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Volumn 149, Issue 1, 2003, Pages 77-88

Population structure analysis of Burkholderia cepacia genomovar III: Varying degrees of genetic recombination characterize major clonal complexes

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN;

EID: 0037256292     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.25850-0     Document Type: Review
Times cited : (48)

References (51)
  • 1
    • 0035659459 scopus 로고    scopus 로고
    • Lung transplantation for cystic fibrosis patients with Burkholderia cepacia complex: Survival linked to genomovar type
    • Aris, R. M., Routh, J. C., LiPuma, J. J., Heath, D. G. & Gilligan, P. H. (2001). Lung transplantation for cystic fibrosis patients with Burkholderia cepacia complex: survival linked to genomovar type. Am J Resp Crit Care Med 164, 2102-2106.
    • (2001) Am. J. Resp. Crit. Care Med. , vol.164 , pp. 2102-2106
    • Aris, R.M.1    Routh, J.C.2    LiPuma, J.J.3    Heath, D.G.4    Gilligan, P.H.5
  • 3
    • 0026911267 scopus 로고
    • Split decomposition: A new and useful approach to phylogenetic analysis of distance data
    • Bandelt, H. J. & Dress, A. W. (1992). Split decomposition: a new and useful approach to phylogenetic analysis of distance data. Mol Phylogenet Evol 1, 242-252.
    • (1992) Mol. Phylogenet. Evol. , vol.1 , pp. 242-252
    • Bandelt, H.J.1    Dress, A.W.2
  • 4
    • 0028057611 scopus 로고
    • Interspecies recombination between the penA genes of Neisseria meningitidis and commensal Neisseria species during the emergence of penicillin resistance in N. meningitidis: Natural events and laboratory simulation
    • Bowler, L. D., Zhang, O. Y., Riou, J. Y. & Spratt, B. G. (1994). Interspecies recombination between the penA genes of Neisseria meningitidis and commensal Neisseria species during the emergence of penicillin resistance in N. meningitidis: natural events and laboratory simulation. J Bacteriol 176, 333-337.
    • (1994) J. Bacteriol. , vol.176 , pp. 333-337
    • Bowler, L.D.1    Zhang, O.Y.2    Riou, J.Y.3    Spratt, B.G.4
  • 5
    • 0035203841 scopus 로고    scopus 로고
    • Endemicity and inter-city spread of Burkholderia cepacia genomovar III in cystic fibrosis
    • Chen, J. S., Witzmann, K. A., Spilker, T., Fink R. J. & LiPuma, J. J. (2001). Endemicity and inter-city spread of Burkholderia cepacia genomovar III in cystic fibrosis. J Pediatr 139, 643-649.
    • (2001) J. Pediatr. , vol.139 , pp. 643-649
    • Chen, J.S.1    Witzmann, K.A.2    Spilker, T.3    Fink, R.J.4    LiPuma, J.J.5
  • 6
    • 0034103144 scopus 로고    scopus 로고
    • Distribution of genes encoding putative transmissibility factors among epidemic and nonepidemic strains of Burkholderia cepacia from cystic fibrosis patients in the United Kingdom
    • Clode, F. E., Kaufmann, M. E., MaInick, H. & Pitt, T. L. (2000). Distribution of genes encoding putative transmissibility factors among epidemic and nonepidemic strains of Burkholderia cepacia from cystic fibrosis patients in the United Kingdom. J Clin Microbiol 38, 1763-1766.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 1763-1766
    • Clode, F.E.1    Kaufmann, M.E.2    MaInick, H.3    Pitt, T.L.4
  • 7
    • 0037094093 scopus 로고    scopus 로고
    • Multilocus restriction typing, a novel tool for studying global epidemiology of Burkholderia cepacia complex infection in cystic fibrosis
    • Coenye, T. & LiPuma, J. J. (2002). Multilocus restriction typing, a novel tool for studying global epidemiology of Burkholderia cepacia complex infection in cystic fibrosis. J Infect Dis 185, 1454-1462.
