Interactome of the plant-specific ESCRT-III component AtVPS2.2 in Arabidopsis thaliana

Journal of Proteome Research

Volumn 11, Issue 1, 2012, Pages 397-411

  Ibl, Verena ^a   Csaszar, Edina ^b   Schlager, Nicole ^a   Neubert, Susanne ^a   Spitzer, Christoph ^a,c   Hauser, Marie Theres ^a  

^a UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES   (Austria)

^b MAX F PERUTZ LABORATORIES   (Austria)

^c UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

AtVPS2.2; bimolecular fluorescence complementation; coimmunioprecipitation; dynamins; ESCRT III; GFP tagged; in vivo; LC MS MS; yeast two hybrid

Indexed keywords

DYNAMIN; ESCRT III PROTEIN; ESCRT PROTEIN; MEMBRANE PROTEIN; UNCLASSIFIED DRUG; VEGETABLE PROTEIN;

ARABIDOPSIS; ARTICLE; CONTROLLED STUDY; IMMUNOPRECIPITATION; IN VIVO STUDY; LIQUID CHROMATOGRAPHY; NONHUMAN; PLANT ROOT; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN TARGETING; PROTEOMICS; TANDEM MASS SPECTROMETRY;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; CELL MEMBRANE STRUCTURES; CELL NUCLEUS; DYNAMINS; ENDOSOMAL SORTING COMPLEXES REQUIRED FOR TRANSPORT; GREEN FLUORESCENT PROTEINS; IMMUNOPRECIPITATION; PHOSPHOLIPASE D; PLANT ROOTS; PROTEIN BINDING; PROTEIN TRANSPORT; PROTEOME; RECOMBINANT FUSION PROTEINS; TWO-HYBRID SYSTEM TECHNIQUES; VESICULAR TRANSPORT PROTEINS;

ARABIDOPSIS THALIANA;

EID: 84855544418     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr200845n     Document Type: Article

References (99)

