-
1
-
-
84857077245
-
Clonally identical Burkholderia cepacia complex (Bcc) sequence type strain ST32 isolated from cystic fibrosis (CF) patients in French western Brittany compared to epidemiology of Bcc strains in France using multilocus sequence typing (MLST)
-
Abalain, M. L., Héry-Arnaud, G., Gouriou, S., Lintanf, J., Barrere, V., Segonds, C., Chabanon, G., Rault, G., Barbier, G. & Payan, C. (2009). Clonally identical Burkholderia cepacia complex (Bcc) sequence type strain ST32 isolated from cystic fibrosis (CF) patients in French western Brittany compared to epidemiology of Bcc strains in France using multilocus sequence typing (MLST). J Cyst Fibros 8, S34.
-
(2009)
J Cyst Fibros
, vol.8
-
-
Abalain, M.L.1
Héry-Arnaud, G.2
Gouriou, S.3
Lintanf, J.4
Barrere, V.5
Segonds, C.6
Chabanon, G.7
Rault, G.8
Barbier, G.9
Payan, C.10
-
2
-
-
0031127163
-
Molecular cloning, characterization, and mutagenesis of a pel gene from Pseudomonas syringae pv.lachrymans encoding a member of the Erwinia chrysanthemi pelADE family of pectate lyases
-
Bauer, D. W. & Collmer, A. (1997). Molecular cloning, characterization, and mutagenesis of a pel gene from Pseudomonas syringae pv. lachrymans encoding a member of the Erwinia chrysanthemi pelADE family of pectate lyases. Mol Plant Microbe Interact 10, 369-379.
-
(1997)
Mol Plant Microbe Interact
, vol.10
, pp. 369-379
-
-
Bauer, D.W.1
Collmer, A.2
-
3
-
-
84873799110
-
Studies on lysogenesis.I.The mode of phage liberation by lysogenic Escherichia coli
-
Bertani, G. (1951). Studies on lysogenesis.I.The mode of phage liberation by lysogenic Escherichia coli. J Bacteriol 62, 293-300.
-
(1951)
J Bacteriol
, vol.62
, pp. 293-300
-
-
Bertani, G.1
-
4
-
-
24044433279
-
ACT: The Artemis Comparison Tool
-
Carver, T. J., Rutherford, K. M., Berriman, M., Rajandream, M. A., Barrell, B. G. & Parkhill, J. (2005). ACT: the Artemis Comparison Tool. Bioinformatics 21, 3422-3423.
-
(2005)
Bioinformatics
, vol.21
, pp. 3422-3423
-
-
Carver, T.J.1
Rutherford, K.M.2
Berriman, M.3
Rajandream, M.A.4
Barrell, B.G.5
Parkhill, J.6
-
5
-
-
0037256292
-
Population structure analysis of Burkholderia cepacia genomovar III: Varying degrees of genetic recombination characterize major clonal complexes
-
Coenye, T. & LiPuma, J. J. (2003). Population structure analysis of Burkholderia cepacia genomovar III: varying degrees of genetic recombination characterize major clonal complexes. Microbiology 149, 77-88.
-
(2003)
Microbiology
, vol.149
, pp. 77-88
-
-
Coenye, T.1
Lipuma, J.J.2
-
6
-
-
8544278913
-
Recovery of Burkholderia cenocepacia strain PHDC from cystic fibrosis patients in Europe
-
Coenye, T., Spilker, T., Van Schoor, A., LiPuma, J. J. & Vandamme, P. (2004). Recovery of Burkholderia cenocepacia strain PHDC from cystic fibrosis patients in Europe. Thorax 59, 952-954.
-
(2004)
Thorax
, vol.59
, pp. 952-954
-
-
Coenye, T.1
Spilker, T.2
van Schoor, A.3
Lipuma, J.J.4
Vandamme, P.5
-
7
-
-
0001491263
-
Characterization of a spontaneous thiostrepton-resistant Frankia alni infective isolate using PCR-RFLP of nif and glnII genes
-
Cournoyer, B. & Normand, P. (1994). Characterization of a spontaneous thiostrepton-resistant Frankia alni infective isolate using PCR-RFLP of nif and glnII genes. Soil Biol Biochem 26, 553-559.
