메뉴 건너뛰기




Volumn 8, Issue 5, 2010, Pages 446-456

Microarray analysis of a microbe-mineral interaction

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; HEAVY METAL; IRON; SILICATE;

EID: 78349290001     PISSN: 14724677     EISSN: 14724669     Source Type: Journal    
DOI: 10.1111/j.1472-4669.2010.00253.x     Document Type: Article
Times cited : (37)

References (59)
  • 1
    • 34250117946 scopus 로고
    • The repression of siderophore synthesis by Mt. St. Helens' ash and silicate rock standards
    • Akers HA, Magee KP (1985) The repression of siderophore synthesis by Mt. St. Helens' ash and silicate rock standards. Experimenta 41, 1354-1355.
    • (1985) Experimenta , vol.41 , pp. 1354-1355
    • Akers, H.A.1    Magee, K.P.2
  • 3
    • 0344578041 scopus 로고    scopus 로고
    • CzcD is a heavy metal ion transporter involved in regulation of heavy metal resistance in Ralstonia sp. strain CH34
    • Anton A, Grosse C, Reissmann J, Pribyl T, Nies DH (1999) CzcD is a heavy metal ion transporter involved in regulation of heavy metal resistance in Ralstonia sp. strain CH34. Journal of Bacteriology 181, 6876-6881.
    • (1999) Journal of Bacteriology , vol.181 , pp. 6876-6881
    • Anton, A.1    Grosse, C.2    Reissmann, J.3    Pribyl, T.4    Nies, D.H.5
  • 4
    • 4444240265 scopus 로고    scopus 로고
    • Role of micro-organisms in weathering of the Konkan-Goa laterite formations
    • Baskar S, Baskar R, Kaushik A (2003) Role of micro-organisms in weathering of the Konkan-Goa laterite formations. Current Science 85, 1129-1134.
    • (2003) Current Science , vol.85 , pp. 1129-1134
    • Baskar, S.1    Baskar, R.2    Kaushik, A.3
  • 5
    • 0031933445 scopus 로고    scopus 로고
    • An ABC transporter system of Yersinia pestis allows utilization of chelated iron by Escherichia coli SAB11
    • Bearden SW, Staggs TM, Perry RD (1998) An ABC transporter system of Yersinia pestis allows utilization of chelated iron by Escherichia coli SAB11. Journal of Bacteriology 180, 1135-1147.
    • (1998) Journal of Bacteriology , vol.180 , pp. 1135-1147
    • Bearden, S.W.1    Staggs, T.M.2    Perry, R.D.3
  • 6
    • 0033828371 scopus 로고    scopus 로고
    • Metal-ion tolerance in Escherichia coli: analysis of transcriptional profiles by gene-array technology
    • Brocklehurst KR, Morby AP (2000) Metal-ion tolerance in Escherichia coli: analysis of transcriptional profiles by gene-array technology. Microbiology 146, 2277-2282.
    • (2000) Microbiology , vol.146 , pp. 2277-2282
    • Brocklehurst, K.R.1    Morby, A.P.2
  • 9
    • 0003634802 scopus 로고
    • Bioluminescence and Chemiluminescence: Fundamentals and Applied Aspects
    • In, eds, Campbell AK, Kricka LJ, Stanley PE). John Wiley & Sons Chichester, New York/Brisbane/Toronto/Singapore-
    • Corbisier P, Thiry E, Masolijn A, Diels L (1994) Construction and development of metal ion biosensors. In Bioluminescence and Chemiluminescence: Fundamentals and Applied Aspects (eds Campbell AK, Kricka LJ, Stanley PE). John Wiley & Sons Chichester, New York/Brisbane/Toronto/Singapore, pp.151-155.
    • (1994) Construction and development of metal ion biosensors , pp. 151-155
    • Corbisier, P.1    Thiry, E.2    Masolijn, A.3    Diels, L.4
  • 11
    • 30144435485 scopus 로고    scopus 로고
    • The genetics of ATP-binding cassette transporter
    • Dean M (2005) The genetics of ATP-binding cassette transporter. Methods in Enzymology 400, 409-429.
