Synthetic geomicrobiology: Engineering microbe-mineral interactions for space exploration and settlement

International Journal of Astrobiology

Volumn 10, Issue 4, 2011, Pages 315-324

  Cockell, Charles S ^a  

^a OPEN UNIVERSITY   (United Kingdom)

Author keywords

biomining; Mars; moon; regolith; soil formation; synthetic geomicrobiology

Indexed keywords

BIOLOGICAL WEATHERING; BIOMINERALIZATION; EXPLORATION; GEOMICROBIOLOGY; MARS; MOON; REGOLITH; SOLIDIFICATION;

EID: 84855570132     PISSN: 14735504     EISSN: 14753006     Source Type: Journal    
DOI: 10.1017/S1473550411000164     Document Type: Article

References (66)

1. Adams, D.G. & Carr, N.G. (1981). Heterocyst differentiation and cell division in the cyanobacterium Anabaena cylindrica: effect of high light intensity. J. Cell Sci. 49, 341-352. (Pubitemid 11084732)
2. Barker, W.W. & Banfield, J.F. (1996). Biologically versus inorganically mediated weathering reactions: relationships between minerals and extracellular microbial polymers in lithobiontic communities. Chem. Geol. 132, 55-69.
3. Benzerara, K. & Menguy, N. (2009). Looking for traces of life in minerals. C. R. Palevol. 8, 617-628.
4. Billi, D., Friedmann, E.I., Hofer, K.G., Grilli Caiola, M. & Ocampo-Friedmann, R. (2000). Ionizing radiation resistance in the desiccation-tolerant cyanobacterium Chroococcidiopsis. Appl. Environ. Microbiol. 66, 1489-1492. (Pubitemid 30185621)
5. Billi, D. & Grilli Caiola, M. (1996a). Effects of nitrogen limitation and starvation on Chroococcidiopsis sp. (Chroococcales). New Phytol. 133, 563-571. (Pubitemid 126548851)
6. Budel, B., Weber, B., Kuhl, M., Pfanz, H., Sultemeyer, D. & Wessels, D. (2004). Reshaping of sandstone surfaces by cryptoendolithic cyanobacteria: bioalkalization causes chemical weathering in arid landscapes. Geobiology 2, 261-268.
7. Busch, M. (2004). Profitable asteroid mining. J. Br. Interplan. Soc. 57, 301-305.
8. Calvaruso, C., Turpault, M. & Frey-Klett, P. (2006). Root-associated bacteria contribute to mineral weathering and to mineral nutrition in trees: a budgeting analysis. Appl. Environ. Microbiol. 72, 1258-1266. (Pubitemid 43271234)
9. Certini, G. & Scalenghe, R. (2010). Do soils exist outside Earth? Planet. Space Sci. 58, 1767-1770.
10. Christensen, P.R., Wyatt, M.B., Glotch, T.D., Rogers, A.D., Anwar, S., Arvidson, R.E., Bandfield, J.L., Blaney, D.L., Budney, C., Clavin, W.M. et al. (2004). Mineralogy at Meridiani Planum from the mini-TES experiment on the Opportunity Rover. Science 306, 1733-1739. (Pubitemid 39601383)
11. Clark, C.A. & Norris, P.R. (1996). Oxidation of mineral sulphides by thermophilic microorganisms. Miner. Eng. 9, 1119-1125. (Pubitemid 126365645)
12. Cockell, C.S. (2010). Geomicrobiology beyond Earth: microbe-mineral interactions in space settlement and exploration. Trends Microbiol. 18, 304-314.
13. Cockell, C.S., Schuerger, A.C., Billi, D., Friedmann, E.I. & Panitz, C. (2005). Effects of a simulated Martian UV flux on the cyanobacterium, Chroococcidiopsis sp. 029. Astrobiology 5, 127-140. (Pubitemid 40621745)
14. Dahlgren, R., Shoji, S. & Nanzyo, M. (1993). Mineralogical characteristics of volcanic ash soils. In Volcanic Ash Soils Genesis, Properties, and Utilization, ed. Shoji, S. & Nanzyo, M., pp. 101-143. Elsevier, Amsterdam.