-
(1994)
Soil Biol Biochem
, vol.26
, pp. 553-559
-
-
Cournoyer, B.1
Normand, P.2
-
8
-
-
77954636950
-
Burkholderia cenocepacia in cystic fibrosis: Epidemiology and molecular mechanisms of virulence
-
Drevinek, P. & Mahenthiralingam, E. (2010). Burkholderia cenocepacia in cystic fibrosis: epidemiology and molecular mechanisms of virulence. Clin Microbiol Infect 16, 821-830.
-
(2010)
Clin Microbiol Infect
, vol.16
, pp. 821-830
-
-
Drevinek, P.1
Mahenthiralingam, E.2
-
9
-
-
73949128999
-
Oxidative stress of Burkholderia cenocepacia induces insertion sequence-mediated genomic rearrangements that interfere with macrorestriction-based genotyping
-
Drevinek, P., Baldwin, A., Lindenburg, L., Joshi, L. T., Marchbank, A., Vosahlikova, S., Dowson, C. G. & Mahenthiralingam, E. (2010). Oxidative stress of Burkholderia cenocepacia induces insertion sequence-mediated genomic rearrangements that interfere with macrorestriction-based genotyping. J Clin Microbiol 48, 34-40.
-
(2010)
J Clin Microbiol
, vol.48
, pp. 34-40
-
-
Drevinek, P.1
Baldwin, A.2
Lindenburg, L.3
Joshi, L.T.4
Marchbank, A.5
Vosahlikova, S.6
Dowson, C.G.7
Mahenthiralingam, E.8
-
10
-
-
64749095033
-
Bacterial multidrug transport through the lens of the major facilitator superfamily
-
Fluman, N. & Bibi, E. (2009). Bacterial multidrug transport through the lens of the major facilitator superfamily. Biochim Biophys Acta 1794, 738-747.
-
(2009)
Biochim Biophys Acta
, vol.1794
, pp. 738-747
-
-
Fluman, N.1
Bibi, E.2
-
11
-
-
0038628890
-
Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei
-
Godoy, D., Randle, G., Simpson, A. J., Aanensen, D. M., Pitt, T. L., Kinoshita, R. & Spratt, B. G. (2003). Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei. J Clin Microbiol 41, 2068-2079.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 2068-2079
-
-
Godoy, D.1
Randle, G.2
Simpson, A.J.3
Aanensen, D.M.4
Pitt, T.L.5
Kinoshita, R.6
Spratt, B.G.7
-
12
-
-
71249123561
-
Epidemiology and molecular characterization of a clone of Burkholderia cenocepacia responsible for nosocomial pulmonary tract infections in a French intensive care unit
-
Graindorge, A., Menard, A., Neto, M., Bouvet, C., Miollan, R., Gaillard, S., de Montclos, H., Laurent, F. & Cournoyer, B. (2010). Epidemiology and molecular characterization of a clone of Burkholderia cenocepacia responsible for nosocomial pulmonary tract infections in a French intensive care unit. Diagn Microbiol Infect Dis 66, 29-40.
-
(2010)
Diagn Microbiol Infect Dis
, vol.66
, pp. 29-40
-
-
Graindorge, A.1
Menard, A.2
Neto, M.3
Bouvet, C.4
Miollan, R.5
Gaillard, S.6
de Montclos, H.7
Laurent, F.8
Cournoyer, B.9
-
13
-
-
58149507650
-
The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients
-
Holden, M. T., Seth-Smith, H. M., Crossman, L. C., Sebaihia, M., Bentley, S. D., Cerdeño-Tárraga, A. M., Thomson, N. R., Bason, N., Quail, M. A. & other authors (2009). The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients. J Bacteriol 191, 261-277.
-
(2009)
J Bacteriol
, vol.191
, pp. 261-277
-
-
Holden, M.T.1
Seth-Smith, H.M.2
Crossman, L.C.3
Sebaihia, M.4
Bentley, S.D.5
Cerdeño-Tárraga, A.M.6
Thomson, N.R.7
Bason, N.8
Quail, M.A.9
-
14
-
-
0021340634
-
Pseudomonas cepacia infection in cystic fibrosis: An emerging problem
-
Isles, A., Maclusky, I., Corey, M., Gold, R., Prober, C., Fleming, P. & Levison, H. (1984). Pseudomonas cepacia infection in cystic fibrosis: an emerging problem. J Pediatr 104, 206-210.
