-
1
-
-
0002850916
-
The genus Eubacterium
-
2nd edn, Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. G. Schlegel. Berlin: Springer
-
Andreesen, J. R. (1992). The genus Eubacterium. In The Prokaryotes, a Handbook on Habitats, Isolation and Identification of Bacteria, 2nd edn, pp. 1914-1924. Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. G. Schlegel. Berlin: Springer.
-
(1992)
The Prokaryotes, a Handbook on Habitats, Isolation and Identification of Bacteria
, pp. 1914-1924
-
-
Andreesen, J.R.1
-
2
-
-
0004270170
-
-
(editors) unit 2.4. New York: Wiley
-
Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. M., Seidman, J. G., Smith, J. A. & Struhl, K. (editors) (1994). Current Protocols in Molecular Biology, vol. 1, unit 2.4. New York: Wiley.
-
(1994)
Current Protocols in Molecular Biology
, vol.1
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Moore, D.M.4
Seidman, J.G.5
Smith, J.A.6
Struhl, K.7
-
3
-
-
0034111016
-
Phylogenetic relationships of butyrate-producing bacteria from the human gut
-
Barcenilla, A., Pryde, S. E., Martin, J. C., Duncan, S. H., Stewart, C. S., Henderson, C. & Flint, H. J. (2000). Phylogenetic relationships of butyrate-producing bacteria from the human gut. Appl Environ Microbiol 66, 1654-1661.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 1654-1661
-
-
Barcenilla, A.1
Pryde, S.E.2
Martin, J.C.3
Duncan, S.H.4
Stewart, C.S.5
Henderson, C.6
Flint, H.J.7
-
4
-
-
0018375846
-
New markers for Eubacterium lentum
-
Bokkenheuser, V. D., Winter, J., Finegold, S. M., Sutter, V. L., Ritchie, A. E., Moore, W. E. C. & Holdeman, L. V. (1979). New markers for Eubacterium lentum. Appl Environ Microbiol 37, 1001-1006.
-
(1979)
Appl. Environ. Microbiol
, vol.37
, pp. 1001-1006
-
-
Bokkenheuser, V.D.1
Winter, J.2
Finegold, S.M.3
Sutter, V.L.4
Ritchie, A.E.5
Moore, W.E.C.6
Holdeman, L.V.7
-
5
-
-
0000969160
-
Bacterial species of the rumen
-
Bryant, M. P. (1959). Bacterial species of the rumen. Bacteriol Rev 23, 125-153.
-
(1959)
Bacteriol. Rev
, vol.23
, pp. 125-153
-
-
Bryant, M.P.1
-
6
-
-
0015464618
-
Commentary on the Hungate technique for culture of anaerobic bacteria
-
Bryant, M. P. (1972). Commentary on the Hungate technique for culture of anaerobic bacteria. Am J Clin Nutr 25, 1324-1328.
-
(1972)
Am. J. Clin. Nutr
, vol.25
, pp. 1324-1328
-
-
Bryant, M.P.1
-
7
-
-
0028126829
-
The phylogeny of the genus Clostridium: Proposal for five new genera and eleven new species combinations
-
Collins, M. D., Lawson, P. A., Willems, A., Cordoba, J. J., Fernandez-Garayzabal, J., Garcia, P., Cai, J., Hippe, H. & Farrow, J. A. E. (1994). The phylogeny of the genus Clostridium: proposal for five new genera and eleven new species combinations. Int J Syst Bacteriol 44, 812-826.
-
(1994)
Int. J. Syst. Bacteriol
, vol.44
, pp. 812-826
-
-
Collins, M.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Fernandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.E.9
-
8
-
-
0032527787
-
Inhibitory activity of gut bacteria against Escherichia coli O157 mediated by dietary plant metabolites
-
Duncan, S. H., Flint, H. J. & Stewart, C. S. (1998). Inhibitory activity of gut bacteria against Escherichia coli O157 mediated by dietary plant metabolites. FEMS Microbiol Lett 164, 283-288.
-
(1998)
FEMS Microbiol. Lett
, vol.164
, pp. 283-288
-
-
Duncan, S.H.1
Flint, H.J.2
Stewart, C.S.3
-
9
-
-
0036793753
-
Acetate utilization and butyryl CoA: Acetate CoA transferase in butyrate-producing bacteria from the human large intestine
-
(in press)
-
Duncan, S. H., Barcenilla, A., Stewart, C. S., Pryde, S. E. & Flint, H. J. (2002). Acetate utilization and butyryl CoA: Acetate CoA transferase in butyrate-producing bacteria from the human large intestine. Appl Environ Microbiol (in press).
