-
1
-
-
0034643323
-
Specificities of heparan sulphate proteoglycans in developmental processes
-
DOI 10.1038/35008000
-
N. Perrimon, and M. Bernfield Specificities of heparan sulphate proteoglycans in developmental processes Nature 404 2000 725 728 (Pubitemid 30212391)
-
(2000)
Nature
, vol.404
, Issue.6779
, pp. 725-728
-
-
Perrimon, N.1
Bernfield, M.2
-
2
-
-
34247610845
-
Heparan sulphate proteoglycans fine-tune mammalian physiology
-
DOI 10.1038/nature05817, PII NATURE05817
-
J.R. Bishop, M. Schuksz, and J.D. Esko Heparan sulphate proteoglycans fine-tune mammalian physiology Nature 446 2007 1030 1037 (Pubitemid 46676065)
-
(2007)
Nature
, vol.446
, Issue.7139
, pp. 1030-1037
-
-
Bishop, J.R.1
Schuksz, M.2
Esko, J.D.3
-
3
-
-
2442549670
-
Interactions of heparin/heparan sulfate with proteins: Appraisal of structural factors and experimental approaches
-
DOI 10.1093/glycob/cwh051
-
A.K. Powell, E.A. Yates, D.G. Fernig, and J.E. Turnbull Interactions of heparin/heparan sulfate with proteins: appraisal of structural factors and experimental approaches Glycobiology 14 2004 17R 30R (Pubitemid 38628108)
-
(2004)
Glycobiology
, vol.14
, Issue.4
-
-
Powell, A.K.1
Yates, E.A.2
Fernig, D.G.3
Turnbull, J.E.4
-
5
-
-
65249085846
-
On-line separations combined with MS for analysis of glycosaminoglycans
-
J. Zaia On-line separations combined with MS for analysis of glycosaminoglycans Mass Spectrom. Rev. 28 2009 254 272
-
(2009)
Mass Spectrom. Rev.
, vol.28
, pp. 254-272
-
-
Zaia, J.1
-
6
-
-
77952472941
-
Characterization of glycosaminoglycans by N-15 NMR spectroscopy and in vivo isotopic labeling
-
V.H. Pomin, J.S. Sharp, X.Y. Li, L.C. Wang, and J.H. Prestegard Characterization of glycosaminoglycans by N-15 NMR spectroscopy and in vivo isotopic labeling Anal. Chem. 82 2010 4078 4088
-
(2010)
Anal. Chem.
, vol.82
, pp. 4078-4088
-
-
Pomin, V.H.1
Sharp, J.S.2
Li, X.Y.3
Wang, L.C.4
Prestegard, J.H.5
-
7
-
-
77956031216
-
Proteoglycomics: Recent progress and future challenges
-
M. Ly, T. Laremore, and R. Linhardt Proteoglycomics: recent progress and future challenges OMICS May 2010
-
(2010)
OMICS
, Issue.MAY
-
-
Ly, M.1
Laremore, T.2
Linhardt, R.3
-
8
-
-
77956045259
-
Mass spectrometry and glycomics
-
J. Zaia Mass spectrometry and glycomics OMICS 14 2010 401 418
-
(2010)
OMICS
, vol.14
, pp. 401-418
-
-
Zaia, J.1
-
9
-
-
66749151970
-
The significance of glycosylation analysis in development of biopharmaceuticals
-
N. Kawasaki, S. Itoh, N. Hashii, D. Takakura, Y. Qin, X.Y. Huang, and T. Yamaguchi The significance of glycosylation analysis in development of biopharmaceuticals Biol. Pharm. Bull. 32 2009 796 800
-
(2009)
Biol. Pharm. Bull.
, vol.32
, pp. 796-800
-
-
Kawasaki, N.1
Itoh, S.2
Hashii, N.3
Takakura, D.4
Qin, Y.5
Huang, X.Y.6
Yamaguchi, T.7
-
10
-
-
72449162024
-
Heparan sulfate separation, sequencing, and isomeric differentiation: Ion mobility spectrometry reveals specific iduronic and glucuronic acid-containing hexasaccharides
-
M.R. Schenauer, J.K. Meissen, Y. Seo, J.B. Ames, and J.A. Leary Heparan sulfate separation, sequencing, and isomeric differentiation: ion mobility spectrometry reveals specific iduronic and glucuronic acid-containing hexasaccharides Anal. Chem. 81 2009 10179 10185
-
(2009)
Anal. Chem.
