capture-recapture data with both death and immigration - stochastic model. Biometrika, 52, 225-247.
27. Keller I, Largiadèr CR (2003a) Recent habitat fragmentation due to major roads leads to reduction of gene flow and loss of genetic variability in ground beetles. Proceedings of the Royal Society Series B, 270, 417-423.
28. Keller I, Largiadèr CR (2003b) Five microsatellite DNA markers for the ground beetle Abax parallelepipedus (Coleoptera, Carabidae). Molecular Ecology Notes, 3, 113-114.
29. Keller LF, Waller DM (2002) Inbreeding effects in wild populations. Trends in Ecology and Evolution, 17, 230-241.
30. Lande R (1988) Genetics and demography in biological conservation. Science, 241, 1455-1460.
31. Loreau M (1990) Competition in a carabid beetle community: a field experiment. Oikos, 58, 25-38.
32. Loreau M, Nolf CL (1993) Occupation of space by the carabid beetle Abax ater. Acta Oecologica, 14, 247-258.
33. Luikart G, Allendorf FW, Cornuet JM, Sherwin WB (1998) Distortion of allele frequency distributions provides a test for recent population bottlenecks. Journal of Heredity, 89, 238-247.
34. Mader HJ (1984) Animal habitat isolation by roads and agricultural fields. Biological Conservation, 29, 81-96.
35. Marggi WA (1992) Faunistik der Sandlaufkäfer und Laufkäfer der Schweiz (Cicindelidae and Carabidae) Coleoptera. Centre suisse de cartographie de la faune, Neuchâtel.
36. Moran MD (2003) Arguments for rejecting the sequential Bonferroni in ecological studies. Oikos, 100, 403-405.
37. Mühlenberg M (1993) Freilandökologie, 3rd edn. Quelle & Meyer, Heidelberg.
38. Niemelä J (2001) Carabid beetles (Coleoptera: Carabidae) and habitat fragmentation: a review. European Journal of Entomology, 98, 127-130.
39. Peakall R, Ruibal M, Lindenmayer DB (2003) Spatial autocorrelation analysis offers new insights into gene flow in the Australian bush rat, Rattus fuscipes. Evolution, 57, 1182-1195.
40. Peakall R, Smouse PE (2001) GENALEX V5: Genetic Analysis in Excel. Population Genetic Software for Teaching and Research. Australian National University, Canberra, Australia [available at: http:// www.anu.edu.au/BoZo/ GenAlEx].
41. Piry S, Alapetite A, Cornuet JM, Paetkau D, Baudouin L, Estoup A (2004) GENECLASS2: a Software for Genetic Assignment and First Generation Migrants Detection. INRA, Montpellier, France [available at: http://www.montpellier.inra. fr/URLB/GeneClass2/Help].
42. Primack RB (1993) Essentials of Conservation Biology. Sinauer Associates Inc, Sunderland, MA.
43. Rannala B, Mountain JL (1997) Detecting immigration by using multilocus genotypes. Proceedings of the National Academy of Sciences USA, 94, 9197-9201.
44. Schneider S, Roessli D, Excoffier L (2000) ARLEQUIN, Version 2.000: a Software for Population Genetics Data Analysis, Genetics and Biometry Laboratory, University of Geneva, Switzerland [available at: http://lgb.unige.ch/arlequin].
45. Stow AJ, Sunnucks P, Briscoe DA, Gardener MG (2001) The impact of habitat fragmentation on dispersal in Cunningham's skink (Egernia cunninghami): evidence from allelic and genotypic analyses of microsatellites. Molecular Ecology, 10, 867-878.
46. Sunnucks P (2000) Efficient genetic markers for population biology. Trends in Ecology and Evolution, 15, 199-203.
47. Thiele HU (1977) Carabid Beetles in Their Environments. Springer-Verlag, Berlin.
48. Turin H, den Boer PJ (1988) Changes in the distribution of carabid beetles in the Netherlands since 1880. II. Isolation of habitats and long-term time trends in the occurrence of carabid species with different powers of dispersal (Coleoptera, Carabidae). Biological Conservation, 44, 179-200.
49. Wachmann E, Platen R, Barndt D (1995) Laufkäfer - Beobachtung, Lebensweise. Naturbuch Verlag, Augsburg.