-
(1984)
J Pediatr
, vol.104
, pp. 206-210
-
-
Isles, A.1
Maclusky, I.2
Corey, M.3
Gold, R.4
Prober, C.5
Fleming, P.6
Levison, H.7
-
15
-
-
77956398098
-
The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments
-
Janssen, P. J., Van Houdt, R., Moors, H., Monsieurs, P., Morin, N., Michaux, A., Benotmane, M. A., Leys, N., Vallaeys, T. & other authors (2010). The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments. PLoS ONE 5, e10433.
-
(2010)
PLoS ONE
, vol.e10433
, pp. 5
-
-
Janssen, P.J.1
van Houdt, R.2
Moors, H.3
Monsieurs, P.4
Morin, N.5
Michaux, A.6
Benotmane, M.A.7
Leys, N.8
Vallaeys, T.9
-
16
-
-
0028288879
-
Linkage analysis of geographic and clinical clusters in Pseudomonas cepacia infections by multilocus enzyme electrophoresis and ribotyping
-
Johnson, W. M., Tyler, S. D. & Rozee, K. R. (1994). Linkage analysis of geographic and clinical clusters in Pseudomonas cepacia infections by multilocus enzyme electrophoresis and ribotyping. J Clin Microbiol 32, 924-930.
-
(1994)
J Clin Microbiol
, vol.32
, pp. 924-930
-
-
Johnson, W.M.1
Tyler, S.D.2
Rozee, K.R.3
-
17
-
-
29744462337
-
Distribution and genomic location of active insertion sequences in the Burkholderia cepacia complex
-
Kenna, D. T., Yesilkaya, H., Forbes, K. J., Barcus, V. A., Vandamme, P. & Govan, J. R. (2006). Distribution and genomic location of active insertion sequences in the Burkholderia cepacia complex. J Med Microbiol 55, 1-10.
-
(2006)
J Med Microbiol
, vol.55
, pp. 1-10
-
-
Kenna, D.T.1
Yesilkaya, H.2
Forbes, K.J.3
Barcus, V.A.4
Vandamme, P.5
Govan, J.R.6
-
18
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
-
(2004)
Brief Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
19
-
-
0023701669
-
Ribotype analysis of Pseudomonas cepacia from cystic fibrosis treatment centers
-
LiPuma, J. J., Mortensen, J. E., Dasen, S. E., Edlind, T. D., Schidlow, D. V., Burns, J. L. & Stull, T. L. (1988). Ribotype analysis of Pseudomonas cepacia from cystic fibrosis treatment centers. J Pediatr 113, 859-862.
-
(1988)
J Pediatr
, vol.113
, pp. 859-862
-
-
Lipuma, J.J.1
Mortensen, J.E.2
Dasen, S.E.3
Edlind, T.D.4
Schidlow, D.V.5
Burns, J.L.6
Stull, T.L.7
-
20
-
-
0037505547
-
Identification by subtractive hybridization of a novel insertion element specific for two widespread Burkholderia cepacia genomovar III strains
-
Liu, L., Spilker, T., Coenye, T. & LiPuma, J. J. (2003). Identification by subtractive hybridization of a novel insertion element specific for two widespread Burkholderia cepacia genomovar III strains. J Clin Microbiol 41, 2471-2476.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 2471-2476
-
-
Liu, L.1
Spilker, T.2
Coenye, T.3
Lipuma, J.J.4
-
21
-
-
0033827722
-
DNA-based diagnostic approaches for identification of Burkholderia cepacia complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia genomovars I and III
-
Mahenthiralingam, E., Bischof, J., Byrne, S. K., Radomski, C., Davies, J. E., Av-Gay, Y. & Vandamme, P. (2000). DNA-based diagnostic approaches for identification of Burkholderia cepacia complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia genomovars I and III. J Clin Microbiol 38, 3165-3173.