    • (2005) Methods in Enzymology , vol.400 , pp. 409-429
    • Dean, M.1
  • 12
    • 0037788352 scopus 로고    scopus 로고
    • Basalt weathering laws and the impact of basalt weathering on the global carbon cycle
    • Dessert C, Dupre B, Gaillardet J, Francois LM, Allegre CJ (2003) Basalt weathering laws and the impact of basalt weathering on the global carbon cycle. Chemical Geology 202, 257-273.
    • (2003) Chemical Geology , vol.202 , pp. 257-273
    • Dessert, C.1    Dupre, B.2    Gaillardet, J.3    Francois, L.M.4    Allegre, C.J.5
  • 15
    • 0029810992 scopus 로고    scopus 로고
    • Siderophore-mediated iron uptake in Alcaligenes eutrophus CH34 and identification of aleB encoding the ferric iron-alcaligin E receptor
    • Gilis A, Khan MA, Cornelis P, Meyer JM, Mergeay M, Van Der Lelie D (1996) Siderophore-mediated iron uptake in Alcaligenes eutrophus CH34 and identification of aleB encoding the ferric iron-alcaligin E receptor. Journal of Bacteriology 178, 5499-5507.
    • (1996) Journal of Bacteriology , vol.178 , pp. 5499-5507
    • Gilis, A.1    Khan, M.A.2    Cornelis, P.3    Meyer, J.M.4    Mergeay, M.5    Van Der Lelie, D.6
  • 16
    • 34250821713 scopus 로고    scopus 로고
    • Contribution of extracytoplasmic function sigma factors to transition metal homeostasis in Cupriavidus metallidurans strain CH34
    • Grosse C, Friedrich S, Nies DH (2007) Contribution of extracytoplasmic function sigma factors to transition metal homeostasis in Cupriavidus metallidurans strain CH34. Journal of Molecular Microbiology and Biotechnology 12, 227-240.
    • (2007) Journal of Molecular Microbiology and Biotechnology , vol.12 , pp. 227-240
    • Grosse, C.1    Friedrich, S.2    Nies, D.H.3
  • 18
    • 1842533377 scopus 로고    scopus 로고
    • Barite, BIFs and bugs: evidence for the evolution of the Earth's early hydrosphere
    • Huston DL, Logan GA (2004) Barite, BIFs and bugs: evidence for the evolution of the Earth's early hydrosphere. Earth and Planet Science Letters 220, 41-55.
    • (2004) Earth and Planet Science Letters , vol.220 , pp. 41-55
    • Huston, D.L.1    Logan, G.A.2
  • 19
    • 34547865726 scopus 로고    scopus 로고
    • The PilA protein of non-typeable Haemophilus influenzae plays a role in biofilm formation, adherence to epithelial cells and colonization of the mammalian upper respiratory tract
    • Jurcisek JA, Bookwalter JE, Baker BD, Fernandez S, Novotny LA, Munson RS Jr, Bakaletz LO (2007) The PilA protein of non-typeable Haemophilus influenzae plays a role in biofilm formation, adherence to epithelial cells and colonization of the mammalian upper respiratory tract. Molecular Microbiology 65, 1288-1299.
    • (2007) Molecular Microbiology , vol.65 , pp. 1288-1299
    • Jurcisek, J.A.1    Bookwalter, J.E.2    Baker, B.D.3    Fernandez, S.4    Novotny, L.A.5    Munson Jr, R.S.6    Bakaletz, L.O.7
  • 20
    • 0027487221 scopus 로고
    • Characterization of the ferrous iron uptake system of Escherichia coli
    • Kammler M, Schön C, Hantke K (1993) Characterization of the ferrous iron uptake system of Escherichia coli. Journal of Bacteriology 175, 6212-6219.
    • (1993) Journal of Bacteriology , vol.175 , pp. 6212-6219
    • Kammler, M.1    Schön, C.2    Hantke, K.3
  • 22
    • 5044234051 scopus 로고    scopus 로고
    • Behaviour of Li isotopes during continental weathering: the Bidar laterite profile, India
    • Kisakurek B, Widdowson M, James RH (2004) Behaviour of Li isotopes during continental weathering: the Bidar laterite profile, India. Chemical Geology 212, 27-44.