    • (2002) J. Infect. Dis. , vol.185 , pp. 1454-1462
    • Coenye, T.1    LiPuma, J.J.2
  • 8
    • 0034799341 scopus 로고    scopus 로고
    • Taxonomy and identification of the Burkholderia cepacia complex
    • Coenye, T., Vandamme, P., Govan, J. R. W. & LiPuma, J. J. (2001). Taxonomy and identification of the Burkholderia cepacia complex. J Clin Microbiol 39, 3427-3436.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 3427-3436
    • Coenye, T.1    Vandamme, P.2    Govan, J.R.W.3    LiPuma, J.J.4
  • 10
    • 0035944832 scopus 로고    scopus 로고
    • Burkholderia cepacia complex genomovars and pulmonary transplantation outcomes in patients with cystic fibrosis
    • DeSoyza, A., McDowell, A., Archer, L., Dark J. H., Elborn, S. J., Mahenthiralingam, E., Gould, K. & Cords, P. A. (2001). Burkholderia cepacia complex genomovars and pulmonary transplantation outcomes in patients with cystic fibrosis. Lancet 358, 1780-1781.
    • (2001) Lancet , vol.358 , pp. 1780-1781
    • DeSoyza, A.1    McDowell, A.2    Archer, L.3    Dark, J.H.4    Elborn, S.J.5    Mahenthiralingam, E.6    Gould, K.7    Cords, P.A.8
  • 11
    • 0027453558 scopus 로고
    • Split decomposition: A technique to analyze viral evolution
    • Dopazo, J., Dress, A. & von Haeseler, A. (1993). Split decomposition: a technique to analyze viral evolution. Proc Natl Acad Sci U S A 90, 10320-10324.
    • (1993) Proc. Natl. Acad. Sci. U S A , vol.90 , pp. 10320-10324
    • Dopazo, J.1    Dress, A.2    von Haeseler, A.3
  • 12
    • 0025313681 scopus 로고
    • Penicillin-resistant viridans streptococci have obtained altered penicillin-binding protein genes from penicillin-resistant strains of Streptococcus pneumoniae
    • Dowson, C. G., Hutchison, A., Woodford, N., Johnson, A. P., George, R. C. & Spratt, B. G. (1990). Penicillin-resistant viridans streptococci have obtained altered penicillin-binding protein genes from penicillin-resistant strains of Streptococcus pneumoniae. Proc Natl Acad Sci U S A 87, 5858-5862.
    • (1990) Proc. Natl. Acad. Sci. U S A , vol.87 , pp. 5858-5862
    • Dowson, C.G.1    Hutchison, A.2    Woodford, N.3    Johnson, A.P.4    George, R.C.5    Spratt, B.G.6
  • 13
    • 0034769889 scopus 로고    scopus 로고
    • Recombination and the population structures of bacterial pathogens
    • Feil, E. J. & Spratt, B. G. (2001). Recombination and the population structures of bacterial pathogens. Annu Rev Microbiol 55, 561-590.
    • (2001) Annu. Rev. Microbiol. , vol.55 , pp. 561-590
    • Feil, E.J.1    Spratt, B.G.2
  • 15
    • 0029814366 scopus 로고    scopus 로고
    • Microbial pathogenesis in cystic fibrosis: Mucoid Pseudomonas aeruginosa and Burkholderia cepacia
    • Govan, J. R. W. & Deretic, V. (1996). Microbial pathogenesis in cystic fibrosis: mucoid Pseudomonas aeruginosa and Burkholderia cepacia. Microbiol Rev 60, 539-574.
    • (1996) Microbiol. Rev. , vol.60 , pp. 539-574
    • Govan, J.R.W.1    Deretic, V.2
  • 16
    • 0000037022 scopus 로고    scopus 로고
    • Burkholderia cepacia - Friend and foe
    • Govan, J. R. W., Balandreau, J. & Vandamme, P. (2000). Burkholderia cepacia - friend and foe. ASM News 66, 124-125.