, vol.81
, pp. 10179-10185
-
-
Schenauer, M.R.1
Meissen, J.K.2
Seo, Y.3
Ames, J.B.4
Leary, J.A.5
-
11
-
-
24944569191
-
n with HOST: A heparin/HS oligosaccharide sequencing tool
-
DOI 10.1021/ac050793d
-
O.M. Saad, and J.A. Leary Heparin sequencing using enzymatic digestion and ESI-MSn with HOST: a heparin/HS oligosaccharide sequencing tool Anal. Chem. 77 2005 5902 5911 (Pubitemid 41324289)
-
(2005)
Analytical Chemistry
, vol.77
, Issue.18
, pp. 5902-5911
-
-
Saad, O.M.1
Leary, J.A.2
-
12
-
-
23944443011
-
Analysis of hyaluronan content in chondroitin sulfate preparations by using selective enzymatic digestion and electrospray ionization mass spectrometry
-
DOI 10.1016/j.ab.2005.06.041, PII S0003269705004902
-
O.M. Saad, R.A. Myers, D.L. Castleton, and J.A. Leary Analysis of hyaluronan content in chondroitin sulfate preparations by using selective enzymatic digestion and electrospray ionization mass spectrometry Anal. Biochem. 344 2005 232 239 (Pubitemid 41208133)
-
(2005)
Analytical Biochemistry
, vol.344
, Issue.2
, pp. 232-239
-
-
Saad, O.M.1
Myers, R.A.2
Castleton, D.L.3
Leary, J.A.4
-
13
-
-
0038677409
-
Compositional analysis and quantification of heparin and heparan sulfate by electrospray ionization ion trap mass spectrometry
-
DOI 10.1021/ac0340455
-
O.M. Saad, and J.A. Leary Compositional analysis and quantification of heparin and heparan sulfate by electrospray ionization ion trap mass spectrometry Anal. Chem. 75 2003 2985 2995 (Pubitemid 36830424)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.13
, pp. 2985-2995
-
-
Saad, O.M.1
Leary, J.A.2
-
14
-
-
0035417423
-
Evidence of block and randomly sequenced chondroitin polysaccharides: Sequential enzymatic digestion and quantification using ion trap tandem mass spectrometry
-
DOI 10.1021/ac010385j
-
H. Desaire, T.L. Sirich, and J.A. Leary Evidence of block and randomly sequenced chondroitin polysaccharides: sequential enzymatic digestion and quantification using ion trap tandem mass spectrometry Anal. Chem. 73 2001 3513 3520 (Pubitemid 32862355)
-
(2001)
Analytical Chemistry
, vol.73
, Issue.15
, pp. 3513-3520
-
-
Desaire, H.1
Sirich, T.L.2
Leary, J.A.3
-
15
-
-
0034482080
-
Detection and quantification of the sulfated disaccharides in chondroitin sulfate by electrospray tandem mass spectrometry
-
DOI 10.1016/S1044-0305(00)00168-9, PII S1044030500001689
-
H. Desaire, and J.A. Leary Detection and quantification of the sulfated disaccharides in chondroitin sulfate by electrospray tandem mass spectrometry J. Am. Soc. Mass Spectrom. 11 2000 916 920 (Pubitemid 34532584)
-
(2000)
Journal of the American Society for Mass Spectrometry
, vol.11
, Issue.10
, pp. 916-920
-
-
Desaire, H.1
Leary, J.A.2
-
16
-
-
25144521846
-
Quantification of isomers from a mixture of twelve heparin and heparan sulfate disaccharides using tandem mass spectrometry
-
DOI 10.1002/rcm.2079
-
J.R. Behr, Y. Matsumoto, F.M. White, and R. Sasisekharan Quantification of isomers from a mixture of twelve heparin and heparan sulfate disaccharides using tandem mass spectrometry Rapid Commun. Mass Spectrom. 19 2005 2553 2562 (Pubitemid 41338597)
-
(2005)
Rapid Communications in Mass Spectrometry
, vol.19
, Issue.18
, pp. 2553-2562
-
-
Behr, J.R.1
Matsumoto, Y.2
White, F.M.3
Sasisekharan, R.4
-
17
-
-
66449127755
-
Organ-specific heparan sulfate structural phenotypes
-
X. Shi, and J. Zaia Organ-specific heparan sulfate structural phenotypes J. Biol. Chem. 284 2009 11806 11814
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 11806-11814
-
-
Shi, X.1
Zaia, J.2
-
18
-
-
34547767471
-
Tags for the stable isotopic labeling of carbohydrates and quantitative analysis by mass spectrometry
-
DOI 10.1021/ac070581b
-
M. Bowman, and J. Zaia Novel tags for the stable isotopic labeling of carbohydrates and quantitative analysis by mass spectrometry Anal. Chem. 76 2007 5777 5784 (Pubitemid 47229829)
-
(2007)
Analytical Chemistry
, vol.79
, Issue.15
, pp. 5777-5784
-
-
Bowman, M.J.1
Zaia, J.2
-
19
-
-
33646864567
-
A tandem mass spectrometric approach to determination of chondroitin/ dermatan sulfate oligosaccharide glycoforms
-
DOI 10.1093/glycob/cwj093
-
M.J. Miller, C.E. Costello, A. Malmstrom, and J. Zaia A tandem mass spectrometric approach to determination of chondroitin/dermatan sulfate oligosaccharide glycoforms Glycobiology 16 2006 502 513 (Pubitemid 43779046)
-
(2006)
Glycobiology
, vol.16
, Issue.6
, pp. 502-513
-
-
Miller, M.J.C.1
Costello, C.E.2
Malmstrom, A.3
Zaia, J.4
-
20
-
-
33144464276
-
Glycoform quantification of chondroitin/dermatan sulfate using a liquid chromatography-tandem mass spectrometry platform
-
DOI 10.1021/bi052100t
-
A.M. Hitchcock, C.E. Costello, and J. Zaia Glycoform quantification of chondroitin/dermatan sulfate using an LC/MS/MS platform Biochemistry 45 2006 2350 2361 (Pubitemid 43271335)
-
(2006)
Biochemistry
, vol.45
, Issue.7
, pp. 2350-2361
-
-
Hitchcock, A.M.1
Costello, C.E.2
Zaia, J.3
-
21
-
-
33144464276
-
Glycoform quantification of chondroitin/dermatan sulfate using a liquid chromatography-tandem mass spectrometry platform
-
DOI 10.1021/bi052100t
-
A.M. Hitchcock, C.E. Costello, and J. Zaia Glycoform quantification of chondroitin/dermatan sulfate using a liquid chromatography-tandem mass spectrometry platform Biochemistry 45 2006 2350 2361 (Pubitemid 43271335)
-
(2006)
Biochemistry
, vol.45
, Issue.7
, pp. 2350-2361
-
-
Hitchcock, A.M.1
Costello, C.E.2
Zaia, J.3
-
22
-
-
74049083782
-
Extraction of chondroitin/dermatan sulfate glycosaminoglycans from connective tissue for mass spectrometric analysis
-
A.M. Bielik, and J. Zaia Extraction of chondroitin/dermatan sulfate glycosaminoglycans from connective tissue for mass spectrometric analysis Methods Mol. Biol. 600 2010 215 225
-
(2010)
Methods Mol. Biol.