    • (2004) Chemical Geology , vol.212 , pp. 27-44
    • Kisakurek, B.1    Widdowson, M.2    James, R.H.3
  • 23
    • 0343395846 scopus 로고    scopus 로고
    • ABC transporter-mediated uptake of iron, siderophores, heme and vitamin B12
    • Koster W (2001) ABC transporter-mediated uptake of iron, siderophores, heme and vitamin B12. Research in Microbiology 152, 291-301.
    • (2001) Research in Microbiology , vol.152 , pp. 291-301
    • Koster, W.1
  • 24
    • 0004287727 scopus 로고
    • Microbial Geochemistry
    • Blackwell, Oxford, UK.
    • Krumbein WE (1983) Microbial Geochemistry. Blackwell, Oxford, UK.
    • (1983)
    • Krumbein, W.E.1
  • 25
    • 0000920763 scopus 로고
    • Biocorrosion and biodeterioration of antique and medieval glass
    • Krumbein WE, Urzi CE, Gehrmann C (1991) Biocorrosion and biodeterioration of antique and medieval glass. Geomicrobiology Journal 9, 139-160.
    • (1991) Geomicrobiology Journal , vol.9 , pp. 139-160
    • Krumbein, W.E.1    Urzi, C.E.2    Gehrmann, C.3
  • 26
    • 22144471145 scopus 로고    scopus 로고
    • Bacterial resistance to antibiotics: active efflux and reduced uptake
    • Kumar A, Schweizer HP (2005) Bacterial resistance to antibiotics: active efflux and reduced uptake. Advanced Drug Delivery Review 57, 1486-1513.
    • (2005) Advanced Drug Delivery Review , vol.57 , pp. 1486-1513
    • Kumar, A.1    Schweizer, H.P.2
  • 27
    • 13244271944 scopus 로고    scopus 로고
    • Genome-wide transcriptional response of chemostat-cultured Escherichia coli to zinc
    • Lee LJ, Barrett JA, Poole RK (2005) Genome-wide transcriptional response of chemostat-cultured Escherichia coli to zinc. Journal of Bacteriolology 187, 1124-1134.
    • (2005) Journal of Bacteriolology , vol.187 , pp. 1124-1134
    • Lee, L.J.1    Barrett, J.A.2    Poole, R.K.3
  • 29
    • 34547602078 scopus 로고    scopus 로고
    • Riverine erosion rates on Sao Miguel volcanic island, Azores archipelago
    • Louvat P, Allegre CJ (1998) Riverine erosion rates on Sao Miguel volcanic island, Azores archipelago. Chemical Geology 148, 177-200.
    • (1998) Chemical Geology , vol.148 , pp. 177-200
    • Louvat, P.1    Allegre, C.J.2
  • 31
    • 0021925630 scopus 로고
    • Alcaligenes eutrophus CH34 is a facultative chemolithotroph with plasmid-bound resistance to heavy metals
    • Mergeay M, Nies D, Schlegel HG, Gerits J, Charles P, Van Gijsegem F (1985) Alcaligenes eutrophus CH34 is a facultative chemolithotroph with plasmid-bound resistance to heavy metals. Journal of Bacteriology 162, 328-334.
    • (1985) Journal of Bacteriology , vol.162 , pp. 328-334
    • Mergeay, M.1    Nies, D.2    Schlegel, H.G.3    Gerits, J.4    Charles, P.5    Van Gijsegem, F.6
  • 36
    • 0347479229 scopus 로고    scopus 로고
    • Molecular basis of bacterial outer membrane permeability revisited
    • Nikaido H (2003) Molecular basis of bacterial outer membrane permeability revisited. Microbiology and Molecular Biology Review 67, 593-656.
    • (2003) Microbiology and Molecular Biology Review , vol.67 , pp. 593-656
    • Nikaido, H.1
  • 37
    • 0018967975 scopus 로고
    • Sodium ion-substrate symport in a marine bacterium
    • Niven DF, MacLeod RA (1980) Sodium ion-substrate symport in a marine bacterium. Journal of Bacteriology 142, 603-607.