1. Gruenberg, J.; Stenmark, H. The biogenesis of multivesicular endosomes Nat. Rev. Mol. Cell. Biol. 2004, 5 (4) 317-23 (Pubitemid 38480612)
2. Russell, M. R.; Nickerson, D. P.; Odorizzi, G. Molecular mechanisms of late endosome morphology, identity and sorting Curr. Opin. Cell. Biol. 2006, 18 (4) 422-8 (Pubitemid 44040964)
3. Katzmann, D. J.; Odorizzi, G.; Emr, S. D. Receptor downregulation and multivesicular-body sorting Nat. Rev. Mol. Cell. Biol. 2002, 3 (12) 893-905 (Pubitemid 35477368)
4. Piper, R. C.; Katzmann, D. J. Biogenesis and function of multivesicular bodies Annu. Rev. Cell Dev. Biol. 2007, 23, 519-47
5. de Gassart, A.; Geminard, C.; Hoekstra, D.; Vidal, M. Exosome secretion: the art of reutilizing nonrecycled proteins? Traffic 2004, 5 (11) 896-903 (Pubitemid 39433559)
6. Fevrier, B.; Raposo, G. Exosomes: endosomal-derived vesicles shipping extracellular messages Curr. Opin. Cell Biol. 2004, 16 (4) 415-21 (Pubitemid 38903148)
7. Lee, Y. S.; Pressman, S.; Andress, A. P.; Kim, K.; White, J. L.; Cassidy, J. J.; Li, X.; Lubell, K.; Lim do, H.; Cho, I. S.; Nakahara, K.; Preall, J. B.; Bellare, P.; Sontheimer, E. J.; Carthew, R. W. Silencing by small RNAs is linked to endosomal trafficking Nat. Cell Biol. 2009, 11 (9) 1150-6
8. Gibbings, D. J.; Ciaudo, C.; Erhardt, M.; Voinnet, O. Multivesicular bodies associate with components of miRNA effector complexes and modulate miRNA activity Nat. Cell Biol. 2009, 11 (9) 1143-9
9. Hurley, J. H.; Hanson, P. I. Membrane budding and scission by the ESCRT machinery: it's all in the neck Nat. Rev. Mol. Cell. Biol. 2010, 11 (8) 556-66
10. Peel, S.; Macheboeuf, P.; Martinelli, N.; Weissenhorn, W. Divergent pathways lead to ESCRT-III-catalyzed membrane fission Trends Biochem. Sci. 2011, 36 (4) 199-210
11. Rusten, T. E.; Stenmark, H. How do ESCRT proteins control autophagy? J. Cell Sci. 2009, 122 (Pt 13) 2179-83
12. Wollert, T.; Hurley, J. H. Molecular mechanism of multivesicular body biogenesis by ESCRT complexes Nature 2010, 464 (7290) 864-9
13. Shahriari, M.; Keshavaiah, C.; Scheuring, D.; Sabovljevic, A.; Pimpl, P.; Hausler, R. E.; Hulskamp, M.; Schellmann, S. The AAA-type ATPase AtSKD1 contributes to vacuolar maintenance of Arabidopsis thaliana Plant J. 2011, 64 (1) 71-85
14. Barajas, D.; Jiang, Y.; Nagy, P. D. A unique role for the host ESCRT proteins in replication of Tomato bushy stunt virus PLoS Pathog. 2009, 5 (12) e1000705
15. Lindas, A. C.; Karlsson, E. A.; Lindgren, M. T.; Ettema, T. J.; Bernander, R. A unique cell division machinery in the Archaea Proc. Natl. Acad. Sci. U.S.A. 2008, 105 (48) 18942-6
16. Ellen, A. F.; Albers, S. V.; Huibers, W.; Pitcher, A.; Hobel, C. F.; Schwarz, H.; Folea, M.; Schouten, S.; Boekema, E. J.; Poolman, B.; Driessen, A. J. Proteomic analysis of secreted membrane vesicles of archaeal Sulfolobus species reveals the presence of endosome sorting complex components Extremophiles 2009, 13 (1) 67-79
17. Stauffer, D. R.; Howard, T. L.; Nyun, T.; Hollenberg, S. M. CHMP1 is a novel nuclear matrix protein affecting chromatin structure and cell-cycle progression J. Cell Sci. 2001, 114 (Pt 13) 2383-93 (Pubitemid 32684794)
18. Muziol, T.; Pineda-Molina, E.; Ravelli, R. B.; Zamborlini, A.; Usami, Y.; Gottlinger, H.; Weissenhorn, W. Structural basis for budding by the ESCRT-III factor CHMP3 Dev. Cell 2006, 10 (6) 821-30 (Pubitemid 43779119)
19. Bajorek, M.; Schubert, H. L.; McCullough, J.; Langelier, C.; Eckert, D. M.; Stubblefield, W. M.; Uter, N. T.; Myszka, D. G.; Hill, C. P.; Sundquist, W. I. Structural basis for ESCRT-III protein autoinhibition Nat. Struct. Mol. Biol. 2009, 16 (7) 754-62
20. Xiao, J.; Chen, X. W.; Davies, B. A.; Saltiel, A. R.; Katzmann, D. J.; Xu, Z. Structural basis of Ist1 function and Ist1-Did2 interaction in the multivesicular body pathway and cytokinesis Mol. Biol. Cell 2009, 20 (15) 3514-24
21. Teis, D.; Saksena, S.; Emr, S. D. Ordered assembly of the ESCRT-III complex on endosomes is required to sequester cargo during MVB formation Dev. Cell 2008, 15 (4) 578-89
22. Wollert, T.; Wunder, C.; Lippincott-Schwartz, J.; Hurley, J. H. Membrane scission by the ESCRT-III complex Nature 2009, 458 (7235) 172-7
23. Ghazi-Tabatabai, S.; Obita, T.; Pobbati, A. V.; Perisic, O.; Samson, R. Y.; Bell, S. D.; Williams, R. L. Evolution and assembly of ESCRTs Biochem. Soc. Trans. 2009, 37 (Pt 1) 151-5
24. Lata, S.; Schoehn, G.; Solomons, J.; Pires, R.; Gottlinger, H. G.; Weissenhorn, W. Structure and function of ESCRT-III Biochem. Soc. Trans. 2009, 37 (Pt 1) 156-60
25. Saksena, S.; Wahlman, J.; Teis, D.; Johnson, A. E.; Emr, S. D. Functional reconstitution of ESCRT-III assembly and disassembly Cell 2009, 136 (1) 97-109