-
(2002)
Appl. Environ. Microbiol
-
-
Duncan, S.H.1
Barcenilla, A.2
Stewart, C.S.3
Pryde, S.E.4
Flint, H.J.5
-
10
-
-
0000122573
-
PHYLIP - Phylogeny inference package (version 3.2)
-
Felsenstein, J. (1989). PHYLIP - phylogeny inference package (version 3.2). Cladistics 5, 164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
11
-
-
0031692488
-
Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes
-
Franks, A. H., Harmsen, H. J. M., Raangs, G. C., Jansen, G. J., Schut, F. & Welling, G. W. (1998). Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes. Appl Environ Microbiol 64, 3336-3345.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 3336-3345
-
-
Franks, A.H.1
Harmsen, H.J.M.2
Raangs, G.C.3
Jansen, G.J.4
Schut, F.5
Welling, G.W.6
-
12
-
-
0027399530
-
Identification of protein coding regions by database similarity search
-
Gish, W. & States, D. J. (1993). Identification of protein coding regions by database similarity search. Nat Genet 3, 266-272.
-
(1993)
Nat. Genet
, vol.3
, pp. 266-272
-
-
Gish, W.1
States, D.J.2
-
13
-
-
12644253013
-
The genera Butyrivibrio, Lachnospira and Roseburia
-
2nd edn, Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. G. Schlegel. Berlin: Springer
-
Hespell, R. B. (1992). The genera Butyrivibrio, Lachnospira and Roseburia. In The Prokaryotes, a Handbook on Habitats, Isolation and Identilication of Bacteria, 2nd edn, pp. 2022-2033. Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. G. Schlegel. Berlin: Springer.
-
(1992)
The Prokaryotes, a Handbook on Habitats, Isolation and Identilication of Bacteria
, pp. 2022-2033
-
-
Hespell, R.B.1
-
14
-
-
0034777330
-
Characterisation of bacterial communities associated with toxic and non-toxic dinoflagellates: A lexandrium spp. and Scrippsiella trochoidea
-
& 7 other authors
-
Hold, G. L., Smith, E. A., Rappë, M. S. & 7 other authors (2001). Characterisation of bacterial communities associated with toxic and non-toxic dinoflagellates: A lexandrium spp. and Scrippsiella trochoidea. FEMS Microbiol Ecol 37, 161-173.
-
(2001)
FEMS Microbiol. Ecol
, vol.37
, pp. 161-173
-
-
Hold, G.L.1
Smith, E.A.2
Rappë, M.S.3
-
15
-
-
0003535096
-
-
4th edn. Blacksburg, VA: Virginia Polytechnic Institute and State University
-
Holdeman, L. V., Cato, E. P. & Moore, W. E. C. (1977). Anaerobe Laboratory Manual, 4th edn. Blacksburg, VA: Virginia Polytechnic Institute and State University.
-
(1977)
Anaerobe Laboratory Manual
-
-
Holdeman, L.V.1
Cato, E.P.2
Moore, W.E.C.3
-
16
-
-
0018828045
-
Descriptions of Eubacterium timidum sp. nov., Eubacterium brachy sp. nov., and Eubacterium nodatum sp. nov. isolated from human periodontitis
-
Holdeman, L. V., Cato, E. P., Burmeister, J. A. & Moore, W. E. C. (1980). Descriptions of Eubacterium timidum sp. nov., Eubacterium brachy sp. nov., and Eubacterium nodatum sp. nov. isolated from human periodontitis. Int J Syst Bacteriol 30, 163-169.
-
(1980)
Int. J. Syst. Bacteriol
, vol.30
, pp. 163-169
-
-
Holdeman, L.V.1
Cato, E.P.2
Burmeister, J.A.3
Moore, W.E.C.4
-
17
-
-
0000686520
-
Genetic characterization
-
Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology
-
Johnson, J.L.(1981).Genetic characterization. In Manual of Methods for General Bacteriology, pp. 450-472. Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology.
-
(1981)
Manual of Methods for General Bacteriology
, pp. 450-472
-
-
Johnson, J.L.1
-
18
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J. Mol. Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
0022619118
-
2 or formate to degrade gallate, pyrogallol, phloroglucinol and quercetin
-
2 or formate to degrade gallate, pyrogallol, phloroglucinol and quercetin. Arch Microbiol 144, 8-14.
