메뉴 건너뛰기




Volumn 84, Issue 3, 2012, Pages 414-423

Characterization of hepatitis B virus genome variability in Iranian patients with chronic infection, a nationwide study

Author keywords

Complete genome; Genotype; Hepatitis B virus; Iranian patients; Phylogenetic analysis; Subgenotype

Indexed keywords

HEPATITIS B SURFACE ANTIGEN; LAMIVUDINE;

EID: 84855878344     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.23200     Document Type: Article
Times cited : (23)

References (50)
  • 2
  • 7
    • 37349050634 scopus 로고    scopus 로고
    • Hepatitis B virus (HBV) genotype and YMDD motif mutation profile among patients infected with HBV and untreated with lamivudine
    • Amini-Bavil-Olyaee S, Hosseini SY, Sabahi F, Alavian SM. 2008. Hepatitis B virus (HBV) genotype and YMDD motif mutation profile among patients infected with HBV and untreated with lamivudine. Int J Infect Dis 12: 318-326.
    • (2008) Int J Infect Dis , vol.12 , pp. 318-326
    • Amini-Bavil-Olyaee, S.1    Hosseini, S.Y.2    Sabahi, F.3    Alavian, S.M.4
  • 8
    • 0036330525 scopus 로고    scopus 로고
    • Genotype H: A new Amerindian genotype of hepatitis B virus revealed in Central America
    • Arauz-Ruiz P, Norder H, Robertso BH, Magnius LO. 2002. Genotype H: A new Amerindian genotype of hepatitis B virus revealed in Central America. J Gen Virol 83: 2059-2073.
    • (2002) J Gen Virol , vol.83 , pp. 2059-2073
    • Arauz-Ruiz, P.1    Norder, H.2    Robertso, B.H.3    Magnius, L.O.4
  • 12
    • 84984539148 scopus 로고    scopus 로고
    • High prevalence and mapping of pre-S deletion in hepatitis B virus carriers with progressive liver diseases
    • Chen BF, Liu CJ, Jow GM, Chen PJ, Kao JH, Chen DS. 2006. High prevalence and mapping of pre-S deletion in hepatitis B virus carriers with progressive liver diseases. Gastroenterology 130: 1153-1168.
    • (2006) Gastroenterology , vol.130 , pp. 1153-1168
    • Chen, B.F.1    Liu, C.J.2    Jow, G.M.3    Chen, P.J.4    Kao, J.H.5    Chen, D.S.6
  • 13
    • 56649089786 scopus 로고    scopus 로고
    • Combined mutations in Pre-S/surface and core promoter/Precore regions of Hepatitis B virus increase the risk of hepatocellular carcinoma: A case-control study
    • Chen CH, Changchien CS, Lee CM, Hung CH, Hu TH, Wang JH, Wang JC, Lu SN. 2008. Combined mutations in Pre-S/surface and core promoter/Precore regions of Hepatitis B virus increase the risk of hepatocellular carcinoma: A case-control study. J Infect Dis 198: 1634-1642.
    • (2008) J Infect Dis , vol.198 , pp. 1634-1642
    • Chen, C.H.1    Changchien, C.S.2    Lee, C.M.3    Hung, C.H.4    Hu, T.H.5    Wang, J.H.6    Wang, J.C.7    Lu, S.N.8
  • 15
    • 58149296156 scopus 로고    scopus 로고
    • EASL clinical practice guidelines: Management of chronic hepatitis B
    • European Association for the Study of the Liver.
    • European Association for the Study of the Liver. 2009. EASL clinical practice guidelines: Management of chronic hepatitis B. J Hepatol 50: 227-242.
    • (2009) J Hepatol , vol.50 , pp. 227-242
  • 16
    • 0000461280 scopus 로고
    • Confidence limits on phylogenesis: An approach using the bootstrap
    • Felsenstein J. 1985. Confidence limits on phylogenesis: An approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 17
    • 79954622188 scopus 로고    scopus 로고
    • Full genome characterization of hepatitis B virus strains from blood donors in Iran
    • Garmiri P, Rezvan H, Abolghasemi H, Allain JP. 2011. Full genome characterization of hepatitis B virus strains from blood donors in Iran. J Med Virol 83: 948-952.
    • (2011) J Med Virol , vol.83 , pp. 948-952
    • Garmiri, P.1    Rezvan, H.2    Abolghasemi, H.3    Allain, J.P.4
  • 18
    • 30144435062 scopus 로고    scopus 로고
    • Hepatitis B genotype and YMDD profile in an untreated Irish population