    • (2000) ASM News , vol.66 , pp. 124-125
    • Govan, J.R.W.1    Balandreau, J.2    Vandamme, P.3
  • 17
    • 0033664744 scopus 로고    scopus 로고
    • LIAN 3.0: Detecting linkage disequilibrium in multilocus data
    • Haubold, B. & Hudson, R. R. (2000). LIAN 3.0: detecting linkage disequilibrium in multilocus data. Bioinformatics 16, 847-848.
    • (2000) Bioinformatics , vol.16 , pp. 847-848
    • Haubold, B.1    Hudson, R.R.2
  • 18
    • 0031788831 scopus 로고    scopus 로고
    • Detecting linkage disequilibrium in bacterial populations
    • Haubold, B., Travisano, M., Rainey, P. B. & Hudson, R. R. (1998). Detecting linkage disequilibrium in bacterial populations. Genetics 150, 1341-1348.
    • (1998) Genetics , vol.150 , pp. 1341-1348
    • Haubold, B.1    Travisano, M.2    Rainey, P.B.3    Hudson, R.R.4
  • 19
    • 0035098325 scopus 로고    scopus 로고
    • Biochemical and molecular methods for determining genomovar status of the Burkholderia cepacia complex
    • Henry, D. A., Mahenthiralingham, E., Vandamme, P., Coenye, T. & Speert, D. P. (2001). Biochemical and molecular methods for determining genomovar status of the Burkholderia cepacia complex. J Clin Microbiol 39, 1073-1078.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 1073-1078
    • Henry, D.A.1    Mahenthiralingham, E.2    Vandamme, P.3    Coenye, T.4    Speert, D.P.5
  • 20
    • 0031807326 scopus 로고    scopus 로고
    • Agricultural use of Burkholderia (Pseudomonas) cepacia: A threat to human health?
    • Holmes, A., Govan, J. & Goldstein, R. (1998). Agricultural use of Burkholderia (Pseudomonas) cepacia: a threat to human health? Emerg Infect Dis 4, 221-227.
    • (1998) Emerg. Infect. Dis. , vol.4 , pp. 221-227
    • Holmes, A.1    Govan, J.2    Goldstein, R.3
  • 21
    • 0031678692 scopus 로고    scopus 로고
    • SplitsTree: Analyzing and visualizing evolutionary data
    • Huson, D. H. (1998). SplitsTree: analyzing and visualizing evolutionary data. Bioinformatics 14, 68-73.
    • (1998) Bioinformatics , vol.14 , pp. 68-73
    • Huson, D.H.1
  • 23
    • 0028288879 scopus 로고
    • Linkage analysis of geographic and clinical clusters in Pseudomonas cepacia infections by multilocus enzyme electrophoresis and ribotyping
    • Johnson, W. M., Tyler, S. D. & Rozee, K. R. (1994). Linkage analysis of geographic and clinical clusters in Pseudomonas cepacia infections by multilocus enzyme electrophoresis and ribotyping. J Clin Microbiol 32, 924-930.
    • (1994) J. Clin. Microbiol. , vol.32 , pp. 924-930
    • Johnson, W.M.1    Tyler, S.D.2    Rozee, K.R.3
  • 24
    • 0035163428 scopus 로고    scopus 로고
    • Clinical aspects of chronic granulomatuous disease
    • Johnston, R. B. (2001). Clinical aspects of chronic granulomatuous disease. Curr Opin Hematol 8, 17-22.
    • (2001) Curr. Opin. Hematol. , vol.8 , pp. 17-22
    • Johnston, R.B.1
  • 25
    • 0036137328 scopus 로고    scopus 로고
    • Sequence type analysis and recombinational tests (START)
    • Jolley, K., Fail, E. J., Chan, M. S. & Maiden, M. C. J. (2001). Sequence type analysis and recombinational tests (START). Bioinformatics 17, 1230-1231.
