Diversification of schistosoma japonicum in Mainland China revealed by mitochondrial DNA

PLoS Neglected Tropical Diseases

Volumn 6, Issue 2, 2012, Pages

  Zhao, Qin Ping ^a,b   Jiang, Ming Sen ^a   Dong, Hui Fen ^a   Nie, Pin ^b  

^a WUHAN UNIVERSITY   (China)

^b INSTITUTE OF HYDROBIOLOGY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

ARTICLE; CHINA; CORRELATION ANALYSIS; FEMALE; GENE FLOW; GENETIC DISTANCE; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE; MALE; MICROBIAL DIVERSITY; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PARASITE CONTROL; PHYLOGENETIC TREE; POLYMERASE CHAIN REACTION; SCHISTOSOMA JAPONICUM; SEQUENCE ALIGNMENT; SNAIL; UNINDEXED SEQUENCE; ANIMAL; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; DISEASE MODEL; DNA SEQUENCE; GASTROPOD; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PARASITOLOGY; PHYLOGEOGRAPHY; SCHISTOSOMIASIS JAPONICA;

ANIMALS; CHINA; CLUSTER ANALYSIS; DISEASE MODELS, ANIMAL; DNA, MITOCHONDRIAL; FEMALE; GASTROPODA; GENETIC VARIATION; MALE; MICE; MOLECULAR SEQUENCE DATA; PHYLOGEOGRAPHY; SCHISTOSOMA JAPONICUM; SCHISTOSOMIASIS JAPONICA; SEQUENCE ANALYSIS, DNA;

EID: 84857883367     PISSN: 19352727     EISSN: 19352735     Source Type: Journal    
DOI: 10.1371/journal.pntd.0001503     Document Type: Article

References (48)