    • Horgan M, Brannigan E, Crowley B, Levis J, Fanning LJ. 2006. Hepatitis B genotype and YMDD profile in an untreated Irish population. J Clin Virol 35: 203-204.
    • (2006) J Clin Virol , vol.35 , pp. 203-204
    • Horgan, M.1    Brannigan, E.2    Crowley, B.3    Levis, J.4    Fanning, L.J.5
  • 19
    • 6444242588 scopus 로고    scopus 로고
    • Pre-S mutant surface antigens in chronic hepatitis B virus infection induce oxidative stress and DNA damage
    • Hsieh YH, Su IJ, Wang HC, Chang W, Lei HY, Lai MD, Chang WT, Huang W. 2004. Pre-S mutant surface antigens in chronic hepatitis B virus infection induce oxidative stress and DNA damage. Carcinogenesis 25: 2023-2032.
    • (2004) Carcinogenesis , vol.25 , pp. 2023-2032
    • Hsieh, Y.H.1    Su, I.J.2    Wang, H.C.3    Chang, W.4    Lei, H.Y.5    Lai, M.D.6    Chang, W.T.7    Huang, W.8
  • 20
    • 84857843973 scopus 로고    scopus 로고
    • Commentary on: A study of genotype, mutants and nucleotide sequence of HBV in Pakistan
    • Jazayeri SM. 2011. Commentary on: A study of genotype, mutants and nucleotide sequence of HBV in Pakistan. Hepat Mon 11: 289-291.
    • (2011) Hepat Mon , vol.11 , pp. 289-291
    • Jazayeri, S.M.1
  • 21
    • 67649354416 scopus 로고    scopus 로고
    • Evolution of hepatitis B genotype D in the Middle East and South Asia
    • Jazayeri SM, Carman WF. 2009. Evolution of hepatitis B genotype D in the Middle East and South Asia. Hepat Mon 9: 9-11.
    • (2009) Hepat Mon , vol.9 , pp. 9-11
    • Jazayeri, S.M.1    Carman, W.F.2
  • 22
    • 84984535720 scopus 로고    scopus 로고
    • Hepatitis B genotypes correlate with clinical outcomes in patients with chronic hepatitis B
    • Kao JH, Chen P, Lai MY, Chen DS. 2000. Hepatitis B genotypes correlate with clinical outcomes in patients with chronic hepatitis B. Gastroenterology 118: 554-559.
    • (2000) Gastroenterology , vol.118 , pp. 554-559
    • Kao, J.H.1    Chen, P.2    Lai, M.Y.3    Chen, D.S.4
  • 23
    • 34447500303 scopus 로고    scopus 로고
    • Hepatitis B virus genetic variability and evolution
    • Kay A, Zoulim F. 2007. Hepatitis B virus genetic variability and evolution. Virus Res 127: 164-176.
    • (2007) Virus Res , vol.127 , pp. 164-176
    • Kay, A.1    Zoulim, F.2
  • 24
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 25
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5: 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 26
    • 2442684578 scopus 로고    scopus 로고
    • Acute hepatitis B virus infection in Turkey: Epidemiology and genotype distribution
    • Leblebicioglu H, Eroglu C. 2004. Acute hepatitis B virus infection in Turkey: Epidemiology and genotype distribution. Clin Microbiol Infect 10: 537-541.
    • (2004) Clin Microbiol Infect , vol.10 , pp. 537-541
    • Leblebicioglu, H.1    Eroglu, C.2
  • 27
    • 1542515092 scopus 로고    scopus 로고
    • Chronic hepatitis B: Update of recommendations
    • Lok AS, McMahon BJ. 2004. Chronic hepatitis B: Update of recommendations. Hepatology 39: 857-861.
    • (2004) Hepatology , vol.39 , pp. 857-861
    • Lok, A.S.1    McMahon, B.J.2
  • 28
    • 0032889281 scopus 로고    scopus 로고
    • Full-length human immunodeficiency virus type 1 genomes from subtype C infected serocpnverters in India with evidence of intersubtype recombination
    • Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, Novak NG, Ingersoll R, Sheppard HW, Ray SC. 1999. Full-length human immunodeficiency virus type 1 genomes from subtype C infected serocpnverters in India with evidence of intersubtype recombination. J Virol 73: 152-160.
    • (1999) J Virol , vol.73 , pp. 152-160
    • Lole, K.S.1    Bollinger, R.C.2    Paranjape, R.S.3    Gadkari, D.4    Kulkarni, S.S.5    Novak, N.G.6    Ingersoll, R.7    Sheppard, H.W.8    Ray, S.C.9
  • 30