    • (2001) Bioinformatics , vol.17 , pp. 1230-1231
    • Jolley, K.1    Fail, E.J.2    Chan, M.S.3    Maiden, M.C.J.4
  • 27
    • 0030031267 scopus 로고    scopus 로고
    • Gene transfer is a major factor in bacterial evolution
    • Lan, R. & Reeves, P. R. (1996). Gene transfer is a major factor in bacterial evolution. Mol Biol Evol 13, 47-55.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 47-55
    • Lan, R.1    Reeves, P.R.2
  • 28
    • 0036159537 scopus 로고    scopus 로고
    • Outcome of Burkholderia cepacia colonisation in an adult cystic fibrosis centre
    • Ledson, M. J., Gallagher, M. J., Jackson, M., Hart, C. A. & Walshaw, M. J. (2002). Outcome of Burkholderia cepacia colonisation in an adult cystic fibrosis centre. Thorax 57, 142-145.
    • (2002) Thorax , vol.57 , pp. 142-145
    • Ledson, M.J.1    Gallagher, M.J.2    Jackson, M.3    Hart, C.A.4    Walshaw, M.J.5
  • 30
    • 0031660253 scopus 로고    scopus 로고
    • Burkholderia cepacia: Management issues and new insight
    • LiPuma, J. J. (1998). Burkholderia cepacia: management issues and new insight. Clin Chest Med 19, 473-486.
    • (1998) Clin. Chest Med. , vol.19 , pp. 473-486
    • LiPuma, J.J.1
  • 32
    • 0035402363 scopus 로고    scopus 로고
    • Disproportionate distribution of Burkholderia cepacia complex species and transmissibility markers in cystic fibrosis
    • LiPuma, J. J, Spilker, T., Gill, L. H., Campbell, P. W., Liu, L. & Mahenthiralingam, E. (2001). Disproportionate distribution of Burkholderia cepacia complex species and transmissibility markers in cystic fibrosis. Am J Resp Crit Care Med 164, 92-96.
    • (2001) Am. J. Resp. Crit. Care Med. , vol.164 , pp. 92-96
    • LiPuma, J.J.1    Spilker, T.2    Gill, L.H.3    Campbell, P.W.4    Liu, L.5    Mahenthiralingam, E.6
  • 33
    • 0037042475 scopus 로고    scopus 로고
    • An epidemic Burkholderia cepacia complex strain identified in soil
    • LiPuma, J. J., Spilker, T., Coenye, T. & Gonzalez, C. F. (2002). An epidemic Burkholderia cepacia complex strain identified in soil. Lancet 359, 2002-2003.
    • (2002) Lancet , vol.359 , pp. 2002-2003
    • LiPuma, J.J.1    Spilker, T.2    Coenye, T.3    Gonzalez, C.F.4
  • 34
    • 0030956327 scopus 로고    scopus 로고
    • Identification and characterization of a novel DNA marker associated with epidemic Burkholderia cepacia strains recovered from patients with cystic fibrosis
    • Mahenthiralingam, E., Simpson, D. A. & Speert, D. P. (1997). Identification and characterization of a novel DNA marker associated with epidemic Burkholderia cepacia strains recovered from patients with cystic fibrosis. J Clin Microbiol 35, 808-816.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 808-816
    • Mahenthiralingam, E.1    Simpson, D.A.2    Speert, D.P.3
  • 35
    • 0033827722 scopus 로고    scopus 로고
    • DNA-based diagnostic approaches for the identification of Burkholderia cepacia complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis and Burkholderia cepacia genomovars I and III
    • Mahenthiralingam, E., Bischof, J., Byrne, S. K., Radomski, C., Davies, J. E., Av-Gay, Y. & Vandamme, P. (2000). DNA-based diagnostic approaches for the identification of Burkholderia cepacia complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis and Burkholderia cepacia genomovars I and III. J Clin Microbiol 38, 3165-3173.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 3165-3173
    • Mahenthiralingam, E.1    Bischof, J.2    Byrne, S.K.3    Radomski, C.4    Davies, J.E.5    Av-Gay, Y.6    Vandamme, P.7
  • 36
    • 13144252236 scopus 로고    scopus 로고
    • Multilocus sequence typing: A portable approach to the identification of clones within populations of pathogenic microorganisms
    • & 10 other authors
    • Maiden, M. C. J., Bygraves, J. A., Feil, E. & 10 other authors (1998). Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc Natl Acad Sci U S A 95, 3140-3145.
