Two-photon optogenetics

Progress in Brain Research

Volumn 196, Issue , 2012, Pages 119-143

  Oron, Dan ^a   Papagiakoumou, Eirini ^b   Anselmi, F ^b   Emiliani, Valentina ^b  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^b CNRS   (France)

Author keywords

Digital holography; Generalized phase contrast; Light patterning; Optogenetics; Photoactivation; Temporal focusing

Indexed keywords

ARTICLE; CONTRAST; EXCITATION; GENETICS; HOLOGRAPHY; ILLUMINATION; IMAGE PROCESSING; INTERMETHOD COMPARISON; LIGHT; MULTIPHOTON MICROSCOPY; NONHUMAN; OPTICAL TWEEZERS; OPTICS; PHASE CONTRAST MICROSCOPY; PHOTOACTIVATION; PHOTOSTIMULATION; PRIORITY JOURNAL; SKIN PENETRATION; THREE DIMENSIONAL IMAGING; TWO PHOTON OPTOGENETICS;

EID: 84857066665     PISSN: 00796123     EISSN: 18757855     Source Type: Book Series    
DOI: 10.1016/B978-0-444-59426-6.00007-0     Document Type: Chapter

References (79)

1. Akemann W., Mutoh H., Perron A., Rossier J., Knopfel T. Imaging brain electric signals with genetically targeted voltage-sensitive fluorescent proteins. Nature Methods 2010, 7:643-649.
2. Andrasfalvy B.K., Zemelman B.V., Tang J., Vaziri A. Two-photon single-cell optogenetic control of neuronal activity by sculpted light. Proceedings of the National Academy of Sciences of the United States of America 2010, 107:11981-11986.
3. Anselmi F., Ventalon C., Begue A., Ogden D., Emiliani V. 3D imaging and photostimulation by remote focusing and holographic light patterning. Proceedings of the National Academy of Sciences of the United States of America 2011, 108:19504-19509.
4. Aravanis A.M., Wang L.P., Zhang F., Meltzer L.A., Mogri M.Z., Schneider M.B., et al. An optical neural interface: In vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology. Journal of Neural Engineering 2007, 4:S143-S156.
5. Arenkiel B.R., Peca J., Davison I.G., Feliciano C., Deisseroth K., Augustine G.J., et al. In vivo light-induced activation of neural circuitry in transgenic mice expressing channelrhodopsin-2. Neuron 2007, 54:205-218.
6. Botcherby E.J., Juskaitis R., Booth M.J., Wilson T. Aberration-free optical refocusing in high numerical aperture microscopy. Optics Letters 2007, 32:2007-2009.
7. Botcherby E.J., Smith C.W., Booth M.J., Juskaitis R., Wilson T. Arbitrary-scan imaging for two-photon microscopy. Proceedings of SPIE 2010, 756917:1-8.
8. Branco T., Clark B.A., Hausser M. Dendritic discrimination of temporal input sequences in cortical neurons. Science 2010, 329:1671-1675.
9. Cardin J.A., Carlen M., Meletis K., Knoblich U., Zhang F., Deisseroth K., et al. Driving fast-spiking cells induces gamma rhythm and controls sensory responses. Nature 2009, 459:663-667.
10. Carter A.G., Sabatini B.L. State-dependent calcium signaling in dendritic spines of striatal medium spiny neurons. Neuron 2004, 44:483-493.
11. Chanda B., Blunck R., Faria L.C., Schweizer F.E., Mody I., Bezanilla F. A hybrid approach to measuring electrical activity in genetically specified neurons. Nature Neuroscience 2005, 8:1619-1626.
12. Curtis J.E., Koss B.A., Grier D.G. Dynamic holographic optical tweezers. Optics Communications 2002, 207:169.
13. Dal Maschio M., De Stasi A.M., Benfenati F., Fellin T. Three-dimensional in vivo scanning microscopy with inertia-free focus control. Optics Letters 2011, 36:3503-3505.
14. Dal Maschio M., Difato F., Beltramo R., Blau A., Benfenati F., Fellin T. Simultaneous two-photon imaging and photo-stimulation with structured light illumination. Optics Express 2010, 18:18720-18731.