-
(1986)
Arch. Microbiol
, vol.144
, pp. 8-14
-
-
Krumholz, L.R.1
Bryant, M.P.2
-
20
-
-
0028170111
-
The Ribosomal Database Project
-
Maidak, B. L., Larsen, N., McCaughey, M. J., Overbeek, R., Olsen, G. J., Fogel, K., Blandy, J. & Woese, C. R. (1994). The Ribosomal Database Project. Nucleic Acids Res 22, 3485-3487.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3485-3487
-
-
Maidak, B.L.1
Larsen, N.2
McCaughey, M.J.3
Overbeek, R.4
Olsen, G.J.5
Fogel, K.6
Blandy, J.7
Woese, C.R.8
-
22
-
-
0000426003
-
AL
-
Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins
-
AL. In Bergey's Manual of Systematic Bacteriology, vol. 2, pp. 1353-1373. Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
-
(1986)
Bergey's Manual of Systematic Bacteriology
, vol.2
, pp. 1353-1373
-
-
Moore, W.E.C.1
Holdeman Moore, L.V.2
-
23
-
-
0023369862
-
Effect of high-fiber and high-oil diets on the fecal flora of swine
-
Moore, W. E. C., Moore, L. V. H., Cato, E. P., Wilkins, T. D. & Kornegay, E. T. (1987). Effect of high-fiber and high-oil diets on the fecal flora of swine. Appl Environ Microbiol 53, 1638-1644.
-
(1987)
Appl. Environ. Microbiol
, vol.53
, pp. 1638-1644
-
-
Moore, W.E.C.1
Moore, L.V.H.2
Cato, E.P.3
Wilkins, T.D.4
Kornegay, E.T.5
-
24
-
-
0018521668
-
Plasmenylethanolamine: Growth factor for cholesterol-reducing Eubacterium
-
Mott, G. E. & Brinkley, A. W. (1979). Plasmenylethanolamine: growth factor for cholesterol-reducing Eubacterium. J Bacteriol 139, 755-760.
-
(1979)
J. Bacteriol
, vol.139
, pp. 755-760
-
-
Mott, G.E.1
Brinkley, A.W.2
-
26
-
-
0024311277
-
Simultaneous determination of volatile and non-volatile acidic fermentation products of anaerobes by capillary gas chromatography
-
Richardson, A. J., Calder, A. G., Stewart, C. S. & Smith, A. (1989). Simultaneous determination of volatile and non-volatile acidic fermentation products of anaerobes by capillary gas chromatography. Lett Appl Microbiol 9, 5-8.
-
(1989)
Lett. Appl. Microbiol
, vol.9
, pp. 5-8
-
-
Richardson, A.J.1
Calder, A.G.2
Stewart, C.S.3
Smith, A.4
-
27
-
-
0028962907
-
Isolation and characteristics of a wheatbran-degrading butyrivibrio from human faeces
-
Rumney, C. J., Duncan, S. H., Henderson, C. & Stewart, C. S. (1995). Isolation and characteristics of a wheatbran-degrading butyrivibrio from human faeces. Lett Appl Microbiol 20, 232-236.
-
(1995)
Lett. Appl. Microbiol
, vol.20
, pp. 232-236
-
-
Rumney, C.J.1
Duncan, S.H.2
Henderson, C.3
Stewart, C.S.4
-
28
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol. Biol. Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
29
-
-
0004136246
-
-
2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
-
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
30
-
-
0015611820
-
Subacute bacterial endocarditis caused by Eubacterium aerofaciens: Report of a case
-
Sans, M. D. & Crowder, J. G. (1973). Subacute bacterial endocarditis caused by Eubacterium aerofaciens: report of a case. Am J Clin Pathol 59, 576-580.
-
(1973)
Am. J. Clin. Pathol
, vol.59
, pp. 576-580
-
-
Sans, M.D.1
Crowder, J.G.2
-
31
-
-
0029165984
-
Role of short-chain fatty acids in the prevention of colorectal cancer
-
Scheppach, W., Bartram, H. P. & Richter, F. (1995). Role of short-chain fatty acids in the prevention of colorectal cancer. Eur J Cancer 31A, 1077-1080.
-
(1995)
Eur. J. Cancer
, vol.31 A
, pp. 1077-1080
-
-
Scheppach, W.1
Bartram, H.P.2
Richter, F.3
-
32
-
-
0033978259
-
Anaerobic degradation of flavonoids by Eubacterium ramulus
-
Schneider, H. & Blaut, M. (2000). Anaerobic degradation of flavonoids by Eubacterium ramulus. Arch Microbiol 173, 71-75.
-
(2000)
Arch. Microbiol
, vol.173
, pp. 71-75
-
-
Schneider, H.1
Blaut, M.2
-
33
-
-
0034528031
-
Degradation of quercitin-3-glucoside in gnotobiotic rats associated with human intestinal bacteria
-
Schneider, H., Simmering, R., Hartmann, L., Pforte, H. & Blaut, M. (2000). Degradation of quercitin-3-glucoside in gnotobiotic rats associated with human intestinal bacteria. J Appl Microbiol 89, 1027-1037.