-
(2000)
J Clin Microbiol
, vol.38
, pp. 3165-3173
-
-
Mahenthiralingam, E.1
Bischof, J.2
Byrne, S.K.3
Radomski, C.4
Davies, J.E.5
Av-Gay, Y.6
Vandamme, P.7
-
23
-
-
34247882810
-
Selection of nitrogen-fixing deficient Burkholderia vietna-miensis strains by cystic fibrosis patients: Involvement of nif gene deletions and auxotrophic mutations
-
Menard, A., Monnez, C., de Los Santos, P.E., Segonds, C., Caballero-Mellado, J., Lipuma, J. J., Chabanon, G. & Cournoyer, B. (2007). Selection of nitrogen-fixing deficient Burkholderia vietna-miensis strains by cystic fibrosis patients: involvement of nif gene deletions and auxotrophic mutations. Environ Microbiol 9, 1176-1185.
-
(2007)
Environ Microbiol
, vol.9
, pp. 1176-1185
-
-
Menard, A.1
Monnez, C.2
de los Santos, P.E.3
Segonds, C.4
Caballero-Mellado, J.5
Lipuma, J.J.6
Chabanon, G.7
Cournoyer, B.8
-
24
-
-
0035544406
-
Detection and activity of insertion sequences in environmental strains of Burkholderia
-
Miché, L., Faure, D., Blot, M., Cabanne-Giuli, E. & Balandreau, J. (2001). Detection and activity of insertion sequences in environmental strains of Burkholderia. Environ Microbiol 3, 766-773.
-
(2001)
Environ Microbiol
, vol.3
, pp. 766-773
-
-
Miché, L.1
Faure, D.2
Blot, M.3
Cabanne-Giuli, E.4
Balandreau, J.5
-
25
-
-
79954415222
-
Insertion sequence elements in Cupriavidus metallidurans CH34: Distribution and role in adaptation
-
Mijnendonckx, K., Provoost, A., Monsieurs, P., Leys, N., Mergeay, M., Mahillon, J. & Van Houdt, R. (2011). Insertion sequence elements in Cupriavidus metallidurans CH34: distribution and role in adaptation. Plasmid 65, 193-203.
-
(2011)
Plasmid
, vol.65
, pp. 193-203
-
-
Mijnendonckx, K.1
Provoost, A.2
Monsieurs, P.3
Leys, N.4
Mergeay, M.5
Mahillon, J.6
van Houdt, R.7
-
26
-
-
4644311317
-
Structural flexibility in the Burkholderia mallei genome
-
Nierman, W. C., DeShazer, D., Kim, H. S., Tettelin, H., Nelson, K. E., Feldblyum, T., Ulrich, R. L., Ronning, C. M., Brinkac, L. M. & other authors (2004). Structural flexibility in the Burkholderia mallei genome. Proc Natl Acad Sci U S A 101, 14246-14251.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 14246-14251
-
-
Nierman, W.C.1
Deshazer, D.2
Kim, H.S.3
Tettelin, H.4
Nelson, K.E.5
Feldblyum, T.6
Ulrich, R.L.7
Ronning, C.M.8
Brinkac, L.M.9
-
27
-
-
0037333188
-
Suppression-subtractive hybridisation reveals variations in gene distribution amongst the Burkholderia cepacia complex, including the presence in some strains of a genomic island containing putative polysaccharide production genes
-
Parsons, Y. N., Banasko, R., Detsika, M. G., Duangsonk, K., Rainbow, L., Hart, C. A. & Winstanley, C. (2003). Suppression-subtractive hybridisation reveals variations in gene distribution amongst the Burkholderia cepacia complex, including the presence in some strains of a genomic island containing putative polysaccharide production genes. Arch Microbiol 179, 214-223.
-
(2003)
Arch Microbiol
, vol.179
, pp. 214-223
-
-
Parsons, Y.N.1
Banasko, R.2
Detsika, M.G.3
Duangsonk, K.4
Rainbow, L.5
Hart, C.A.6
Winstanley, C.7
-
28
-
-
0024553747
-
Rapid extraction of bacterial genomic DNA with guanidium thiocyanate
-
Pitcher, D. G., Saunders, N. A. & Owen, R. J. (1989). Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Lett Appl Microbiol 8, 151-156.