    • 84855879819 scopus 로고    scopus 로고
    • Risk factors of hepatitis B infection: Health policy makers should be aware of their importance in each community
    • Miri SM, Alavian SM. 2001. Risk factors of hepatitis B infection: Health policy makers should be aware of their importance in each community. Hepat Mon 11: 238-239.
    • (2001) Hepat Mon , vol.11 , pp. 238-239
    • Miri, S.M.1    Alavian, S.M.2
  • 32
    • 0028301224 scopus 로고
    • Complete genome, phylogenetic relatedness and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes
    • Norder H, Courouce AM, Magnius LO. 1994. Complete genome, phylogenetic relatedness and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 198: 489-503.
    • (1994) Virology , vol.198 , pp. 489-503
    • Norder, H.1    Courouce, A.M.2    Magnius, L.O.3
  • 36
    • 84857862477 scopus 로고    scopus 로고
    • Commentary on: A study of genotypes, mutants and nucleotide sequence of hepatitis B virus in Pakistan
    • Pourkarim MR, Van Ranst M. 2011. Commentary on: A study of genotypes, mutants and nucleotide sequence of hepatitis B virus in Pakistan. Hepat Mon 11: 292-294.
    • (2011) Hepat Mon , vol.11 , pp. 292-294
    • Pourkarim, M.R.1    Van Ranst, M.2
  • 39
    • 84855907054 scopus 로고    scopus 로고
    • African links and hepatitis B virus genotypes in the Republic of Yemen
    • Sallam TA, Tong CYW. 2004. African links and hepatitis B virus genotypes in the Republic of Yemen. J Med Virol 70: 529-536.
    • (2004) J Med Virol , vol.70 , pp. 529-536
    • Sallam, T.A.1    Tong, C.Y.W.2
  • 41
    • 38849088086 scopus 로고    scopus 로고
    • Naturally occurring MHR variants in Turkish patients infected with hepatitis B virus
    • Sayiner AA, Ozcan A, Sengonul A. 2008. Naturally occurring MHR variants in Turkish patients infected with hepatitis B virus. J Med Virol 80: 405-410.
    • (2008) J Med Virol , vol.80 , pp. 405-410
    • Sayiner, A.A.1    Ozcan, A.2    Sengonul, A.3
  • 44
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence aligment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL X windows interface: Flexible strategies for multiple sequence aligment aided by quality analysis tools. Nucleic Acids Res 24: 4876-4882.
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 45
    • 61449135175 scopus 로고    scopus 로고
    • A new core promoter mutation and premature stop codon in the S gene in HBV strains from Iranian patients with cirrhosis
    • Vaezjalali M, Norder H, Magnius L, Jazayeri SM, Alavian SM, Mokhtari-Azad T. 2009. A new core promoter mutation and premature stop codon in the S gene in HBV strains from Iranian patients with cirrhosis. J Viral Hepatol 16: 259-264.
    • (2009) J Viral Hepatol , vol.16 , pp. 259-264
    • Vaezjalali, M.1    Norder, H.2    Magnius, L.3    Jazayeri, S.M.4    Alavian, S.M.5    Mokhtari-Azad, T.6
  • 46
    • 0345707640 scopus 로고    scopus 로고
    • Different types of ground glass hepatocytes in chronic hepatitis B virus infection contain specific pre-S mutants that induce endoplasmic reticulum stress
    • Wang HC, Wu HC, Chen CF, Lei HY, Su IJ. 2003. Different types of ground glass hepatocytes in chronic hepatitis B virus infection contain specific pre-S mutants that induce endoplasmic reticulum stress. Am J Path 163: 2441-2449.
    • (2003) Am J Path , vol.163 , pp. 2441-2449
    • Wang, H.C.1    Wu, H.C.2    Chen, C.F.3    Lei, H.Y.4    Su, I.J.5
  • 47
    • 11844281456 scopus 로고    scopus 로고
    • Genetic variability of the S gene of hepatitis B virus: Clinical and diagnostic impact
    • Weber B. 2005. Genetic variability of the S gene of hepatitis B virus: Clinical and diagnostic impact. J Clin Virol 32: 102-112.
    • (2005) J Clin Virol , vol.32 , pp. 102-112
    • Weber, B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.