    • (1998) Proc. Natl. Acad. Sci. U S A , vol.95 , pp. 3140-3145
    • Maiden, M.C.J.1    Bygraves, J.A.2    Feil, E.3
  • 38
    • 0001534985 scopus 로고
    • Genetic diversity in natural populations of a soil bacterium across a landscape gradient
    • McArthur, J. V., Kovavic, D. A. & Smith, M. H. (1988). Genetic diversity in natural populations of a soil bacterium across a landscape gradient. Proc Natl Acad Sci U S A 85, 9621-9624.
    • (1988) Proc. Natl. Acad. Sci. U S A , vol.85 , pp. 9621-9624
    • McArthur, J.V.1    Kovavic, D.A.2    Smith, M.H.3
  • 39
    • 0029682343 scopus 로고    scopus 로고
    • Molecular population genetic analysis of emerged bacterial pathogens: Selected insights
    • Musser, J. M. (1996). Molecular population genetic analysis of emerged bacterial pathogens: selected insights. Emerg Infect Dis 2, 1-17.
    • (1996) Emerg. Infect. Dis. , vol.2 , pp. 1-17
    • Musser, J.M.1
  • 40
    • 0034048510 scopus 로고    scopus 로고
    • Sensitivity of the Burkholderia cepacia complex and Pseudomonas aeruginosa to transducing bacteriophages
    • Nzula, S., Vandamme, P. & Govan, J. R. W. (2000). Sensitivity of the Burkholderia cepacia complex and Pseudomonas aeruginosa to transducing bacteriophages. FEMS Immunol Med Microbiol 28, 307-312.
    • (2000) FEMS Immunol. Med. Microbiol. , vol.28 , pp. 307-312
    • Nzula, S.1    Vandamme, P.2    Govan, J.R.W.3
  • 41
    • 0034794149 scopus 로고    scopus 로고
    • Diversity of Burkholderia cepacia complex and implications for risk assessment of biological control strains
    • Parke, J. L. & Gurian-Sherman, D. (2001). Diversity of Burkholderia cepacia complex and implications for risk assessment of biological control strains. Annu Rev Phytopathol 39, 225-258.
    • (2001) Annu. Rev. Phytopathol. , vol.39 , pp. 225-258
    • Parke, J.L.1    Gurian-Sherman, D.2
  • 42
    • 0035282311 scopus 로고    scopus 로고
    • Incidence of the cblA major subunit pilin gene amongst Burkholderia species
    • Richardson, J., Stead, D. E. & Coutts, R. H. A. (2001). Incidence of the cblA major subunit pilin gene amongst Burkholderia species. FEMS Microbiol Lett 196, 61-66.
    • (2001) FEMS Microbiol. Lett. , vol.196 , pp. 61-66
    • Richardson, J.1    Stead, D.E.2    Coutts, R.H.A.3
  • 43
    • 0028000143 scopus 로고
    • Infection with Pseudomonas cepacia in chronic granulomatous disease: Role of nonoxidative killing by neutrophils in host defense
    • Speert D. P., Bond, M., Woodmann, R. C. & Curnutte, J. T. (1994). Infection with Pseudomonas cepacia in chronic granulomatous disease: role of nonoxidative killing by neutrophils in host defense. J Infect Dis 170, 1524-1531.
    • (1994) J. Infect. Dis. , vol.170 , pp. 1524-1531
    • Speert, D.P.1    Bond, M.2    Woodmann, R.C.3    Curnutte, J.T.4
  • 44
    • 0036193728 scopus 로고    scopus 로고
    • Epidemiology of Burkholderia cepacia complex in patients with cystic fibrosis, Canada
    • Speert, D. P., Henry, D., Vandamme, P., Corey, M. & Mahenthiralingam, E. (2002). Epidemiology of Burkholderia cepacia complex in patients with cystic fibrosis, Canada. Emerg Infect Dis 8, 181-187.
