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Volumn 6, Issue 12, 2011, Pages 1987-1992

Transcriptional and metabolic programs following exposure of plants to UV-B irradiation

Author keywords

Arabidopsis thaliana; Flavonoid; Light responses; Metabolic responses; Network analysis; Transcriptome analysis; UV B protectant; Uv b signaling cascade

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA;

EID: 84856635485     PISSN: 15592316     EISSN: 15592324     Source Type: Journal    
DOI: 10.4161/psb/6.12.18240     Document Type: Article
Times cited : (46)

References (31)
  • 1
    • 33747470675 scopus 로고    scopus 로고
    • Constitutively photomorphogenic1 is required for the uv-b response in arabidopsis
    • PMID:16829591;DOI:10.1105/tpc.105.040097
    • Oravecz A, Baumann A, Mate Z, Brzezinska A, Molinier J, Oakeley EJ, et al. Constitutively photomorphogenic1 is required for the uv-b response in arabidopsis. Plant Cell 2006; 18:1975-90; PMID:16829591;DOI:10.1105/tpc.105.040097.
    • (2006) Plant Cell , vol.18 , pp. 1975-1990
    • Oravecz, A.1    Baumann, A.2    Mate, Z.3    Brzezinska, A.4    Molinier, J.5    Oakeley, E.J.6
  • 2
    • 79958270962 scopus 로고    scopus 로고
    • Does cell cycle arrest occur in plant under solar uv-b radiation?
    • PMID:21543903; DOI:10.4161/psb.6.6.15317
    • Jiang L, Wang Y, Björn LO, Li S. Does cell cycle arrest occur in plant under solar uv-b radiation? Plant Signal Behav 2011; 6:892-4; PMID:21543903; DOI:10.4161/psb.6.6.15317.
    • (2011) Plant Signal Behav , vol.6 , pp. 892-894
    • Jiang, L.1    Wang, Y.2    Björn, L.O.3    Li, S.4
  • 3
    • 79953272725 scopus 로고    scopus 로고
    • Perception of uv-b by the arabidopsis uvr8 protein
    • PMID:21454788; DOI:10.1126/science.1200660
    • Rizzini L, Favory JJ, Cloix C, Faggionato D, O'Hara A, Kaiserli E, et al. Perception of uv-b by the arabidopsis uvr8 protein. Science 2011; 332:103-6; PMID:21454788; DOI:10.1126/science.1200660.
    • (2011) Science , vol.332 , pp. 103-106
    • Rizzini, L.1    Favory, J.J.2    Cloix, C.3    Faggionato, D.4    O'Hara, A.5    Kaiserli, E.6
  • 4
    • 0842299514 scopus 로고    scopus 로고
    • Genome-wide analysis of gene expression reveals function of the bzip transcription factor hy5 in the uv-b response of arabidopsis
    • PMID:14739338; DOI:10.1073/pnas.0308044100
    • Ulm R, Baumann A, Oravecz A, Mate Z, Adam E, Oakeley EJ, et al. Genome-wide analysis of gene expression reveals function of the bzip transcription factor hy5 in the uv-b response of arabidopsis. Proc Natl Acad Sci USA 2004; 101:1397-402; PMID:14739338; DOI:10.1073/pnas.0308044100.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 1397-1402
    • Ulm, R.1    Baumann, A.2    Oravecz, A.3    Mate, Z.4    Adam, E.5    Oakeley, E.J.6
  • 5
    • 0000703267 scopus 로고
    • Arabidopsis flavonoid mutants are hypersensitive to uv-b irradiation
    • PMID:12271060
    • Li J, Oulee TM, Raba R, Amundson RG, Last RL. Arabidopsis flavonoid mutants are hypersensitive to uv-b irradiation. Plant Cell 1993; 5:171-9; PMID:12271060.
    • (1993) Plant Cell , vol.5 , pp. 171-179
    • Li, J.1    Oulee, T.M.2    Raba, R.3    Amundson, R.G.4    Last, R.L.5
  • 6
    • 72049098805 scopus 로고    scopus 로고
    • The arabidopsis bzip transcription factor hy5 regulates expression of the pfg1/myb12 gene in response to light and ultravioletb radiation
    • PMID:19895401
    • Stracke R, Favory JJ, Gruber H, Bartelniewoehner L, Bartels S, Binkert M, et al. The arabidopsis bzip transcription factor hy5 regulates expression of the pfg1/myb12 gene in response to light and ultravioletb radiation. Plant Cell Environ 2010; 33:88-103; PMID:19895401.