15. Dana H., Shoham S. Numerical evaluation of temporal focusing characteristics in transparent and scattering media. Optics Express 2011, 19:4937-4948.
16. Daria V.R., Stricker C., Bowman R., Redman S., Bachor H.A. Arbitrary multisite two-photon excitation in four dimensions. Applied Physics Letters 2009, 95:093701.
17. Dhawale A.K., Hagiwara A., Bhalla U.S., Murthy V.N., Albeanu D.F. Non-redundant odor coding by sister mitral cells revealed by light addressable glomeruli in the mouse. Nature Neuroscience 2010, 13:1404-1412.
18. Di Leonardo R., Ianni F., Ruocco G. Computer generation of optimal holograms for optical trap arrays. Optics Express 2007, 15:1913-1922.
19. Du R., Bi K., Zeng S., Li D., Xue S., Luo Q. Analysis of fast axial scanning scheme using temporal focusing with acousto-optic deflectors. Journal of Modern Optics 2009, 56:81-84.
20. Durst M.E., Zhu G., Xu C. Simultaneous spatial and temporal focusing for axial scanning. Optics Express 2006, 14:12243-12254.
21. Durst M.E., Zhu G., Xu C. Simultaneous spatial and temporal focusing in nonlinear microscopy. Optics Communications 2008, 281:1796-1805.
22. Emiliani V., Cojoc D., Ferrari E., Garbin V., Durieux C., Di Fabrizio E., et al. Wavefront engineering microscopy to study 3D mechanotransduction in living cells. Proceedings of SPIE 2006, 6195:61950J.
23. Farah N., Reutsky I., Shoham S. Patterned optical activation of retinal ganglion cells. Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society 2007, 2007:6369-6371.
24. Feldbauer K., Zimmermann D., Pintschovius V., Spitz J., Bamann C., Bamberg E. Channelrhodopsin-2 is a leaky proton pump. Proceedings of the National Academy of Sciences of the United States of America 2009, 106:12317-12322.
25. Fisher J.A., Barchi J.R., Welle C.G., Kim G.H., Kosterin P., Obaid A.L., et al. Two-photon excitation of potentiometric probes enables optical recording of action potentials from mammalian nerve terminals in situ. Journal of Neurophysiology 2008, 99:1545-1553.
26. Fisher J.A., Salzberg B.M., Yodh A.G. Near infrared two-photon excitation cross-sections of voltage-sensitive dyes. Journal of Neuroscience Methods 2005, 148:94-102.
27. Fricke M., Nielsen T. Two-dimensional imaging without scanning by multifocal multiphoton microscopy. Applied Optics 2005, 44:2984-2988.
28. Gerchberg R.W., Saxton W.O. A practical algorithm for the determination of the phase from image and diffraction pictures. Optik 1972, 35:237-246.
29. Glückstad J. Phase contrast image synthesis. Optics Communications 1996, 130:225.
30. Glückstad J., Mogensen P.C. Optimal phase contrast in common-path interferometry. Applied Optics 2001, 40:268-282.
31. Golan L., Reutsky I., Farah N., Shoham S. Design and characteristics of holographic neural photo-stimulation systems. Journal of Neural Engineering 2009, 6:66004.
32. Golan L., Shoham S. Speckle elimination using shift-averaging in high-rate holographic projection. Optics Express 2009, 17:1330-1339.
33. Goodman J.W. Introduction to Fourier optics 2005, Roberts & Company. 3rd ed.
34. Gradinaru V., Mogri M., Thompson K.R., Henderson J.M., Deisseroth K. Optical deconstruction of Parkinsonian neural circuitry. Science 2009, 324:354-359.
35. Gradinaru V., Thompson K.R., Zhang F., Mogri M., Kay K., Schneider M.B., et al. Targeting and readout strategies for fast optical neural control in vitro and in vivo. Journal of Neuroscience 2007, 27:14231-14238.
36. Grossman N., Poher V., Grubb M.S., Kennedy G.T., Nikolic K., McGovern B., et al. Multi-site optical excitation using ChR2 and micro-LED array. Journal of Neural Engineering 2010, 7:16004.