    • (2002) Emerg. Infect. Dis. , vol.8 , pp. 181-187
    • Speert, D.P.1    Henry, D.2    Vandamme, P.3    Corey, M.4    Mahenthiralingam, E.5
  • 46
    • 0029075157 scopus 로고
    • The emergence of a highly transmissable lineage of cbl+ Pseudomonas (Burkholderia) cepacia causing CF centre epidemics in North America and Britain
    • & 7 other authors
    • Sun, L., Jiang, R. Z., Steinbach, S. & 7 other authors. (1995). The emergence of a highly transmissable lineage of cbl+ Pseudomonas (Burkholderia) cepacia causing CF centre epidemics in North America and Britain. Nat Med 1, 661-666.
    • (1995) Nat. Med. , vol.1 , pp. 661-666
    • Sun, L.1    Jiang, R.Z.2    Steinbach, S.3
  • 47
    • 0029904372 scopus 로고    scopus 로고
    • Identification of IS1356, a new insertion sequence, and its association with IS402 in epidemic strains of Burkholderia cepacia infecting cystic fibrosis patients
    • Tyler, S. D., Rozee, K. R. & Johnson, W. M. (1996). Identification of IS1356, a new insertion sequence, and its association with IS402 in epidemic strains of Burkholderia cepacia infecting cystic fibrosis patients. J Clin Microbiol 34, 1610-1616.
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 1610-1616
    • Tyler, S.D.1    Rozee, K.R.2    Johnson, W.M.3
  • 48
    • 0030827928 scopus 로고    scopus 로고
    • Occurrence of multiple genomovars of Burkholderia cepacia in cystic fibrosis patients and proposal of Burkholderia multivorans sp. nov
    • & 8 other authors
    • Vandamme, P., Holmes, B., Vancanneyt, M. & 8 other authors (1997). Occurrence of multiple genomovars of Burkholderia cepacia in cystic fibrosis patients and proposal of Burkholderia multivorans sp. nov. Int J Syst Bacteriol 47, 1188-1200.
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 1188-1200
    • Vandamme, P.1    Holmes, B.2    Vancanneyt, M.3
  • 49
    • 0037013965 scopus 로고    scopus 로고
    • Burkholderia anthina sp. nov. and Burkholderia pyrrocinia, two additional Burkholderia cepacia complex bacteria, may confound test results of new molecular diagnostic tools
    • Vandamme, P., Henry, D., Coenye, T., Nzula, S., Vancanneyt, M., LiPuma, J. J., Speert, D. P., Govan, J. R. W. & Mahenthiralingam, E. (2002). Burkholderia anthina sp. nov. and Burkholderia pyrrocinia, two additional Burkholderia cepacia complex bacteria, may confound test results of new molecular diagnostic tools. FEMS Immunol Med Microbiol 33, 143-149.
    • (2002) FEMS Immunol. Med. Microbiol. , vol.33 , pp. 143-149
    • Vandamme, P.1    Henry, D.2    Coenye, T.3    Nzula, S.4    Vancanneyt, M.5    LiPuma, J.J.6    Speert, D.P.7    Govan, J.R.W.8    Mahenthiralingam, E.9
  • 50
    • 0029034693 scopus 로고
    • Genetic structure of a lotic population of Burkholderia (Pseudomonas) cepacia
    • Wise, M. G., Shimkets, L. J. & McArthur, J. V. (1995). Genetic structure of a lotic population of Burkholderia (Pseudomonas) cepacia. Appl Environ Microbiol 61, 1791-1798.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1791-1798
    • Wise, M.G.1    Shimkets, L.J.2    McArthur, J.V.3
  • 51
    • 0029662666 scopus 로고    scopus 로고
    • Temporal variation in genetic diversity and structure of a lotic population of Burkholderia (Pseudomonas) cepacia
    • Wise, M. G., McArthur, J. V., Wheat, C. & Shimkets, L. J. (1996). Temporal variation in genetic diversity and structure of a lotic population of Burkholderia (Pseudomonas) cepacia. Appl Environ Microbiol 62, 1558-1562.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 1558-1562
    • Wise, M.G.1    McArthur, J.V.2    Wheat, C.3    Shimkets, L.J.4


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