-
(1989)
Lett Appl Microbiol
, vol.8
, pp. 151-156
-
-
Pitcher, D.G.1
Saunders, N.A.2
Owen, R.J.3
-
29
-
-
1642556721
-
Infection control in cystic fibrosis
-
Saiman, L. & Siegel, J. (2004). Infection control in cystic fibrosis. Clin Microbiol Rev 17, 57-71.
-
(2004)
Clin Microbiol Rev
, vol.17
, pp. 57-71
-
-
Saiman, L.1
Siegel, J.2
-
30
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406- 425.
-
(1987)
Mol Biol Evol 4, 406-
, pp. 425
-
-
Saitou, N.1
Nei, M.2
-
32
-
-
77954054691
-
The early stage of bacterial genome-reductive evolution in the host
-
Song, H., Hwang, J., Yi, H., Ulrich, R. L., Yu, Y., Nierman, W. C. & Kim, H. S. (2010). The early stage of bacterial genome-reductive evolution in the host. PLoS Pathog 6, e1000922.
-
(2010)
PLoS Pathog
, vol.6
-
-
Song, H.1
Hwang, J.2
Yi, H.3
Ulrich, R.L.4
Yu, Y.5
Nierman, W.C.6
Kim, H.S.7
-
33
-
-
0029904372
-
Identification of IS1356, a new insertion sequence, and its association with IS402 in epidemic strains of Burkholderia cepacia infecting cystic fibrosis patients
-
Tyler, S. D., Rozee, K. R. & Johnson, W. M. (1996). Identification of IS1356, a new insertion sequence, and its association with IS402 in epidemic strains of Burkholderia cepacia infecting cystic fibrosis patients. J Clin Microbiol 34, 1610-1616.
-
(1996)
J Clin Microbiol
, vol.34
, pp. 1610-1616
-
-
Tyler, S.D.1
Rozee, K.R.2
Johnson, W.M.3
-
34
-
-
60349114025
-
Taxon K, a complex within the Burkholderia cepacia complex, comprises at least two novel species, Burkholderia contaminans sp.nov.and Burkholderia lata sp.nov
-
Vanlaere, E., Baldwin, A., Gevers, D., Henry, D., De Brandt, E., LiPuma, J. J., Mahenthiralingam, E., Speert, D. P., Dowson, C. & Vandamme, P. (2009). Taxon K, a complex within the Burkholderia cepacia complex, comprises at least two novel species, Burkholderia contaminans sp. nov. and Burkholderia lata sp. nov. Int J Syst Evol Microbiol 59, 102-111.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 102-111
-
-
Vanlaere, E.1
Baldwin, A.2
Gevers, D.3
Henry, D.4
de Brandt, E.5
Lipuma, J.J.6
Mahenthiralingam, E.7
Speert, D.P.8
Dowson, C.9
Vandamme, P.10
-
35
-
-
78650771854
-
The various lifestyles of the Burkholderia cepacia complex species: A tribute to adaptation
-
Vial, L., Chapalain, A., Groleau, M. C. & Déziel, E. (2011). The various lifestyles of the Burkholderia cepacia complex species: a tribute to adaptation. Environ Microbiol 13, 1-12.
-
(2011)
Environ Microbiol
, vol.13
, pp. 1-12
-
-
Vial, L.1
Chapalain, A.2
Groleau, M.C.3
Déziel, E.4
-
36
-
-
33644899969
-
Periodic extinctions of transposable elements in bacterial lineages: Evidence from intragenomic variation in multiple genomes
-
Wagner, A. (2006). Periodic extinctions of transposable elements in bacterial lineages: evidence from intragenomic variation in multiple genomes. Mol Biol Evol 23, 723-733.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 723-733
-
-
Wagner, A.1
-
37
-
-
57449109520
-
Transposable elements as genomic diseases
-
Wagner, A. (2009). Transposable elements as genomic diseases. Mol Biosyst 5, 32-35.
-
(2009)
Mol Biosyst
, vol.5
, pp. 32-35
-
-
Wagner, A.1
-
38
-
-
77954761569
-
Integrative and conjugative elements: Mosaic mobile genetic elements enabling dynamic lateral gene flow
-
Wozniak, R. A. & Waldor, M. K. (2010). Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow. Nat Rev Microbiol 8, 552-563.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 552-563
-
-
Wozniak, R.A.1
Waldor, M.K.2
|