    • (2010) Plant Cell Environ , vol.33 , pp. 88-103
    • Stracke, R.1    Favory, J.J.2    Gruber, H.3    Bartelniewoehner, L.4    Bartels, S.5    Binkert, M.6
  • 7
    • 79960214215 scopus 로고    scopus 로고
    • Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of arabidopsis to ultraviolet-b light
    • PMID:21466600; DOI:10.1111/j.1365-313X.2011.04599.x
    • Kusano M, Tohge T, Fukushima A, Kobayashi M, Hayashi N, Otsuki H, et al. Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of arabidopsis to ultraviolet-b light. Plant J 2011; 67:354-69; PMID:21466600; DOI:10.1111/j.1365-313X.2011.04599.x.
    • (2011) Plant J , vol.67 , pp. 354-369
    • Kusano, M.1    Tohge, T.2    Fukushima, A.3    Kobayashi, M.4    Hayashi, N.5    Otsuki, H.6
  • 8
    • 69649088670 scopus 로고    scopus 로고
    • Uv-b action spectrum for uvr8-mediated hy5 transcript accumulation in arabidopsis
    • PMID:19558421; DOI:10.1111/j.1751-097.2009.00579.x
    • Brown BA, Headland LR, Jenkins GI. Uv-b action spectrum for uvr8-mediated hy5 transcript accumulation in arabidopsis. Photochem Photobiol 2009; 85:1147-55; PMID:19558421; DOI:10.1111/j.1751-097.2009.00579.x.
    • (2009) Photochem Photobiol , vol.85 , pp. 1147-1155
    • Brown, B.A.1    Headland, L.R.2    Jenkins, G.I.3
  • 9
    • 84855357831 scopus 로고    scopus 로고
    • The influence of ascorbate on anthocyanin accumulation during high light acclimation in arabidopsis thaliana: Further evidence for redox control of anthocyanin synthesis
    • Epub ahead of print; PMID:21631536; DOI:10.1111/j.1365-3040.2011.02369.x
    • Page M, Sultana N, Paszkiewicz K, Florance H, Smirnoff N. The influence of ascorbate on anthocyanin accumulation during high light acclimation in arabidopsis thaliana: Further evidence for redox control of anthocyanin synthesis. Plant Cell Environ 2011; Epub ahead of print; PMID:21631536; DOI:10.1111/j.1365-3040.2011.02369.x.
    • (2011) Plant Cell Environ
    • Page, M.1    Sultana, N.2    Paszkiewicz, K.3    Florance, H.4    Smirnoff, N.5
  • 10
    • 0034782505 scopus 로고    scopus 로고
    • The protective functions of carotenoid and flavonoid pigments against excess visible radiation at chilling temperature investigated in arabidopsis npq and tt mutants
    • PMID:11722132; DOI:10.1007/s004250100572
    • Harvaux M, Kloppstech K. The protective functions of carotenoid and flavonoid pigments against excess visible radiation at chilling temperature investigated in arabidopsis npq and tt mutants. Planta 2001; 213:953-66; PMID:11722132; DOI:10.1007/s004250100572.
    • (2001) Planta , vol.213 , pp. 953-966
    • Harvaux, M.1    Kloppstech, K.2
  • 11
    • 34247200577 scopus 로고    scopus 로고
    • The atgenexpress global stress expression data set: Protocols, evaluation and model data analysis of uv-b light, drought and cold stress responses
    • PMID:17376166; DOI:10.1111/j.1365-313X.2007.03052.x
    • Kilian J, Whitehead D, Horak J, Wanke D, Weinl S, Batistic O, et al. The atgenexpress global stress expression data set: Protocols, evaluation and model data analysis of uv-b light, drought and cold stress responses. Plant J 2007; 50:347-63; PMID:17376166; DOI:10.1111/j.1365-313X.2007.03052.x.
    • (2007) Plant J , vol.50 , pp. 347-363
    • Kilian, J.1    Whitehead, D.2    Horak, J.3    Wanke, D.4    Weinl, S.5    Batistic, O.6
  • 12
    • 77954396635 scopus 로고    scopus 로고
    • Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function
    • PMID:20539294; DOI:10.1038/nprot.2010.82
    • Tohge T, Fernie AR. Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function. Nat Protoc 2010; 5:1210-27; PMID:20539294; DOI:10.1038/nprot.2010.82
    • (2010) Nat Protoc , vol.5 , pp. 1210-1227
    • Tohge, T.1    Fernie, A.R.2
  • 13
    • 66449126361 scopus 로고    scopus 로고
    • Signal transduction in responses to uv-b radiation
    • PMID:19400728; DOI:10.1146/annurev.arplant.59.032607.092953
    • Jenkins GI. Signal transduction in responses to uv-b radiation. Annu Rev Plant Biol 2009; 60:407-31; PMID:19400728; DOI:10.1146/annurev.arplant.59.032607.092953.