, vol.600
, pp. 215-225
-
-
Bielik, A.M.1
Zaia, J.2
-
23
-
-
0035894311
-
Tandem mass spectrometric determination of the 4S/6S sulfation sequence in chondroitin sulfate oligosaccharides
-
DOI 10.1021/ac015577t
-
J. Zaia, J.E. McClellan, and C.E. Costello Tandem mass spectrometric determination of the 4S/6S sulfation sequence in chondroitin sulfate oligosaccharides Anal. Chem. 73 2001 6030 6039 (Pubitemid 34042221)
-
(2001)
Analytical Chemistry
, vol.73
, Issue.24
, pp. 6030-6039
-
-
Zaia, J.1
McClellan, J.E.2
Costello, C.E.3
-
24
-
-
0036682699
-
Influence of charge state on product ion mass spectra and the determination of 4S/6S sulfation sequence of chondroitin sulfate oligosaccharides
-
DOI 10.1021/ac025506+
-
J.E. McClellan, C.E. Costello, P.B. O'Connor, and J. Zaia Influence of charge state on product ion mass spectra and the determination of 4S/6S sulfation sequence of chondroitin sulfate oligosaccharides Anal. Chem. 74 2002 3760 3771 (Pubitemid 34855869)
-
(2002)
Analytical Chemistry
, vol.74
, Issue.15
, pp. 3760-3771
-
-
McClellan, J.E.1
Costello, C.E.2
O'Connor, P.B.3
Zaia, J.4
-
25
-
-
33845583633
-
Optimized extraction of glycosaminoglycans from normal and osteoarthritic cartilage for glycomics profiling
-
DOI 10.1093/glycob/cwl046
-
A.M. Hitchcock, K.E. Yates, S. Shortkroff, C.E. Costello, and J. Zaia Optimized extraction of glycosaminoglycans from normal and osteoarthritic cartilage for glycomics profiling Glycobiology 17 2007 25 35 (Pubitemid 44932813)
-
(2007)
Glycobiology
, vol.17
, Issue.1
, pp. 25-35
-
-
Hitchcock, A.M.1
Yates, K.E.2
Shortkroff, S.3
Costello, C.E.4
Zaia, J.5
-
26
-
-
42049122573
-
Comparative glycomics of connective tissue glycosaminoglycans
-
DOI 10.1002/pmic.200700787
-
A.M. Hitchcock, K.E. Yates, C.E. Costello, and J. Zaia Comparative glycomics of connective tissue glycosaminoglycans Proteomics 8 2008 1384 1397 (Pubitemid 351518550)
-
(2008)
Proteomics
, vol.8
, Issue.7
, pp. 1384-1397
-
-
Hitchcock, A.M.1
Yates, K.E.2
Costello, C.E.3
Zaia, J.4
-
27
-
-
7244239255
-
Competing fragmentation processes in tandem mass spectra of heparin-like glycosaminoglycans
-
DOI 10.1016/j.jasms.2004.06.019, PII S1044030504004829
-
E.F. Naggar, C.E. Costello, and J. Zaia Competing fragmentation processes in tandem mass spectra of heparin-like glycosaminoglycans J. Am. Soc. Mass Spectrom. 15 2004 1534 1544 (Pubitemid 39433847)
-
(2004)
Journal of the American Society for Mass Spectrometry
, vol.15
, Issue.11
, pp. 1534-1544
-
-
Naggar, E.F.1
Costello, C.E.2
Zaia, J.3
-
28
-
-
0142195724
-
Tandem mass spectrometric strategies for determination of sulfation positions and uronic acid epimerization in chondroitin sulfate oligosaccharides
-
DOI 10.1016/S1044-0305(03)00541-5
-
J. Zaia, X.Q. Li, S.Y. Chan, and C.E. Costello Tandem mass spectrometric strategies for determination of sulfation positions and uronic acid epimerization in chondroitin sulfate oligosaccharides J. Am. Soc. Mass Spectrom. 14 2003 1270 1281 (Pubitemid 37330131)
-
(2003)
Journal of the American Society for Mass Spectrometry
, vol.14
, Issue.11
, pp. 1270-1281
-
-
Zaia, J.1
Li, X.-Q.2
Chan, S.-Y.3
Costello, C.E.4
-
29
-
-
43549114332
-
Influence of Charge State and Sodium Cationization on the Electron Detachment Dissociation and Infrared Multiphoton Dissociation of Glycosaminoglycan Oligosaccharides
-
DOI 10.1016/j.jasms.2008.03.010, PII S1044030508002225
-
J.J. Wolff, T.N. Laremore, A.M. Busch, R.J. Linhardt, and I.J. Amster Influence of charge state and sodium cationization on the electron detachment dissociation and infrared multiphoton dissociation of glycosaminoglycan oligosaccharides J. Am. Soc. Mass Spectrom. 19 2008 790 798 (Pubitemid 351680701)
-
(2008)
Journal of the American Society for Mass Spectrometry
, vol.19
, Issue.6
, pp. 790-798
-
-
Wolff, J.J.1
Laremore, T.N.2
Busch, A.M.3
Linhardt, R.J.4
Amster, I.J.5
-
30
-
-
53149143124
-