15. DeJong, J.T., Fritzges, M.B. & Nüsslein, K. (2006). Microbial induced cementation to control sand response to undrained shear. J. Geotech. Geoenviron. Eng. 132, 1381-1392. (Pubitemid 44781778)
16. Deng, M.D. & Coleman, J.R. (1999). Ethanol synthesis by genetic engineering in cyanobacteria. Appl. Environ. Microbiol. 65, 523-528. (Pubitemid 29075092)
17. Dong, H. & Yu, B. (2007). Geomicrobiological processes in extreme environments: a review. Episodes 30, 202-216. (Pubitemid 350031494)
18. Erhlich, H.L. & Newman, D.K. (2009). Geomicrobiology. CRC Press, Boca Raton, FL.
19. Gadd, G.M. (2010). Metals, minerals and microbes: geomicrobiology and bioremediation. Microbiology-SGM 156, 609-643.
20. Gislason, S. & Oelkers,E. (2003). The mechanism, rates, and consequences of basaltic glass dissolution. II. An experimental study of the dissolution rates of basaltic glass as a function of pH at temperatures from 6 °C to 150 °C. Geochim. Cosmochim. Acta 67, 3817-3832. (Pubitemid 37312328)
21. Glowa, K.R., Arocena, J.M. & Massicotte, H.B. (2003). Extraction of potassium and/or magnesium from selected soil minerals by Piloderma. Geomicrobiol. J. 20, 99-111. (Pubitemid 36720425)
22. Greenhagen, B.T., Lucey, P.G., Wyatt, M.B., Glotch, T.D., Allen, C.C., Arnold, J.A., Bandfield, J.L., Bowles, N.E., Hanna, K.L.D., Hayne, P.O. et al. (2010). Global silicate mineralogy of the moon from the Diviner Lunar Radiometer. Science 329, 1507-1509.
23. Gronstal, A.L., Pearson, V., Kappler, A., Anand, M., Poitrasson, F., Kee, T.P. & Cockell, C.S. (2009). Laboratory experiments on the weathering of iron meteorites and carbonaceous chondrites by iron-oxidising bacteria. Meteorit. Planet. Sci. 44, 233-248.
24. Gudbrandsson, S., Wolff-Boenisch, D., Gislason, S.R. & Oeklers, E.H. (2008). Dissolution rates of crystalline basalt at pH 4 and 10 and 25-75 °C. Miner. Mag. 72, 155-158.
25. Hendrickx, L. & Mergeay, M. (2007). From the deep sea to the stars: human life support through minimal communities. Curr. Opin. Microbiol. 10, 231-237. (Pubitemid 46963084)
26. Holmes, D.S., Cardenas, J.P., Valdes, J., Quatrini, R., Esparza, M., Osorio, H., Duarte, F., Lefimil, C. & Jedlicki, E. (2009). Comparative genomics begins to unravel the ecophysiology of bioleaching. Biohydrometall. Adv. Mater. Res. 71-73, 143-150.
27. Hu, C.X., Liu, Y.D., Zhang, D.L., Huang, Z.B. & Paulsen, B.S. (2002). Cementing mechanism of algal crusts from desert area. Chin. Sci. Bull. 47, 1361-1368. (Pubitemid 40846994)
28. Janssen, P.J., Morin, N., Mergeay, M., Leroy, B., Wattiez, R., Vallaeys, T., Waleron, K., Waleron, M., Wilmotte, A., Quillardet, P. et al. (2010). Genome sequence of the edible cyanobacterium Arthrospira sp. PCC 8005. J. Bacteriol. 192, 2465-2466.
29. Kahre, M.A., Murphy, J.R. & Haberle, R.M. (2006). Modeling the Martian dust cycle and surface dust reservoirs with the NASA Ames general circulation model. J. Geophys. Res. 111, E06008.
30. Kappler, A. & Newman, D.K. (2004). Formation of Fe(III)-minerals by Fe (II)-oxidizing photoautotrophic bacteria. Geochim. Cosmochim. Acta 68, 1217-1226. (Pubitemid 38398587)
31. 2, temperature, and time. Cosmochim. Geochim. Acta 57, 285-294. (Pubitemid 23388955)