    • (2009) Annu Rev Plant Biol , vol.60 , pp. 407-431
    • Jenkins, G.I.1
  • 14
    • 62049085316 scopus 로고    scopus 로고
    • Interaction of cop1 and uvr8 regulates uv-b-induced photomorphogenesis and stress acclimation in arabidopsis
    • PMID:19165148; DOI:10.1038/emboj.2009.4
    • Favory JJ, Stec A, Gruber H, Rizzini L, Oravecz A, Funk M, et al. Interaction of cop1 and uvr8 regulates uv-b-induced photomorphogenesis and stress acclimation in arabidopsis. EMBO J 2009; 28:591-601; PMID:19165148; DOI:10.1038/emboj.2009.4.
    • (2009) EMBO J , vol.28 , pp. 591-601
    • Favory, J.J.1    Stec, A.2    Gruber, H.3    Rizzini, L.4    Oravecz, A.5    Funk, M.6
  • 15
    • 38949188735 scopus 로고    scopus 로고
    • Uv-b signaling pathways with different fluence-rate response profiles are distinguished in mature arabidopsis leaf tissue by requirement for uvr8, hy5 and hyh
    • PMID:18055587; DOI:10.1104/pp.107.108456
    • Brown BA, Jenkins GI. Uv-b signaling pathways with different fluence-rate response profiles are distinguished in mature arabidopsis leaf tissue by requirement for uvr8, hy5 and hyh. Plant Physiol 2008; 146:576-88; PMID:18055587; DOI:10.1104/pp.107.108456.
    • (2008) Plant Physiol , vol.146 , pp. 576-588
    • Brown, B.A.1    Jenkins, G.I.2
  • 16
    • 33747142356 scopus 로고    scopus 로고
    • Suppression of both elip1 and elip2 in arabidopsis does not affect tolerance to photoinhibition and photooxidative stress
    • PMID:16778010; DOI:10.1104/pp.106.083055
    • Rossini S, Casazza AP, Engelmann ECM, Havaux M, Jennings RC, Soave C. Suppression of both elip1 and elip2 in arabidopsis does not affect tolerance to photoinhibition and photooxidative stress. Plant Physiol 2006; 141:1264-73; PMID:16778010; DOI:10.1104/pp.106.083055.
    • (2006) Plant Physiol , vol.141 , pp. 1264-1273
    • Rossini, S.1    Casazza, A.P.2    Engelmann, E.C.M.3    Havaux, M.4    Jennings, R.C.5    Soave, C.6
  • 17
    • 17044369876 scopus 로고    scopus 로고
    • Functional genomics by integrated analysis of metabolome and transcriptome of arabidopsis plants overexpressing an myb transcription factor
    • PMID:15807784; DOI:10.1111/j.1365-313X.2005.02371.x
    • Tohge T, Nishiyama Y, Hirai MY, Yano M, Nakajima J, Awazuhara M, et al. Functional genomics by integrated analysis of metabolome and transcriptome of arabidopsis plants overexpressing an myb transcription factor. Plant J 2005; 42:218-35; PMID:15807784; DOI:10.1111/j.1365-313X.2005.02371.x.
    • (2005) Plant J , vol.42 , pp. 218-235
    • Tohge, T.1    Nishiyama, Y.2    Hirai, M.Y.3    Yano, M.4    Nakajima, J.5    Awazuhara, M.6
  • 18
    • 0035205583 scopus 로고    scopus 로고
    • Atmyb4: A transcription factor general in the battle against uv
    • PMID:11286899; DOI:10.1016/S1360-1385(01)01915-X
    • Hemm MR, Herrmann KM, Chapple C. Atmyb4: A transcription factor general in the battle against uv. Trends Plant Sci 2001; 6:135-6; PMID:11286899; DOI:10.1016/S1360-1385(01)01915-X.