Electron-induced dissociation of glycosaminoglycan tetrasaccharides
-
J.J. Wolff, T.N. Laremore, H. Aslam, R.J. Linhardt, and I.J. Amster Electron-induced dissociation of glycosaminoglycan tetrasaccharides J. Am. Soc. Mass Spectrom. 19 2008 1449 1458
-
(2008)
J. Am. Soc. Mass Spectrom.
, vol.19
, pp. 1449-1458
-
-
Wolff, J.J.1
Laremore, T.N.2
Aslam, H.3
Linhardt, R.J.4
Amster, I.J.5
-
31
-
-
39049171989
-
Electron Detachment Dissociation of Dermatan Sulfate Oligosaccharides
-
DOI 10.1016/j.jasms.2007.10.007, PII S1044030507009075
-
J.J. Wolff, T.N. Laremore, A.M. Busch, R.J. Linhardt, and I.J. Amster Electron detachment dissociation of dermatan sulfate oligosaccharides J. Am. Soc. Mass Spectrom. 19 2008 294 304 (Pubitemid 351249130)
-
(2008)
Journal of the American Society for Mass Spectrometry
, vol.19
, Issue.2
, pp. 294-304
-
-
Wolff, J.J.1
Laremore, T.N.2
Busch, A.M.3
Linhardt, R.J.4
Amster, I.J.5
-
32
-
-
65349181927
-
Electron capture dissociation, electron detachment dissociation and infrared multiphoton dissociation of sucrose octasulfate
-
J.J. Wolff, T.N. Laremore, F.E. Leach Ii, R.J. Linhardt, and I.J. Amster Electron capture dissociation, electron detachment dissociation and infrared multiphoton dissociation of sucrose octasulfate Eur. J. Mass Spectrom. (Chichester, Eng) 15 2009 275 281
-
(2009)
Eur. J. Mass Spectrom. (Chichester, Eng)
, vol.15
, pp. 275-281
-
-
Wolff, J.J.1
Laremore, T.N.2
Leach Ii, F.E.3
Linhardt, R.J.4
Amster, I.J.5
-
33
-
-
77951837705
-
Negative electron transfer dissociation of glycosaminoglycans
-
J.J. Wolff, F.E. Leach 3rd, T.N. Laremore, D.A. Kaplan, M.L. Easterling, R.J. Linhardt, and I.J. Amster Negative electron transfer dissociation of glycosaminoglycans Anal. Chem. 82 2010 3460 3466
-
(2010)
Anal. Chem.
, vol.82
, pp. 3460-3466
-
-
Wolff, J.J.1
Leach III, F.E.2
Laremore, T.N.3
Kaplan, D.A.4
Easterling, M.L.5
Linhardt, R.J.6
Amster, I.J.7
-
34
-
-
33947366516
-
Development and validation of a spectral library searching method for peptide identification from MS/MS
-
DOI 10.1002/pmic.200600625
-
H. Lam, E.W. Deutsch, J.S. Eddes, J.K. Eng, N. King, S.E. Stein, and R. Aebersold Development and validation of a spectral library searching method for peptide identification from MS/MS Proteomics 7 2007 655 667 (Pubitemid 46453760)
-
(2007)
Proteomics
, vol.7
, Issue.5
, pp. 655-667
-
-
Lam, H.1
Deutsch, E.W.2
Eddes, J.S.3
Eng, J.K.4
King, N.5
Stein, S.E.6
Aebersold, R.7
-
35
-
-
53249098366
-
Building consensus spectral libraries for peptide identification in proteomics
-
H. Lam, E.W. Deutsch, J.S. Eddes, J.K. Eng, S.E. Stein, and R. Aebersold Building consensus spectral libraries for peptide identification in proteomics Nat. Methods 5 2008 873 875
-
(2008)
Nat. Methods
, vol.5
, pp. 873-875
-
-
Lam, H.1
Deutsch, E.W.2
Eddes, J.S.3
Eng, J.K.4
Stein, S.E.5
Aebersold, R.6
-
36
-
-
41349096900
-
Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics
-
DOI 10.1152/physiolgenomics.00298.2007
-
E.W. Deutsch, H. Lam, and R. Aebersold Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics Physiol. Genom. 33 2008 18 25 (Pubitemid 351451370)
-
(2008)
Physiological Genomics
, vol.33
, Issue.1
, pp. 18-25
-
-
Deutsch, E.W.1
Lam, H.2
Aebersold, R.3
-
37
-
-
34249826390
-
Protein identification by spectral networks analysis
-
DOI 10.1073/pnas.0701130104
-
N. Bandeira, D. Tsur, A. Frank, and P.A. Pevzner Protein identification by spectral networks analysis Proc. Natl. Acad. Sci. U.S.A. 104 2007 6140 6145 (Pubitemid 47186062)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.15
, pp. 6140-6145
-
-
Bandeira, N.1
Tsur, D.2
Frank, A.3
Pevzner, P.A.4
-
38
-
-
74049091330
-
Bioinformatics in glycomics: Glycan characterization with mass spectrometric data using SimGlycan
-
A. Apte, and N.S. Meitei Bioinformatics in glycomics: glycan characterization with mass spectrometric data using SimGlycan Methods Mol. Biol. 600 2010 269 281
-
(2010)
Methods Mol. Biol.