37. Judkewitz B., Roth A., Hausser M. Dendritic enlightenment: Using patterned two-photon uncaging to reveal the secrets of the brain's smallest dendrites. Neuron 2006, 50:180-183.
38. Kramer R.H., Fortin D.L., Trauner D. New photochemical tools for controlling neuronal activity. Current Opinion in Neurobiology 2009, 19:544-552.
39. Kravitz A.V., Freeze B.S., Parker P.R., Kay K., Thwin M.T., Deisseroth K., et al. Regulation of Parkinsonian motor behaviours by optogenetic control of basal ganglia circuitry. Nature 2010, 466:622-626.
40. Kuhn B., Denk W., Bruno R.M. In vivo two-photon voltage-sensitive dye imaging reveals top-down control of cortical layers 1 and 2 during wakefulness. Proceedings of the National Academy of Sciences of the United States of America 2008, 105:7588-7593.
41. Kwon H.B., Sabatini B.L. Glutamate induces de novo growth of functional spines in developing cortex. Nature 2011, 474:100-104.
42. Leach J., Wulff K., Sinclair G., Jordan P., Courtial J., Thomson L., et al. Interactive approach to optical tweezers control. Applied Optics 2006, 45:897.
43. Liesener J., Reicherter M., Haist T., Tiziani H.J. Multi-functional optical tweezers using computer-generated holograms. Optics Communications 2000, 185:77-82.
44. Lin J.Y. A user's guide to channelrhodopsin variants: Features, limitations and future developments. Experimental Physiology 2011, 96:19-25.
45. Losonczy A., Makara J.K., Magee J.C. Compartmentalized dendritic plasticity and input feature storage in neurons. Nature 2008, 452:436-441.
46. Losonczy A., Zemelman B.V., Vaziri A., Magee J.C. Network mechanisms of theta related neuronal activity in hippocampal CA1 pyramidal neurons. Nature Neuroscience 2010, 13:967-972.
47. Lutz C., Otis T.S., de Sars V., Charpak S., DiGregorio D.A., Emiliani V. Holographic photolysis of caged neurotransmitters. Nature Methods 2008, 5:821-827.
48. Mutoh H., Perron A., Akemann W., Iwamoto Y., Knopfel T. Optogenetic monitoring of membrane potentials. Experimental Physiology 2011, 96:13-18.
49. Nikolenko V., Peterka D.S., Yuste R. A portable laser photostimulation and imaging microscope. Journal of Neural Engineering 2010, 7:045001.
50. Nikolenko V., Poskanzer K.E., Yuste R. Two-photon photostimulation and imaging of neural circuits. Nature Methods 2007, 4:943-950.
51. Nikolenko V., Watson B.O., Araya R., Woodruff A., Peterka D.S., Yuste R. SLM microscopy: Scanless two-photon imaging and photostimulation with spatial light modulators. Frontiers in Neural Circuits 2008, 2:1-14.
52. Oron D., Silberberg Y. Harmonic generation with temporally focused ultrashort pulses. Journal of the Optical Society of America B: Optical Physics 2005, 22:2660-2663.
53. Oron D., Tal E., Silberberg Y. Scanningless depth-resolved microscopy. Optics Express 2005, 13:1468-1476.
54. Palima D., Glückstad J. Multi-wavelength spatial light shaping using generalized phase contrast. Optics Express 2008, 16:1331-1342.
55. Papagiakoumou E., Anselmi F., Bègue A., de Sars V., Gluckstad J., Isacoff E.Y., et al. Scanless two-photon excitation of channelrhodopsin-2. Nature Methods 2010, 7:848-854.
56. Papagiakoumou E., de Sars V., Emiliani V., Oron D. Temporal focusing with spatially modulated excitation. Optics Express 2009, 17:5391-5401.
57. Papagiakoumou E., de Sars V., Oron D., Emiliani V. Patterned two-photon illumination by spatiotemporal shaping of ultrashort pulses. Optics Express 2008, 16:22039-22047.
58. Peterka D.S., Takahashi H., Yuste R. Imaging voltage in neurons. Neuron 2011, 69:9-21.