    • (1980) Journal of Bacteriology , vol.142 , pp. 603-607
    • Niven, D.F.1    MacLeod, R.A.2
  • 38
    • 0028287443 scopus 로고
    • Detection, isolation, and characterization of siderophores
    • Payne SM (1994) Detection, isolation, and characterization of siderophores. Methods in Enzymology 235, 329-344.
    • (1994) Methods in Enzymology , vol.235 , pp. 329-344
    • Payne, S.M.1
  • 39
    • 0003962854 scopus 로고
    • Principles of Microbe and Cell Cultivation
    • Blackwell, Oxford, UK.
    • Pirt SJ (1975) Principles of Microbe and Cell Cultivation. Blackwell, Oxford, UK.
    • (1975)
    • Pirt, S.J.1
  • 41
    • 19744370053 scopus 로고    scopus 로고
    • Fe analysis by the ferrozine method: adaptation to FIA towards in situ analysis in hydrothermal environment
    • Sarradin PM, Le Bris N, Le Gall C, Rodier P (2005) Fe analysis by the ferrozine method: adaptation to FIA towards in situ analysis in hydrothermal environment. Talanta 66, 1131-1138.
    • (2005) Talanta , vol.66 , pp. 1131-1138
    • Sarradin, P.M.1    Le Bris, N.2    Le Gall, C.3    Rodier, P.4
  • 42
    • 11144301814 scopus 로고    scopus 로고
    • Occurrence of hydrogen-oxidizing Ralstonia species as primary microorganisms in the Mt. Pinatubo volcanic mudflow deposits
    • Sato Y, Nishihara H, Yoshida M, Watanabe M, Rondal JD, Ohta H (2004) Occurrence of hydrogen-oxidizing Ralstonia species as primary microorganisms in the Mt. Pinatubo volcanic mudflow deposits. Soil Science and Plant Nutrition 50, 855-861.
    • (2004) Soil Science and Plant Nutrition , vol.50 , pp. 855-861
    • Sato, Y.1    Nishihara, H.2    Yoshida, M.3    Watanabe, M.4    Rondal, J.D.5    Ohta, H.6
  • 43
    • 0023127806 scopus 로고
    • Universal chemical-assay for the detection and determination of siderophores
    • Schwyn B, Neilands JB (1987) Universal chemical-assay for the detection and determination of siderophores. Analytical Biochemistry 160, 47-56.
    • (1987) Analytical Biochemistry , vol.160 , pp. 47-56
    • Schwyn, B.1    Neilands, J.B.2
  • 44
    • 0005840436 scopus 로고
    • Biogeochemical Cycling of Mineral-forming Elements: Studies in Environmental Sciences 3
    • In, eds, Trudinger PA, Swaine DJ). Elsevier, Amsterdam
    • Silverman MP (1979) Biological and organic chemical decomposition of silicates. In Biogeochemical Cycling of Mineral-forming Elements: Studies in Environmental Sciences 3 (eds Trudinger PA, Swaine DJ). Elsevier, Amsterdam, pp. 445-467.
    • (1979) Biological and organic chemical decomposition of silicates , pp. 445-467
    • Silverman, M.P.1
  • 45
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Article 3, doi:.
    • Smyth GK (2004) Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Statistical Applications of Genetic Molecular Biology 3, Article 3, doi:.
    • (2004) Statistical Applications of Genetic Molecular Biology , vol.3
    • Smyth, G.K.1
  • 46
    • 0242333835 scopus 로고    scopus 로고
    • Normalization of cDNA microarray data
    • Smyth GK, Speed T (2003) Normalization of cDNA microarray data. Methods 31, 265-273.
    • (2003) Methods , vol.31 , pp. 265-273
    • Smyth, G.K.1    Speed, T.2
  • 47
    • 18744369640 scopus 로고    scopus 로고
    • Use of within-array replicate spots for assessing differential expression in microarray experiments
    • Smyth GK, Michaud J, Scott HS (2005) Use of within-array replicate spots for assessing differential expression in microarray experiments. Bioinformatics 21, 2067-2075.