, vol.600
, pp. 269-281
-
-
Apte, A.1
Meitei, N.S.2
-
39
-
-
77949590306
-
Software utilities for the interpretation of mass spectrometric data of glycoconjugates: Application to glycosphingolipids of human serum
-
J. Souady, D. Dadimov, S. Kirsch, L. Bindila, J. Peter-Katalinic, and S.Y. Vakhrushev Software utilities for the interpretation of mass spectrometric data of glycoconjugates: application to glycosphingolipids of human serum Rapid Commun. Mass Spectrom. 24 2010 1039 1048
-
(2010)
Rapid Commun. Mass Spectrom.
, vol.24
, pp. 1039-1048
-
-
Souady, J.1
Dadimov, D.2
Kirsch, S.3
Bindila, L.4
Peter-Katalinic, J.5
Vakhrushev, S.Y.6
-
41
-
-
33646108830
-
The role of informatics in glycobiology research with special emphasis on automatic interpretation of MS spectra
-
C.W. von der Lieth, T. Lutteke, and M. Frank The role of informatics in glycobiology research with special emphasis on automatic interpretation of MS spectra Biochim. Biophys. Acta 1760 2006 568 577
-
(2006)
Biochim. Biophys. Acta
, vol.1760
, pp. 568-577
-
-
Von Der Lieth, C.W.1
Lutteke, T.2
Frank, M.3
-
42
-
-
69549129387
-
Generation of asparagine-linked glycan structure databases and their use
-
H.Y. Gao Generation of asparagine-linked glycan structure databases and their use J. Am. Soc. Mass Spectrom. 20 2009 1739 1742
-
(2009)
J. Am. Soc. Mass Spectrom.
, vol.20
, pp. 1739-1742
-
-
Gao, H.Y.1
-
43
-
-
57449088620
-
Software tool for the structural determination of glycosaminoglycans by mass spectrometry
-
B. Tissot, A. Ceroni, A.K. Powell, H.R. Morris, E.A. Yates, J.E. Turnbull, J.T. Gallagher, A. Dell, and S.M. Haslam Software tool for the structural determination of glycosaminoglycans by mass spectrometry Anal. Chem. 80 2008 9204 9212
-
(2008)
Anal. Chem.
, vol.80
, pp. 9204-9212
-
-
Tissot, B.1
Ceroni, A.2
Powell, A.K.3
Morris, H.R.4
Yates, E.A.5
Turnbull, J.E.6
Gallagher, J.T.7
Dell, A.8
Haslam, S.M.9
-
44
-
-
84857059859
-
New mass spectrometry tools for glycosaminoglycans analysis
-
B. Tissot, S.M. Haslam, H.R. Morris, J.E. Turnbull, A.K. Powell, Z.L. Zhi, J.T. Gallagher, C.J. Robinson, and A. Dell New mass spectrometry tools for glycosaminoglycans analysis Glycobiology 16 2006 1110
-
(2006)
Glycobiology
, vol.16
, pp. 1110
-
-
Tissot, B.1
Haslam, S.M.2
Morris, H.R.3
Turnbull, J.E.4
Powell, A.K.5
Zhi, Z.L.6
Gallagher, J.T.7
Robinson, C.J.8
Dell, A.9
-
45
-
-
0016352339
-
Applications of artificial intelligence to chemistry. Use of pattern recognition and cluster analysis to determine the pharmacological activity of some organic compounds
-
K.C. Chu Applications of artificial intelligence to chemistry. Use of pattern recognition and cluster analysis to determine the pharmacological activity of some organic compounds Anal. Chem. 46 1974 1181 1187
-
(1974)
Anal. Chem.
, vol.46
, pp. 1181-1187
-
-
Chu, K.C.1
-
46
-
-
33847805249
-
Interpretation of mass spectrometry data using cluster analysis-alkyl thiolesters
-
S.R. Heller, C.L. Chang, and K.C. Chu Interpretation of mass spectrometry data using cluster analysis-alkyl thiolesters Anal. Chem. 46 1974 951
-
(1974)
Anal. Chem.
