A rapid and robust method for selective isotope labeling of proteins

Methods

Volumn 55, Issue 4, 2011, Pages 370-378

  Lin, Myat T ^a   Sperling, Lindsay J ^a   Frericks Schmidt, Heather L ^a   Tang, Ming ^a   Samoilova, Rimma I ^b   Kumasaka, Takashi ^c   Iwasaki, Toshio ^d   Dikanov, Sergei A ^a   Rienstra, Chad M ^a   Gennis, Robert B ^a  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^b INSTITUTE OF CHEMICAL KINETICS AND COMBUSTION   (Russian Federation)

^c JAPAN SYNCHROTRON RADIATION RESEARCH INSTITUTE   (Japan)

^d NIPPON MEDICAL SCHOOL   (Japan)

Author keywords

Auxotroph; EPR; Escherichia coli; Isotope; NMR; Protein expression

Indexed keywords

AMINO ACID; CARBON 13; ENZYME; MEMBRANE PROTEIN; METALLOPROTEIN; NITROGEN 15; PROTEIN;

ARTICLE; AUXOTROPHY; BACTERIAL STRAIN; ELECTRON SPIN RESONANCE; ESCHERICHIA COLI; EXPRESSION VECTOR; ISOTOPE LABELING; MAGIC ANGLE SPINNING SOLID STATE NUCLEAR MAGNETIC RESONANCE; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; PULSED ELECTRON SPIN RESONANCE;

AMINO ACID MOTIFS; BINDING SITES; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTRON TRANSPORT COMPLEX IV; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; FERREDOXINS; HYDROGEN BONDING; IRON; ISOTOPE LABELING; MEMBRANE PROTEINS; MODELS, MOLECULAR; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; ORGANISMS, GENETICALLY MODIFIED; OXIDATION-REDUCTION; PROTEIN SUBUNITS; RECOMBINANT PROTEINS; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; SULFUR;

ESCHERICHIA COLI;

EID: 84856007116     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2011.08.019     Document Type: Article

References (38)

1. McDermott A. Annu. Rev. Biophys. 2009, 38:385-403.
2. Lin M.T., Samoilova R.I., Gennis R.B., Dikanov S.A. J. Am. Chem. Soc. 2008, 130:15768-15769.
3. Haris P.I. Biochem. Soc. Trans. 2010, 38:940-946.
4. Castellani F., van Rossum B., Diehl A., Schubert M., Rehbein K., Oschkinat H. Nature 2002, 420:98-102.
5. Hong M., Jakes K. J. Biomol. NMR 1999, 14:71-74.
6. Gammeren A.J., Hulsbergen F.B., Hollander J.G., Groot H.J. J. Biomol. NMR 2005, 31:279-293.
7. Hiller M., Higman V.A., Jehle S., van Rossum B.J., Kühlbrandt W., Oschkinat H. J. Am. Chem. Soc. 2008, 130:408-409.
8. Whittaker J.W. Methods Mol. Biol. 2007, 389:175-188.
9. Waugh D.S. J. Biomol. NMR 1996, 8:184-192.
10. Tong K.I., Yamamoto M., Tanaka T. J. Biomol. NMR 2008, 42:59-67.
11. Kainosho M., Torizawa T., Iwashita Y., Terauchi T., Mei Ono A., Guntert P. Nature 2006, 440:52-57.
12. Staunton D., Schlinkert R., Zanetti G., Colebrook S.A., Campbell I.D. Magn. Reson. Chem. 2006, 44:S2-9.
13. Sobhanifar S., Reckel S., Junge F., Schwarz D., Kai L., Karbyshev M., Löhr F., Bernhard F., Dötsch V. J. Biomol. NMR 2010, 46:33-43.
14. Studier F.W., Moffatt B.A. J. Mol. Biol. 1986, 189:113-130.
15. Dumon-Seignovert L., Cariot G., Vuillard L. Protein Expr. Purif. 2004, 37:203-206.
16. Miroux B., Walker J.E. J. Mol. Biol. 1996, 260:289-298.
17. Wagner S., Klepsch M.M., Schlegel S., Appel A., Draheim R., Tarry M., Högbom M., van Wijk K.J., Slotboom D.J., Persson J.O., de Gier J.W. Proc. Natl. Acad. Sci. USA 2008, 105:14371-14376.
18. Abramson J., Riistama S., Larsson G., Jasaitis A., Svensson-Ek M., Laakkonen L., Puustinen A., Iwata S., Wikström M. Nat. Struct. Biol. 2000, 7:910-917.
19. Iwasaki T., Kappl R., Bracic G., Shimizu N., Ohmori D., Kumasaka T. J. Biol. Inorg. Chem. 2011, 16:923-935.
20. Datsenko K.A., Wanner B.L. Proc. Natl. Acad. Sci. USA 2000, 97:6640-6645.
21. Derbise A., Lesic B., Dacheux D., Ghigo J.M., Carniel E. FEMS Immunol. Med. Microbiol. 2003, 38:113-116.
22. Frericks H.L., Zhou D.H., Yap L.L., Gennis R.B., Rienstra C.M. J. Biomol. NMR 2006, 36:55-71.
23. Van Geet A.L. Anal. Chem. 1968, 40:2227-2229.
24. Tang M., Sperling L.J., Berthold D.A., Nesbitt A.E., Gennis R.B., Rienstra C.M.J. Am. Chem. Soc. 2011, 133:4359-4366.
25. Delaglio F., Grzesiek S., Vuister G.W., Zhu G., Pfeifer J., Bax A. J. Biomol. NMR 1995, 6:277-293.
26. Morcombe C.R., Zilm K.W. J. Magn. Reson. 2003, 162:479-486.
27. Iwasaki T., Samoilova R.I., Kounosu A., Ohmori D., Dikanov S.A. J. Am. Chem. Soc. 2009, 131:13659-13667.
28. Kounosu A., Li Z., Cosper N.J., Shokes J.E., Scott R.A., Imai T., Urushiyama A., Iwasaki T. J. Biol. Chem. 2004, 279:12519-12528.
29. Iwasaki T., Kounosu A., Uzawa T., Samoilova R.I., Dikanov S.A. J. Am. Chem. Soc. 2004, 126:13902-13903.
30. Höfer P., Grupp A., Nebenführ H., Mehring M. Chem. Phys. Lett. 1986, 132:279-282.
31. Yang J., Camakaris H., Pittard J. Mol. Microbiol. 2002, 45:1407-1419.
32. Takegoshi K., Nakamura S., Terao T. Chem. Phys. Lett. 2001, 344:631-637.
33. Hellwig P., Yano T., Ohnishi T., Gennis R.B. Biochemistry 2002, 41:10675-10679.
34. Yap L.L., Samoilova R.I., Gennis R.B., Dikanov S.A. J. Biol. Chem. 2007, 282:8777-8785.
35. Beinert H., Holm R.H., Munck E. Science 1997, 277:653-659.
36. Machonkin T.E., Westler W.M., Markley J.L. Inorg. Chem. 2005, 44:779-797.
37. Lin M.T., Shubin A.A., Samoilova R.I., Narasimhulu K.V., Baldansuren A., Gennis R.B., Dikanov S.A. J. Biol. Chem. 2011, 286:10105-10114.
38. Hefke F., Bagaria A., Reckel S., Ullrich S.J., Dotsch V., Glaubitz C., Guntert P. J. Biomol. NMR 2011, 49:75-84.