-
(2000)
J. Appl. Microbiol
, vol.89
, pp. 1027-1037
-
-
Schneider, H.1
Simmering, R.2
Hartmann, L.3
Pforte, H.4
Blaut, M.5
-
34
-
-
0032793537
-
Quantification of the flavonoid-degrading bacterium Eubacterium ramulus in human fecal samples with a species-specific oligonucleotide hybridization probe
-
Simmering, R., Kleessen, B. & Blaut, M. (1 999). Quantification of the flavonoid-degrading bacterium Eubacterium ramulus in human fecal samples with a species-specific oligonucleotide hybridization probe. Appl Environ Microbiol 65, 3705-3709.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 3705-3709
-
-
Simmering, R.1
Kleessen, B.2
Blaut, M.3
-
35
-
-
0000335993
-
Roseburia cecicola gen. nov., sp. nov., a motile, obligately anaerobic bacterium from a mouse cecum
-
Stanton, T. B. & Savage, D. C. (1983a). Roseburia cecicola gen. nov., sp. nov., a motile, obligately anaerobic bacterium from a mouse cecum. Int J Syst Bacteriol 33, 618-627.
-
(1983)
Int. J. Syst. Bacteriol
, vol.33
, pp. 618-627
-
-
Stanton, T.B.1
Savage, D.C.2
-
36
-
-
0020635495
-
Colonization of gnotobiotic mice by Roseburia cecicola, a motile, obligately anaerobic bacterium from murine ceca
-
Stanton, T. B. & Savage, D. C. (1983b). Colonization of gnotobiotic mice by Roseburia cecicola, a motile, obligately anaerobic bacterium from murine ceca. Appl Environ Microbiol 45, 1677-1684.
-
(1983)
Appl. Environ. Microbiol
, vol.45
, pp. 1677-1684
-
-
Stanton, T.B.1
Savage, D.C.2
-
37
-
-
0025095895
-
The properties of forms of Ruminococcus flavefaciens which differ in their ability to degrade cotton cellulose
-
Stewart, C. S. Duncan, S. H. & Flint, H. J. (1990). The properties of forms of Ruminococcus flavefaciens which differ in their ability to degrade cotton cellulose. FEMS Microbiol Lett 72, 47-50.
-
(1990)
FEMS Microbiol. Lett
, vol.72
, pp. 47-50
-
-
Stewart, C.S.1
Duncan, S.H.2
Flint, H.J.3
-
38
-
-
0032755259
-
Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut
-
Suau, A., Bonnet, R., Sutren, M., Godon, J. J., Gibson, G. R., Collins, M. D. & Doré, J. (1999). Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut. Appl Environ Microbiol 65, 4799-4807.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 4799-4807
-
-
Suau, A.1
Bonnet, R.2
Sutren, M.3
Godon, J.J.4
Gibson, G.R.5
Collins, M.D.6
Doré, J.7
-
39
-
-
0001847424
-
Role of short-chain fatty acids in the hind gut
-
von Engelhardt, W., Bartels, J., Kirschberger, S., Meyer zu Duttingdorf, H. D. & Busche, R. (1998). Role of short-chain fatty acids in the hind gut. Vet Q 20 (Suppl. 3), S52-S59.
-
(1998)
Vet. Q
, vol.20
, Issue.SUPPL. 3
-
-
von Engelhardt, W.1
Bartels, J.2
Kirschberger, S.3
Meyer zu Duttingdorf, H.D.4
Busche, R.5
-
40
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
Weisburg, W. G., Barns, S. M., Pelletier, D. A. & Lane, D. J. (1991). 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173, 697-703.
-
(1991)
J. Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.G.1
Barns, S.M.2
Pelletier, D.A.3
Lane, D.J.4
-
41
-
-
0030061369
-
Phylogenetic analysis of Butyrivibrio strains reveals three distinct groups of species within the Clostridium subphylum of the Gram-positive bacteria
-
Willems, A., Amat-Marco, M. & Collins, M. D. (1996). Phylogenetic analysis of Butyrivibrio strains reveals three distinct groups of species within the Clostridium subphylum of the Gram-positive bacteria. Int J Syst Bacteriol 46, 195-199.
-
(1996)
Int. J. Syst. Bacteriol
, vol.46
, pp. 195-199
-
-
Willems, A.1
Amat-Marco, M.2
Collins, M.D.3
-
42
-
-
0031691877
-
Estimation of the relative abundance of different Bacteroides and Prevotella ribotypes in gut samples by restriction enzyme profiling of PCR-amplified 16S rRNA gene sequences
-
Wood, J., Scott, K. P., Avgustin, G., Newbold, C. J. & Flint, H. J. (1998). Estimation of the relative abundance of different Bacteroides and Prevotella ribotypes in gut samples by restriction enzyme profiling of PCR-amplified 16S rRNA gene sequences. Appl Environ Microbiol 64, 3683-3689.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 3683-3689
-
-
Wood, J.1
Scott, K.P.2
Avgustin, G.3
Newbold, C.J.4
Flint, H.J.5
|