, vol.46
, pp. 951
-
-
Heller, S.R.1
Chang, C.L.2
Chu, K.C.3
-
47
-
-
38649109810
-
Clustering millions of tandem mass spectra
-
DOI 10.1021/pr070361e
-
A.M. Frank, N. Bandeira, Z. Shen, S. Tanner, S.P. Briggs, R.D. Smith, and P.A. Pevzner Clustering millions of tandem mass spectra J. Proteome Res. 7 2008 113 122 (Pubitemid 351171122)
-
(2008)
Journal of Proteome Research
, vol.7
, Issue.1
, pp. 113-122
-
-
Frank, A.M.1
Bandeira, N.2
Shen, Z.3
Tanner, S.4
Briggs, S.P.5
Smith, R.D.6
Pevzner, P.A.7
-
48
-
-
0037953090
-
Similarity among tandem mass spectra from proteomic experiments: Detection, significance, and utility
-
DOI 10.1021/ac026424o
-
D.L. Tabb, M.J. MacCoss, C.C. Wu, S.D. Anderson, and J.R. Yates 3rd Similarity among tandem mass spectra from proteomic experiments: detection, significance, and utility Anal. Chem. 75 2003 2470 2477 (Pubitemid 36582834)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.10
, pp. 2470-2477
-
-
Tabb, D.L.1
MacCoss, M.J.2
Wu, C.C.3
Anderson, S.D.4
Yates III, J.R.5
-
49
-
-
1842580753
-
Improving large-scale proteomics by clustering of mass spectrometry data
-
DOI 10.1002/pmic.200300652
-
I. Beer, E. Barnea, T. Ziv, and A. Admon Improving large-scale proteomics by clustering of mass spectrometry data Proteomics 4 2004 950 960 (Pubitemid 38445955)
-
(2004)
Proteomics
, vol.4
, Issue.4
, pp. 950-960
-
-
Beer, I.1
Barnea, E.2
Ziv, T.3
Admon, A.4
-
50
-
-
38649129381
-
A data-mining scheme for identifying peptide structural motifs responsible for different MS/MS fragmentation intensity patterns
-
DOI 10.1021/pr070106u
-
Y. Huang, G.C. Tseng, S. Yuan, L. Pasa-Tolic, M.S. Lipton, R.D. Smith, and V.H. Wysocki A data-mining scheme for identifying peptide structural motifs responsible for different MS/MS fragmentation intensity patterns J. Proteome Res. 7 2008 70 79 (Pubitemid 351171117)
-
(2008)
Journal of Proteome Research
, vol.7
, Issue.1
, pp. 70-79
-
-
Huang, Y.1
Tseng, G.C.2
Yuan, S.3
Pasa-Tolic, L.4
Lipton, M.S.5
Smith, R.D.6
Wysocki, V.H.7
-
51
-
-
20144383119
-
High throughput quantitative analysis of serum proteins using glycopeptide capture and liquid chromatography mass spectrometry
-
DOI 10.1074/mcp.M400090-MCP200
-
H. Zhang, E.C. Yi, X.J. Li, P. Mallick, K.S. Kelly-Spratt, C.D. Masselon, D.G. Camp 2nd, R.D. Smith, C.J. Kemp, and R. Aebersold High throughput quantitative analysis of serum proteins using glycopeptide capture and liquid chromatography mass spectrometry Mol. Cell. Proteomics 4 2005 144 155 (Pubitemid 40361177)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.2
, pp. 144-155
-
-
Zhang, H.1
Yi, E.C.2
Li, X.-J.3
Mallick, P.4
Kelly-Spratt, K.S.5
Masselon, C.D.6
Camp II, D.G.7
Smith, R.D.8
Kemp, C.J.9
Aebersold, R.10
-
52
-
-
53749103211
-
Discrimination analysis of mass spectrometry proteomics for ovarian cancer detection
-
Y.J. Hong, X.D. Wang, D. Shen, and S. Zeng Discrimination analysis of mass spectrometry proteomics for ovarian cancer detection Acta Pharmacol. Sin. 29 2008 1240 1246
-
(2008)
Acta Pharmacol. Sin.
, vol.29
, pp. 1240-1246
-
-
Hong, Y.J.1
Wang, X.D.2
Shen, D.3
Zeng, S.4
-
53
-
-
47549094651
-
Comparative proteomic analysis of non-small-cell lung cancer and normal controls using serum label-free quantitative shotgun technology
-
J. Pan, H.Q. Chen, Y.H. Sun, J.H. Zhang, and X.Y. Luo Comparative proteomic analysis of non-small-cell lung cancer and normal controls using serum label-free quantitative shotgun technology Lung 186 2008 255 261
-
(2008)
Lung
, vol.186
, pp. 255-261
-
-
Pan, J.1
Chen, H.Q.2
Sun, Y.H.3
Zhang, J.H.4
Luo, X.Y.5
-
54
-
-
70349974676
-
CLUE-TIPS, clustering methods for pattern analysis of LC-MS data
-
L.M. Akella, T. Rejtar, C. Orazine, M. Hincapie, and W.S. Hancock CLUE-TIPS, clustering methods for pattern analysis of LC-MS data J. Proteome Res. 8 2009 4732 4742
-
(2009)