    • (2005) Bioinformatics , vol.21 , pp. 2067-2075
    • Smyth, G.K.1    Michaud, J.2    Scott, H.S.3
  • 49
    • 33749525484 scopus 로고    scopus 로고
    • Microbes and volcanoes: a tale from the oceans, ophiolites, and greenstone belts
    • Staudigel H, Furnes H, Banerjee NR, Dilek Y, Muehlenbachs K (2006) Microbes and volcanoes: a tale from the oceans, ophiolites, and greenstone belts. GSA Today 16, 4-102.
    • (2006) GSA Today , vol.16 , pp. 4-102
    • Staudigel, H.1    Furnes, H.2    Banerjee, N.R.3    Dilek, Y.4    Muehlenbachs, K.5
  • 50
    • 33847670407 scopus 로고
    • Ferrozine - a new spectrophotometric reagent for iron
    • Stookey LL (1970) Ferrozine - a new spectrophotometric reagent for iron. Analysis of Chemistry 42, 779-781.
    • (1970) Analysis of Chemistry , vol.42 , pp. 779-781
    • Stookey, L.L.1
  • 51
    • 0141953988 scopus 로고    scopus 로고
    • Microbial alteration of 0-30-Ma seafloor and sub-seafloor basaltic glasses from the Australian Antarctic Discordance
    • Thorseth IH, Pedersen RB, Christie DM (2003) Microbial alteration of 0-30-Ma seafloor and sub-seafloor basaltic glasses from the Australian Antarctic Discordance. Earth and Planet Science Letters 215, 237-247.
    • (2003) Earth and Planet Science Letters , vol.215 , pp. 237-247
    • Thorseth, I.H.1    Pedersen, R.B.2    Christie, D.M.3
  • 52
    • 0033950956 scopus 로고    scopus 로고
    • Regulation of the cnr cobalt and nickel resistance determinant of Ralstonia eutropha (Alcaligenes eutrophus) CH34
    • Tibazarwa C, Wuertz S, Mergeay M, Wyns L, Van Der Lelie D (2000) Regulation of the cnr cobalt and nickel resistance determinant of Ralstonia eutropha (Alcaligenes eutrophus) CH34. Journal Bacteriology 182, 1399-1409.
    • (2000) Journal Bacteriology , vol.182 , pp. 1399-1409
    • Tibazarwa, C.1    Wuertz, S.2    Mergeay, M.3    Wyns, L.4    Van Der Lelie, D.5
  • 54
    • 20444428661 scopus 로고    scopus 로고
    • Role of bacterial cell surface structures in Escherichia coli biofilm formation
    • Van Houdt R, Michiels CW (2005) Role of bacterial cell surface structures in Escherichia coli biofilm formation. Research in Microbiology 156, 626-633.
    • (2005) Research in Microbiology , vol.156 , pp. 626-633
    • Van Houdt, R.1    Michiels, C.W.2
  • 55
    • 4043131910 scopus 로고    scopus 로고
    • Geochemistry of metabasalts and hydrothermal alteration zones associated with c. 3.45 Ga chert and barite deposits: implications for the geological setting of the Warrawoona Group, Pilbara Craton, Australia
    • Van Kranendonk MJ, Pirajno F (2004) Geochemistry of metabasalts and hydrothermal alteration zones associated with c. 3.45 Ga chert and barite deposits: implications for the geological setting of the Warrawoona Group, Pilbara Craton, Australia. Geochemistry: Exploration, Environment, Analysis 4, 253-278.
    • (2004) Geochemistry: Exploration, Environment, Analysis , vol.4 , pp. 253-278
    • Van Kranendonk, M.J.1    Pirajno, F.2
  • 59
    • 0033068019 scopus 로고    scopus 로고
    • Salmonella typhimurium encodes a putative iron transport system within the centisome 63 pathogenicity island
    • Zhou D, Hardt W, Galán JE (1999) Salmonella typhimurium encodes a putative iron transport system within the centisome 63 pathogenicity island. Infection and Immunity 67, 1974-1981.
    • (1999) Infection and Immunity , vol.67 , pp. 1974-1981
    • Zhou, D.1    Hardt, W.2    Galán, J.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.