    • (2001) Trends Plant Sci , vol.6 , pp. 135-136
    • Hemm, M.R.1    Herrmann, K.M.2    Chapple, C.3
  • 19
    • 67449151623 scopus 로고    scopus 로고
    • Arabidopsis radical-induced cell death1 is involved in uv-b signaling
    • PMID:19492112; DOI:10.1039/b901187k
    • Jiang L, Wang Y, Bjorn LO, Li SS. Arabidopsis radical-induced cell death1 is involved in uv-b signaling. Photochem Photobiol Sci 2009; 8:838-46; PMID:19492112; DOI:10.1039/b901187k.
    • (2009) Photochem Photobiol Sci , vol.8 , pp. 838-846
    • Jiang, L.1    Wang, Y.2    Bjorn, L.O.3    Li, S.S.4
  • 20
    • 0034669209 scopus 로고    scopus 로고
    • Transcriptional repression by atmyb4 controls production of uv-protecting sunscreens in arabidopsis
    • PMID:11080161; DOI:10.1093/emboj/19.22.6150
    • Jin H, Cominelli E, Bailey P, Parr A, Mehrtens F, Jones J, et al. Transcriptional repression by atmyb4 controls production of uv-protecting sunscreens in arabidopsis. EMBO J 2000; 19:6150-61; PMID:11080161; DOI:10.1093/emboj/19.22.6150.
    • (2000) EMBO J , vol.19 , pp. 6150-6161
    • Jin, H.1    Cominelli, E.2    Bailey, P.3    Parr, A.4    Mehrtens, F.5    Jones, J.6
  • 21
    • 37849020436 scopus 로고    scopus 로고
    • Decoding genes with coexpression networks and metabolomics-'majority report by precogs'
    • PMID:18160330; DOI:10.1016/j. tplants.2007.10.006
    • Saito K, Hirai MY, Yonekura-Sakakibara K. Decoding genes with coexpression networks and metabolomics-'majority report by precogs'. Trends Plant Sci 2008; 13:36-43; PMID:18160330; DOI:10.1016/j. tplants.2007.10.006.
    • (2008) Trends Plant Sci , vol.13 , pp. 36-43
    • Saito, K.1    Hirai, M.Y.2    Yonekura-Sakakibara, K.3
  • 22
    • 33846061087 scopus 로고    scopus 로고
    • A database of co-expressed genes and cis elements for identifying co-regulated gene groups in arabidopsis
    • PMID:17130150; DOI:10.1093/nar/gkl783
    • Obayashi T, Kinoshita K, Nakai K, Shibaoka M, Hayashi S, Saeki M, et al. A database of co-expressed genes and cis elements for identifying co-regulated gene groups in arabidopsis. Nucleic Acids Res 2007; 35:863-9; PMID:17130150; DOI:10.1093/nar/gkl783.
    • (2007) Nucleic Acids Res , vol.35 , pp. 863-869
    • Obayashi, T.1    Kinoshita, K.2    Nakai, K.3    Shibaoka, M.4    Hayashi, S.5    Saeki, M.6
  • 23
    • 0042890597 scopus 로고    scopus 로고
    • Gene expression profiling in response to ultraviolet radiation in maize genotypes with varying flavonoid content
    • PMID:12913132; DOI:10.1104/pp.103.022871
    • Casati P, Walbot V. Gene expression profiling in response to ultraviolet radiation in maize genotypes with varying flavonoid content. Plant Physiol 2003; 132:1739-54; PMID:12913132; DOI:10.1104/pp.103.022871.
    • (2003) Plant Physiol , vol.132 , pp. 1739-1754
    • Casati, P.1    Walbot, V.2
  • 24
    • 49049093604 scopus 로고    scopus 로고
    • Flavonoid profiling and biosynthetic gene expression in flesh and peel of two tomato genotypes grown under uv-b-depleted conditions during ripening
    • PMID:18564848; DOI:10.1021/jf8003338
    • Giuntini D, Lazzeri V, Calvenzani V, DallAsta C, Galaverna G, Tonelli C, et al. Flavonoid profiling and biosynthetic gene expression in flesh and peel of two tomato genotypes grown under uv-b-depleted conditions during ripening. J Agric Food Chem 2008; 56:5905-15; PMID:18564848; DOI:10.1021/jf8003338.
    • (2008) J Agric Food Chem , vol.56 , pp. 5905-5915
    • Giuntini, D.1    Lazzeri, V.2    Calvenzani, V.3    Dallasta, C.4    Galaverna, G.5    Tonelli, C.6
  • 25
    • 27644565640 scopus 로고    scopus 로고
    • Dcmyb1 acts as a transcriptional activator of the carrot phenylalanine ammonia-lyase gene (dcpal1) in response to elicitor treatment, uv-b irradiation and the dilution effect
    • PMID:16270227; DOI:10.1007/s11103-005-0910-6
    • Maeda K, Kimura S, Demura T, Takeda J, Ozeki Y. Dcmyb1 acts as a transcriptional activator of the carrot phenylalanine ammonia-lyase gene (dcpal1) in response to elicitor treatment, uv-b irradiation and the dilution effect. Plant Mol Biol 2005; 59:739-52; PMID:16270227; DOI:10.1007/s11103-005-0910-6.