J. Proteome Res.
, vol.8
, pp. 4732-4742
-
-
Akella, L.M.1
Rejtar, T.2
Orazine, C.3
Hincapie, M.4
Hancock, W.S.5
-
55
-
-
0029982564
-
Domain structure of heparan sulfates from bovine organs
-
DOI 10.1074/jbc.271.30.17804
-
M. Maccarana, Y. Sakura, A. Tawada, K. Yoshida, and U. Lindahl Domain structure of heparan sulfates from bovine organs J. Biol. Chem. 271 1996 17804 17810 (Pubitemid 26250756)
-
(1996)
Journal of Biological Chemistry
, vol.271
, Issue.30
, pp. 17804-17810
-
-
Maccarana, M.1
Sakura, Y.2
Tawada, A.3
Yoshida, K.4
Lindahl, U.5
-
56
-
-
77953296953
-
Extended N-sulfated domains reside at the nonreducing end of heparan sulfate chains
-
G.O. Staples, X. Shi, and J. Zaia Extended N-sulfated domains reside at the nonreducing end of heparan sulfate chains J. Biol. Chem. 285 2010 18336 18343
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 18336-18343
-
-
Staples, G.O.1
Shi, X.2
Zaia, J.3
-
57
-
-
0038290630
-
Tandem mass spectrometry of sulfated heparin-like glycosaminoglycan oligosaccharides
-
DOI 10.1021/ac0263418
-
J. Zaia, and C.E. Costello Tandem mass spectrometry of sulfated heparin-like glycosaminoglycan oligosaccharides Anal. Chem. 75 2003 2445 2455 (Pubitemid 36582831)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.10
, pp. 2445-2455
-
-
Zaia, J.1
Costello, C.E.2
-
58
-
-
0024206786
-
A systematic nomenclature for carbohydrate fragmentations in FAB-MS/MS spectra of glycoconjugates
-
B. Domon, and C.E. Costello A systematic nomenclature for carbohydrate fragmentations in FAB-MS/MS spectra of glycoconjugates Glycoconj. J. 5 1988 397
-
(1988)
Glycoconj. J.
, vol.5
, pp. 397
-
-
Domon, B.1
Costello, C.E.2
-
59
-
-
0031888036
-
High throughput protein characterization by automated reverse-phase chromatography/electrospray tandem mass spectrometry
-
A. Ducret, I. Van Oostveen, J.K. Eng, J.R. Yates 3rd, and R. Aebersold High throughput protein characterization by automated reverse-phase chromatography/electrospray tandem mass spectrometry Protein Sci. 7 1998 706 719 (Pubitemid 28130893)
-
(1998)
Protein Science
, vol.7
, Issue.3
, pp. 706-719
-
-
Ducret, A.1
Van Oostveen, I.2
Eng, J.K.3
Yates III, J.R.4
Aebersold, R.5
-
60
-
-
4444360199
-
Delineating mechanisms of dissociation for isomeric heparin disaccharides using isotope labeling and ion trap tandem mass spectrometry
-
DOI 10.1016/j.jasms.2004.05.008, PII S1044030504003447
-
O.M. Saad, and J.A. Leary Delineating mechanisms of dissociation for isomeric heparin disaccharides using isotope labeling and ion trap tandem mass spectrometry J. Am. Soc. Mass Spectrom. 15 2004 1274 1286 (Pubitemid 39165419)
-
(2004)
Journal of the American Society for Mass Spectrometry
, vol.15
, Issue.9
, pp. 1274-1286
-
-
Saad, O.M.1
Leary, J.A.2
-
61
-
-
38449089309
-
Comparison of the effects of differentially sulphated bovine kidney- and porcine intestine-derived heparan sulphate on breast carcinoma cellular behaviour
-
C.H. Guo, C.Y. Koo, B.H. Bay, P.H. Tan, and G.W. Yip Comparison of the effects of differentially sulphated bovine kidney- and porcine intestine-derived heparan sulphate on breast carcinoma cellular behaviour Int. J. Oncol. 31 2007 1415 1423
-
(2007)
Int. J. Oncol.
, vol.31
, pp. 1415-1423
-
-
Guo, C.H.1
Koo, C.Y.2
Bay, B.H.3
Tan, P.H.4
Yip, G.W.5
-
62
-
-
77953230038
-
Dermatan sulfate and heparan sulfate as a biomarker for mucopolysaccharidosis I
-
S. Tomatsu, A.M. Montano, T. Oguma, V.C. Dung, H. Oikawa, T.G. de Carvalho, M.L. Gutierrez, S. Yamaguchi, Y. Suzuki, M. Fukushi, N. Sakura, L. Barrera, K. Kida, M. Kubota, and T. Orii Dermatan sulfate and heparan sulfate as a biomarker for mucopolysaccharidosis I J. Inherit. Metab. Dis. 33 2010 141 150
-
(2010)
J. Inherit. Metab. Dis.
, vol.33
, pp. 141-150
-
-
Tomatsu, S.1
Montano, A.M.2
Oguma, T.3
Dung, V.C.4
Oikawa, H.5
De Carvalho, T.G.6
Gutierrez, M.L.7
Yamaguchi, S.8
Suzuki, Y.9
Fukushi, M.10
Sakura, N.11
Barrera, L.12
Kida, K.13
Kubota, M.14
Orii, T.15
-
63
-
-
78751514088
-
Aberrant methylation of heparan sulfate glucosamine 3-O-sulfotransferase 2 genes as a biomarker in colorectal cancer
-
Y. Tokuyama, T. Takahashi, N. Okumura, K. Nonaka, Y. Kawaguchi, K. Yamaguchi, S. Osada, A. Gazdar, and K. Yoshida Aberrant methylation of heparan sulfate glucosamine 3-O-sulfotransferase 2 genes as a biomarker in colorectal cancer Anticancer Res. 30 2010 4811 4818
-
(2010)
Anticancer Res.