59. Petreanu L., Huber D., Sobczyk A., Svoboda K. Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections. Nature Neuroscience 2007, 10:663-668.
60. Petreanu L., Mao T., Sternson S.M., Svoboda K. The subcellular organization of neocortical excitatory connections. Nature 2009, 457:1142-1145.
61. Reicherter M., Haist T., Wagemann E.U., Tiziani H.J. Optical particle trapping with computer-generated holograms written on a liquid-crystal display. Optics Letters 1999, 24:608-610.
62. Generalized phase contrast. Application in optics and photonics 2009, Springer, Atlanta. W.T. Rhodes (Ed.).
63. Rickgauer J.P., Tank D.W. Two-photon excitation of channelrhodopsin-2 at saturation. Proceedings of the National Academy of Sciences of the United States of America 2009, 106:15025-15030.
64. Rodrigo P.J., Daria V.R., Glückstad J. Real-time three-dimensional optical micromanipulation of multiple particles and living cells. Optics Letters 2004, 29:2270-2272.
65. Salter P.S., Carbone G., Botcherby E.J., Wilson T., Elston S.J., Raynes E.P. Liquid crystal director dynamics imaged using two-photon fluorescence microscopy with remote focusing. Physical Review Letters 2009, 103:257803.
66. Sohal V.S., Zhang F., Yizhar O., Deisseroth K. Parvalbumin neurons and gamma rhythms enhance cortical circuit performance. Nature 2009, 459:698-702.
67. Straub A., Durst M.E., Xu C. High speed multiphoton axial scanning through an optical fiber in a remotely scanned temporal focusing setup. Biomedical Optics Express 2011, 2:80-88.
68. Suchowski H., Oron D., Silberberg Y. Generation of a dark nonlinear focus by spatio-temporal coherent control. Optics Communications 2006, 264:482-487.
69. Tal E., Oron D., Silberberg Y. Improved depth resolution in video-rate line-scanning multiphoton microscopy using temporal focusing. Optics Letters 2005, 30:1686-1688.
70. Theer P., Denk W. On the fundamental imaging-depth limit in two-photon microscopy. Journal of the Optical Society of America A: Optics, Image Science, and Vision 2006, 23:3139-3149.
71. Tsai H.C., Zhang F., Adamantidis A., Stuber G.D., Bonci A., de Lecea L., et al. Phasic firing in dopaminergic neurons is sufficient for behavioral conditioning. Science 2009, 324:1080-1084.
72. Vaziri A., Emiliani V. Current Opinion in Neurobiology 2011, [Epub ahead of print] PMID: 22209216.
73. Wang H., Peca J., Matsuzaki M., Matsuzaki K., Noguchi J., Qiu L., et al. High-speed mapping of synaptic connectivity using photostimulation in Channelrhodopsin-2 transgenic mice. Proceedings of the National Academy of Sciences of the United States of America 2007, 104:8143-8148.
74. Witten I.B., Lin S.C., Brodsky M., Prakash R., Diester I., Anikeeva P., et al. Cholinergic interneurons control local circuit activity and cocaine conditioning. Science 2010, 330:1677-1681.
75. Wyart C., Del Bene F., Warp E., Scott E.K., Trauner D., Baier H., et al. Optogenetic dissection of a behavioural module in the vertebrate spinal cord. Nature 2009, 461:407-410.
76. Yang S., Papagiakoumou E., Guillon M., de Sars V., Tang C.M., Emiliani V. Three-dimensional holographic photostimulation of the dendritic arbor. Journal of Neural Engineering 2011, 8:046002.
77. Zahid M., Velez-Fort M., Papagiakoumou E., Ventalon C., Angulo M.C., Emiliani V. Holographic photolysis for multiple cell stimulation in mouse hippocampal slices. PLoS One 2010, 5:e9431.
78. Zernike F. How I discovered phase contrast. Science 1955, 121:345-349.
79. Zhu G., van Howe J., Durst M., Zipfel W., Xu C. Simultaneous spatial and temporal focusing of femtosecond pulses. Optics Express 2005, 13:2153-2159.