    • (2005) Plant Mol Biol , vol.59 , pp. 739-752
    • Maeda, K.1    Kimura, S.2    Demura, T.3    Takeda, J.4    Ozeki, Y.5
  • 26
    • 77952065511 scopus 로고    scopus 로고
    • Proteome and flavonoid analysis reveals distinct responses of epidermal tissue and whole leaves upon uv-b radiation of barley (Hordeum vulgare L.) seedlings
    • PMID:20307098; DOI:10.1021/pr901113z
    • Kaspar S, Matros A, Mock HP. Proteome and flavonoid analysis reveals distinct responses of epidermal tissue and whole leaves upon uv-b radiation of barley (Hordeum vulgare L.) seedlings. J Proteome Res 2010; 9:2402-11; PMID:20307098; DOI:10.1021/pr901113z.
    • (2010) J Proteome Res , vol.9 , pp. 2402-2411
    • Kaspar, S.1    Matros, A.2    Mock, H.P.3
  • 27
    • 55749105106 scopus 로고    scopus 로고
    • Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors
    • PMID:18953354; DOI:10.1038/nbt.1506
    • Butelli E, Titta L, Giorgio M, Mock HP, Matros A, Peterek S, et al. Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors. Nat Biotechnol 2008; 26:1301-8; PMID:18953354; DOI:10.1038/nbt.1506
    • (2008) Nat Biotechnol , vol.26 , pp. 1301-1308
    • Butelli, E.1    Titta, L.2    Giorgio, M.3    Mock, H.P.4    Matros, A.5    Peterek, S.6
  • 28
    • 77952799294 scopus 로고    scopus 로고
    • Cop: A database for characterizing co-expressed gene modules with biological information in plants
    • PMID:20305269; DOI:10.1093/ bioinformatics/btq121
    • Ogata Y, Suzuki H, Sakurai N, Shibata D. Cop: A database for characterizing co-expressed gene modules with biological information in plants. Bioinformatics 2010; 26:1267-8; PMID:20305269; DOI:10.1093/ bioinformatics/btq121.
    • (2010) Bioinformatics , vol.26 , pp. 1267-1268
    • Ogata, Y.1    Suzuki, H.2    Sakurai, N.3    Shibata, D.4
  • 29
    • 82755168200 scopus 로고    scopus 로고
    • From models to crop species: Caveats and solutions for translational metabolomics
    • DOI:10.3389/fpls.2011.00061
    • Tohge T, Mettler T, Arrivault S, Carroll AJ, Stitt M, Fernie AR. From models to crop species: Caveats and solutions for translational metabolomics. Front Physio 2011; 2:61; DOI:10.3389/fpls.2011.00061.
    • (2011) Front Physio , vol.2 , pp. 61
    • Tohge, T.1    Mettler, T.2    Arrivault, S.3    Carroll, A.J.4    Stitt, M.5    Fernie, A.R.6
  • 30
    • 84856666825 scopus 로고    scopus 로고
    • Grand challenges in plant physiology: The underpinning of translational research
    • DOI:10.3389/fpls.2011.00048
    • Huber SC. Grand challenges in plant physiology: The underpinning of translational research. Front Physio 2011; 2:1-5; DOI:10.3389/fpls.2011.00048.
    • (2011) Front Physio , vol.2 , pp. 1-5
    • Huber, S.C.1
  • 31
    • 79955581503 scopus 로고    scopus 로고
    • Planet: Combined sequence and expression comparisons across plant networks derived from seven species
    • PMID:21441431; DOI:10.1105/tpc.111.083667
    • Mutwil M, Klie S, Tohge T, Giorgi FM, Wilkins O, Campbell MM, et al. Planet: Combined sequence and expression comparisons across plant networks derived from seven species. Plant Cell 2011; 23:895-910; PMID:21441431; DOI:10.1105/tpc.111.083667
    • (2011) Plant Cell , vol.23 , pp. 895-910
    • Mutwil, M.1    Klie, S.2    Tohge, T.3    Giorgi, F.M.4    Wilkins, O.5    Campbell, M.M.6


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