, vol.30
, pp. 4811-4818
-
-
Tokuyama, Y.1
Takahashi, T.2
Okumura, N.3
Nonaka, K.4
Kawaguchi, Y.5
Yamaguchi, K.6
Osada, S.7
Gazdar, A.8
Yoshida, K.9
-
64
-
-
79251619208
-
Determination of galactosamine impurities in heparin samples by multivariate regression analysis of their (1)H NMR spectra
-
Q. Zang, D.A. Keire, R.D. Wood, L.F. Buhse, C.M. Moore, M. Nasr, A. Al-Hakim, M.L. Trehy, and W.J. Welsh Determination of galactosamine impurities in heparin samples by multivariate regression analysis of their (1)H NMR spectra Anal. Bioanal. Chem. 399 2011 635 649
-
(2011)
Anal. Bioanal. Chem.
, vol.399
, pp. 635-649
-
-
Zang, Q.1
Keire, D.A.2
Wood, R.D.3
Buhse, L.F.4
Moore, C.M.5
Nasr, M.6
Al-Hakim, A.7
Trehy, M.L.8
Welsh, W.J.9
-
65
-
-
0034684279
-
Pancreatic carcinoma is characterized by elevated content of hyaluronan and chondroitin sulfate with altered disaccharide composition
-
A.D. Theocharis, M.E. Tsara, N. Papageorgacopoulou, D.D. Karavias, and D.A. Theocharis Pancreatic carcinoma is characterized by elevated content of hyaluronan and chondroitin sulfate with altered disaccharide composition Biochim. Biophys. Acta 1502 2000 201 206
-
(2000)
Biochim. Biophys. Acta
, vol.1502
, pp. 201-206
-
-
Theocharis, A.D.1
Tsara, M.E.2
Papageorgacopoulou, N.3
Karavias, D.D.4
Theocharis, D.A.5
-
66
-
-
0036661758
-
Compositional and structural alterations of chondroitin and dermatan sulfates during the progression of atherosclerosis and aneurysmal dilatation of the human abdominal aorta
-
DOI 10.1016/S0300-9084(02)01428-1, PII S0300908402014281
-
A.D. Theocharis, D.A. Theocharis, G. De Luca, A. Hjerpe, and N.K. Karamanos Compositional and structural alterations of chondroitin and dermatan sulfates during the progression of atherosclerosis and aneurysmal dilatation of the human abdominal aorta Biochimie 84 2002 667 674 (Pubitemid 35282540)
-
(2002)
Biochimie
, vol.84
, Issue.7
, pp. 667-674
-
-
Theocharis, A.D.1
Theocharis, D.A.2
De Luca, G.3
Hjerpe, A.4
Karamanos, N.K.5
-
67
-
-
77956641177
-
Proteoglycans in health and disease: Novel roles for proteoglycans in malignancy and their pharmacological targeting
-
A.D. Theocharis, S.S. Skandalis, G.N. Tzanakakis, and N.K. Karamanos Proteoglycans in health and disease: novel roles for proteoglycans in malignancy and their pharmacological targeting FEBS J. 277 2010 3904 3923
-
(2010)
FEBS J.
, vol.277
, pp. 3904-3923
-
-
Theocharis, A.D.1
Skandalis, S.S.2
Tzanakakis, G.N.3
Karamanos, N.K.4
-
68
-
-
46849088581
-
Heparan sulphate biosynthesis and disease
-
DOI 10.1093/jb/mvn040
-
S. Nadanaka, and H. Kitagawa Heparan sulphate biosynthesis and disease J. Biochem. 144 2008 7 14 (Pubitemid 351957475)
-
(2008)
Journal of Biochemistry
, vol.144
, Issue.1
, pp. 7-14
-
-
Nadanaka, S.1
Kitagawa, H.2
-
69
-
-
79251494127
-
Glycosaminoglycans as key molecules in atherosclerosis: The role of versican and hyaluronan
-
D.E. Karangelis, I. Kanakis, A.P. Asimakopoulou, E. Karousou, A. Passi, A.D. Theocharis, F. Triposkiadis, N.B. Tsilimingas, and N.K. Karamanos Glycosaminoglycans as key molecules in atherosclerosis: the role of versican and hyaluronan Curr. Med. Chem. 17 2010 4018 4026
-
(2010)
Curr. Med. Chem.
, vol.17
, pp. 4018-4026
-
-
Karangelis, D.E.1
Kanakis, I.2
Asimakopoulou, A.P.3
Karousou, E.4
Passi, A.5
Theocharis, A.D.6
Triposkiadis, F.7
Tsilimingas, N.B.8
Karamanos, N.K.9
|