1. Chitsulo L, Engels D, Montresor A, Savioli L, (2000) The global status of schistosomiasis and its control. Acta Trop 77: 41-51.
2. King CH, Sturrock RF, Kariuki HC, Hamburger J, (2006) Transmission control for schistosomiasis- why it matters now. Trends Parasitol 22: 575-582.
3. Hotez PJ, Molyneux DH, Fenwick A, Kumaresan J, Sachs SE, et al. (2007) Control of Neglected Tropical Diseases. N Eng J Med 357: 1018-1027.
4. Hao Y, Zheng H, Zhu R, Guo J, Wang L, et al. (2010) Schistosomiasis situation in People's Republic of China in 2009. Chin J Schisto Control 22: 521-527 (In Chinese).
5. Ross AG, Sleigh AC, Li Y, Davis GM, Williams GM, et al. (2001) Schistosomiasis in the People's Republic of China: prospects and challenges for the 21st century. Clin Microbiol Rev 14: 270-295.
6. Shrivastava J, Qian BZ, McVean G, Webster JP, (2005) An insight into the genetic variation of Schistosoma japonicum in mainland China using DNA microsatellite markers. Mol Ecol 14: 839-849.
7. Engels D, Chitsulo L, Montresor A, Savioli L, (2002) The global epidemiological situation of schistosomiasis and new approaches to control and research. Acta Trop 82: 139-146.
8. Bergquist R, Tanner M, (2010) Controlling schistosomiasis in Southeast Asia: a tale of two countries. Adv Parasitol 72: 109-144.
9. Zhou XN, Wang LY, Chen MG, Wu XH, Jiang QW, et al. (2005) The public health significance and control of schistosomiasis in China- then and now. Acta Trop 96: 96-105.
10. Zhou XN, Bergquist R, Leonardo L, Yang GJ, Yang K, et al. (2010) Schistosomiasis japonica control and research needs. Adv Parasitol 72: 145-178.
11. Hagan P, Gryseels B, (1994) Schsitosomiasis research and the European Community. Trop Geogr Med 46: 259-268.
12. McGarvey ST, Zhou XN, Willingham AL 3rd, Feng Z, Olveda R, (1999) The epidemiology and host-parasite relationships of Schistosoma japonicum in definitive hosts. Parasitol Today 15: 214-215.
13. Liu YY, Lou TK, Wang YX, Zhang WZ, (1981) Subspecific differentiation of oncomelanid snails. Acta Zootaxon Sin 6: 253-267 (In Chinese).
14. Davis GM, Zhang Y, Guo YH, Spolsky CM, (1995) Population genetics and systematic status of Oncomelania hupensis (Gastropoda: Pomatiopsidae) throughout China. Malacologia 37: 133-156.
15. Wilke T, Davis GM, Chen C-E, Zhou X-N, Zeng XP, et al. (2000) Oncomelania hupensis (Gastropoda: Rissooidea) in eastern China: molecular phylogeny, population structure, and ecology. Acta Trop 77: 215-227.
16. Zhao QP, Jiang MS, Littlewood DTJ, Nie P, (2010) Distinct genetic diversity of Oncomelania hupensis, intermediate host of Schistosoma japonicum in mainland China as revealed by ITS sequences. PLoS Negl Trop Dis 4: e611.
17. Curtis J, Minchella DJ, (2000) Schistosome population genetic structure: when clumping worms is not just splitting hairs. Parasitol Today 16: 68-71.
18. Criscione CD, Poulin R, Blouin MS, (2005) Molecular ecology of parasites: elucidating ecological and microevolutionary processes. Mol Ecol 14: 2247-2257.
19. Zarowiecki MZ, Huyse T, Littlewood DT, (2007) Making the most of mitochondrial genomes- Markers for phylogeny, molecular ecology and barcodes in Schistosoma (Platyhelminthes: Digenea). Int J Parasitol 37: 1401-1418.
20. Gasser RB, Qian BZ, Nansen P, Johansen MV, Bøgh H, (1996) Use of RAPD for the detection of genetic variation in the human blood fluke, Schistosoma japonicum, from mainland China. Mol Cell Probe 10: 353-358.
21. Sorensen E, Drew AC, Brindley PJ, Bøgh HO, Gasser RB, et al. (1998) Variation in the sequence of a mitochondrial NADH dehydrogenase I gene fragment among six natural populations of Schistosoma japonicum from China. Int J Parasitol 28: 1931-1934.
22. Bøgh HO, Zhu XQ, Qian BZ, Gasser RB, (1999) Scanning for nucleotide variations in mitochondrial DNA fragments of Schistosoma japonicum by single-strand conformation polymorphism. Parasitology 118: 73-82.
23. Zhao GH, Mo XH, Zou FC, Li J, Weng YB, et al. (2009) Genetic variability among Schistosoma japonicum isolates from different endemic regions in China revealed by sequences of three mitochondrial DNA genes. Vet Parasitol 162: 67-74.
24. Sambrook J, Fritsch EF, Maniatis T, (2001) Molecular cloning: A laboratory manual Cold Spring Harbor Cold Spring Harbor Laboratory Press.
25. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
26. Galtier N, Gouy M, Gautier C, (1996) SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 12: 543-548.
27. Rozas J, Sánchez-DelBarrio JC, Messeguer X, Rozas R, (2003) DNAsp, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496-2497.
28. Excoffier L, Laval G, Schneider S, (2005) Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evol Bioinform Online 1: 47-50.
29. Tajima F, (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
30. Fu YX, (1997) Statistical test of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147: 915-925.
31. Huelsenbeck JP, Ronquist F, (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
32. Posada D, Crandall KA, (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818.
33. Clement M, Posada D, Crandall KA, (2000) TCS: a computer program to estimate gene genealogies. Mol Ecol 9: 1657-1659.
34. Yang Z, Bielawski JP, (2000) Statistical methods for detecting molecular adaptation. Trends Ecol Evol 15: 496-503.
35. Boore JL, Macey JR, Medina M, (2005) Sequencing and comparing whole mitochondrial genomes of animals. Methods Enzymol 395: 311-348.
36. Hardman M, Hardman LM, (2006) Comparison of the phylogenetic performance of neodermatan mitochondrial protein-coding genes. Zool Scr 35: 655-665.
37. Wright S, (1978) Evolution and genetics of population. Variability within and among natural populations. Vol. 4 Chicago Univ. of Chicago Press.
38. Dong XQ, Feng XG, Dong Y, Xiong MT, Jiang H, et al. (2008) Epidemiological characteristics and control strategies of schistosomiasis in mountainous areas of Yunnan Province. Chi J Schisto Control 20: 135-137 (In Chinese).
39. Li B, (1987) On the boundaries of the Hengduan mountains. J Mt Sci 5: 74-82 (In Chinese).
40. Rudge JW, Lu DB, Fang GR, Wang TP, Basáñez MG, et al. (2009) Parasite genetic differentiation by habitat type and host species: molecular epidemiology of Schistosoma japonicum in hilly and marshland areas of Anhui Province, China. Mol Ecol 18: 2134-2147.
41. Jiang JM, He YP, Fei SM, Huang LL, Chen XM, et al. (2006) Relationships between the quantity of Oncomelania and environmental factors of vegetation and soil in hilly and mountainous areas. Wetl Sci Manag 2: 33-39 (In Chinese).
42. Xu Y, Zhang S, (2011) The influence of environmental factors on snail growth and distribution. Int J Med Parasit Dis 38: 218-222 (In Chinese).
43. Davis GM, Zhang Y, Xu XJ, Yang XX, (1999) Allozyme analyses test the taxonomic relevance of ribbing in Chinese Oncomelania (Gastropoda: Rissoacea: Pomatiopsidae). Malacologia 41: 297-317.
44. Zhao QP, Zhang SH, Deng ZR, Jiang MS, Nie P, (2010) Conservation and variation in mitochondrial genomes of gastropods Oncomelania hupensis and Tricula hortensis, intermediate host snails of Schistosoma in China. Mol Phylogenet Evol 57: 215-226.
45. Lockyer AE, Olson PD, Østergaard P, Rollinson D, Johnston DA, et al. (2003) The phylogeny of the Schistosomatidae based on three genes with emphasis on the interrelationships of Schistosoma Weinland, 1858. Parasitology 126: 203-224.
46. Davis GM, Wilke T, Zhang Y, Xu XJ, Qui CP, et al. (1999) Snail-Schistosoma, Paragonimus interaction in China: population ecology, genetic diversity, coevolution and emerging disease. Malacologia 41: 355-377.
47. Wang TP, Shrivastava J, Johansen MV, Zhang SQ, Wang FF, et al. (2006) Does multiple hosts mean multiple parasites? Population genetic structure of Schistosoma japonicum between definitive host species. Int J Parasitol 36: 1317-1325.
48. Cao C, Guo J, (2010) Schistosome infection and control of migrant population. Chin J Schisto Control 22: 388-390 (In Chinese).