32. Konhauser, K. (2007). An Introduction to Geomicrobiology. Blackwell Publishers, Oxford.
33. Kryzanowski, T. & Mardon, A. (1990). Mining potential of asteroid belt. Can. Min. J. 111, 43.
34. Lee, L.H. (1995). Adhesion and cohesion mechanisms of lunar dust on the Moon's surface. J. Adhes. Sci. Technol. 9, 1103-1124.
35. Lehto, K., Kanervo, E., Stahle, K., Lehto, H., Tammi, M. & Virtanen, J. (2007). Photosynthetic life support systems in the Martian conditions. In ROME: Response of Organisms to the Martian Environment, ed. C. Cockell & G. Horneck, ESA Special Publication, AP-1299. Paris.
36. Liu, Y.D., Cockell, C.S., Wang, G., Hu, C.X., Chen, L. & De Philippis, R. (2008). Control of Lunar and Martian dust-experimental insights from artificial and natural cyanobacterial and algal crusts in the desert of Inner Mongolia, China. Astrobiology 8, 75-86. (Pubitemid 351309895)
37. McGuire, M.M., Edwards, K.J., Banfield, J.F. & Hamers, R.J. (2001). Kinetics, surface chemistry, and structural evolution of microbially mediated sulphide mineral dissolution. Geochim. Cosmochim. Acta 65, 1243-1258. (Pubitemid 32393084)
38. Metayer-Levrel, G., Castanier, S., Orial, G., Loubiere, J.F. & Perthuisot, J.P. (1999). Applications of bacterial carbonatogenesis to the protection and regeneration of limestones in buildings and historic parsimony. Sediment. Geol. 126, 25-34.
39. Ming, D.W. & Henninger, D.L. (1994). Use of lunar regolith as a substrate for plant growth. Adv. Space Res. 14, 435-443.
40. Miot, J., Benzerara, K., Morin, G., Kappler, A., Bernard, S., Obst, M., Férard, C., Skouri-Panet, F., Guigner, J.-M., Posth, N. et al. (2009b). Iron biomineralization by anaerobic neutrophilic iron-oxidizing bacteria. Geochim. Cosmochim. Acta 73, 696-711.
41. Norris, P.R., Burton, N.P. & Foulis, N.A.M. (2000). Acidophiles in bioreactor mineral processing. Extremophiles 4, 71-76.
42. Norton, O.R., Ort, K. & Norton, D.S. (1998). Rocks from Space: Meteorites and Meteorite Hunters. Mountain Press Publishing Company, Missoula, MT.
43. Oelkers, E.H. & Schott, J. (2001). An experimental study of enstatite dissolution rates as a function of pH, temperature, and aqueous Mg and Si concentration, and the mechanism of pyroxene/pyroxenoid dissolution. Geochim. Cosmochim. Acta 65, 1219-1231. (Pubitemid 32393082)
44. Olsson-Francis, K. & Cockell, C.S. (2010). Use of cyanobacteria for in-situ resource use in space applications. Planet. Space Sci. 58, 1279-1285.
45. Olsson-Francis, K., de la Torre, R. &Cockell, C.S. (2010a). Isolation of novel extreme-tolerant cyanobacteria from a coastal rock-dwelling microbial community using exposure to low Earth orbit. Appl. Environ. Microbiol. 76, 2115-2121.
46. Olsson-Francis, K., Van Houdt, R., Mergeay, M., Leys, N. & Cockell, C.S. (2010b). Micro-array analysis of a microbe-mineral interaction. Geobiology 8, 446-456.
47. Pickard, W.F. (2008). Geochemical constraints on sustainable development: can an advanced global economy achieve long-term stability. Global Planet. Change 61, 285-299. (Pubitemid 351491613)
48. Pronk, J.T. & Johnson, D.B. (1992). Oxidation and reduction of iron by acidophilic bacteria. Geomicrobiol. J. 10, 153-171. (Pubitemid 23394485)
49. Rawlings, D.E. (2005). Characteristics and adaptability of iron- and sulphur-oxidising microorganisms used for the recovery of metals from minerals and their concentrates. Microbial. Cell Factories 4, 1-15.
50. Rogers, J.R., Bennett, P.C. & Choi, W.J. (1998). Feldspars as a source of nutrients for microorganisms. Am. Miner. 83, 1532-1540.
51. Ruzicka, A., Snyder, G.A. & Taylor, L.A. (2001). Comparative geochemistry of basalts from the moon, earth, HED asteroid, and Mars: implications for the origin of the moon. Geochim. Cosmochim. Acta 65, 979-997. (Pubitemid 32296348)
52. Sato, Y., Nishihara, H., Yoshida, M., Watanabe, M., Rondal, J.D. & Ohta, H. (2004). Occurrence of hydrogen-oxidizing Ralstonia species as primary microorganisms in the Mt. Pinatubo volcanic mudflow deposits. Soil Sci. Plant Nut. 50, 855-861. (Pubitemid 40033566)
53. Schippers, A., Breuker, A., Blazejak, A., Bosecker, K., Kock, D. & Wright, T.L. (2010). The biogeochemistry and microbiology of sulfidic mine waste and bioleaching dumps and heaps, and novel Fe(II)-oxidizing bacteria. Hydrometallurgy 104, 342-350.
54. Schroeter, A.W. & Sand, W. (1993). Estimations on the degradability of ores and bacterial leaching activity using short time microcalorimetric tests. FEMS Microbiol. Rev. 11, 79-86. (Pubitemid 23238120)
55. Silverman, M.P. & Lundgren, D.G. (1959). Studies on the chemoautotrophic iron bacterium Ferrobacillus ferrooxidans. J. Bacteriol. 77, 642-647.
56. Solisio, C., Lodi, A. & Veglio, F. (2002). Bioleaching of zinc and aluminium from industrial waste sludges by means of Thiobacillus ferrooxidans. Waste Manage. 22, 667-675. (Pubitemid 34828325)
57. Sonter, M.J. (1997). The technical and economic feasibility of mining the near-Earth asteroids. Acta Astronaut. 41, 637-647. (Pubitemid 127407293)
58. Stanliand, S., Coppock, M., Tuffin, M., van Zyl, L., Roychoudhury, A.N. & Cowan, D. (2010). Cobalt uptake and resistance to trace metals in Comamonas testosteroni isolated from a heavy-metal contaminated site in the Zambian copperbelt. Geomicrobiol. J. 27, 656-668.
59. Steen, B. & Borg, G. (2002). An estimation of the cost of sustainable production of metal concentrates from the Earth's crust. Ecol. Econ. 42, 401-413. (Pubitemid 35180799)
60. Stookey, L.L. (1970). Ferrozine - A new spectrophotometric reagent for iron. Ann. Chem. 42, 779-781.
61. Stott, M.B., Sutton, D.C., Watling, H.R. & Franzmann, P.D. (2003). Comparative leaching of chalcopyrite by selected acidophilic bacteria and archaea. Geomicrobiol. J. 20, 215-230. (Pubitemid 36971739)
62. Templeton, A. & Knowles, E. (2009). Microbial transformations of minerals and metals: recent advances in geomicrobiology derives from synchrotron-based X-ray spectroscopy and X-ray microscopy. Annu. Rev. Earth Planet. Sci. 37, 367-391.
63. Welch, S.A., Taunton, A.E. & Banfield, J.F. (2002). Effect of microorganisms and microbial metabolites on apatite dissolution. Geomicrobiol. J. 19, 343-367.
64. 2 and organic acids. Geochim. Cosmochim. Acta 55, 943-954.
65. 2 consumption capacity of silicates. Geochim. Cosmochim. Acta 70, 858-870. (Pubitemid 43160202)
66. Wu, L., Jacobson, A.D., Chen, H. & Hausner, M. (2007). Characterisation of elemental release during microbe-basalt interactions at T=28 °C. Geochim. Cosmochim. Acta 71, 2224-2239. (Pubitemid 46554939)