26. Merrill, S. A.; Hanson, P. I. Activation of Human VPS4A by ESCRT-III Proteins Reveals Ability of Substrates to Relieve Enzyme Autoinhibition J. Biol. Chem. 2010, 285 (46) 35428-38
27. Winter, V.; Hauser, M. T. Exploring the ESCRTing machinery in eukaryotes Trends Plant Sci. 2006, 11 (3) 115-23 (Pubitemid 43376141)
28. Haas, T. J.; Sliwinski, M. K.; Martinez, D. E.; Preuss, M.; Ebine, K.; Ueda, T.; Nielsen, E.; Odorizzi, G.; Otegui, M. S. The Arabidopsis AAA ATPase SKD1 is involved in multivesicular endosome function and interacts with its positive regulator LYST-INTERACTING PROTEIN5 Plant Cell 2007, 19 (4) 1295-312 (Pubitemid 46941655)
29. Spitzer, C.; Reyes, F. C.; Buono, R.; Sliwinski, M. K.; Haas, T. J.; Otegui, M. S. The ESCRT-related CHMP1A and B proteins mediate multivesicular body sorting of auxin carriers in Arabidopsis and are required for plant development Plant Cell 2009, 21 (3) 749-66
30. Katsiarimpa, A.; Anzenberger, F.; Schlager, N.; Neubert, S.; Hauser, M.-T.; Schwechheimer, C.; Isono, E. The Arabidopsis Deubiquitinating Enzyme AMSH3 Interacts with ESCRT-III Subunits and Regulates Their Localization Plant Cell 2011, 23 (8) 3025-40
31. Obita, T.; Saksena, S.; Ghazi-Tabatabai, S.; Gill, D. J.; Perisic, O.; Emr, S. D.; Williams, R. L. Structural basis for selective recognition of ESCRT-III by the AAA ATPase Vps4 Nature 2007, 449 (7163) 735-9 (Pubitemid 47552090)
32. Kozlov, M. M.; McMahon, H. T.; Chernomordik, L. V. Protein-driven membrane stresses in fusion and fission Trends Biochem. Sci. 2010, 35 (12) 699-706
33. Field, M. C.; Sali, A.; Rout, M. P. On a bender-BARs, ESCRTs, COPs, and finally getting your coat J. Cell Biol. 2011, 193 (6) 963-72
34. Stuchell-Brereton, M. D.; Skalicky, J. J.; Kieffer, C.; Karren, M. A.; Ghaffarian, S.; Sundquist, W. I. ESCRT-III recognition by VPS4 ATPases Nature 2007, 449 (7163) 740-4 (Pubitemid 47552091)
35. Yorikawa, C.; Takaya, E.; Osako, Y.; Tanaka, R.; Terasawa, Y.; Hamakubo, T.; Mochizuki, Y.; Iwanari, H.; Kodama, T.; Maeda, T.; Hitomi, K.; Shibata, H.; Maki, M. Human Calpain 7/PalBH Associates with a Subset of ESCRT-III-related Proteins in its N-terminal Region and Partly Localizes to Endocytic Membrane Compartments J. Biochem. 2008, 143 (6) 731-45 (Pubitemid 351918939)
36. Yang, D.; Rismanchi, N.; Renvoise, B.; Lippincott-Schwartz, J.; Blackstone, C.; Hurley, J. H. Structural basis for midbody targeting of spastin by the ESCRT-III protein CHMP1B Nat. Struct. Mol. Biol. 2008, 15 (12) 1278-86
37. Rue, S. M.; Mattei, S.; Saksena, S.; Emr, S. D. Novel Ist1-Did2 Complex Functions at a Late Step in Multivesicular Body Sorting Mol. Biol. Cell 2008, 19 (2) 475-84 (Pubitemid 351272137)
38. Praefcke, G. J.; McMahon, H. T. The dynamin superfamily: universal membrane tubulation and fission molecules? Nat. Rev. Mol. Cell. Biol. 2004, 5 (2) 133-47 (Pubitemid 38160256)
39. Müller, S.; Fuchs, E.; Ovecka, M.; Wysocka-Diller, J.; Benfey, P. N.; Hauser, M. T. Two new loci, PLEIADE and HYADE, implicate organ-specific regulation of cytokinesis in Arabidopsis Plant Physiol. 2002, 130 (1) 312-24
40. Hauser, M. T.; Morikami, A.; Benfey, P. N. Conditional root expansion mutants of Arabidopsis Development 1995, 121 (4) 1237-52
41. Clough, S. J.; Bent, A. F. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana Plant J. 1998, 16 (6) 735-43
42. Menges, M.; Hennig, L.; Gruissem, W.; Murray, J. A. Cell cycle-regulated gene expression in Arabidopsis J. Biol. Chem. 2002, 277 (44) 41987-2002 (Pubitemid 35257513)
43. Sheen, J. Signal transduction in maize and Arabidopsis mesophyll protoplasts Plant Physiol. 2001, 127 (4) 1466-75 (Pubitemid 34050015)
44. Hauser, M. T.; Adhami, F.; Dorner, M.; Fuchs, E.; Glossl, J. Generation of co-dominant PCR-based markers by duplex analysis on high resolution gels Plant J. 1998, 16 (1) 117-25
45. Mortz, E.; Krogh, T. N.; Vorum, H.; Gorg, A. Improved silver staining protocols for high sensitivity protein identification using matrix-assisted laser desorption/ionization-time of flight analysis Proteomics 2001, 1 (11) 1359-63 (Pubitemid 33587891)
46. Karsai, A.; Müller, S.; Platz, S.; Hauser, M. T. Evaluation of a homemade SYBR green I reaction mixture for real-time PCR quantification of gene expression Biotechniques 2002, 32 (4) 790-2
47. 794-6.
48. Ito, T.; Kuwahara, S.; Yokota, T. Automatic and manual latex agglutination tests for measurement of cholera toxin and heat-labile enterotoxin of Escherichia coli J Clin Microbiol 1983, 17 (1) 7-12 (Pubitemid 13211568)
49. Walter, M.; Chaban, C.; Schutze, K.; Batistic, O.; Weckermann, K.; Nake, C.; Blazevic, D.; Grefen, C.; Schumacher, K.; Oecking, C.; Harter, K.; Kudla, J. Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation Plant J 2004, 40 (3) 428-38 (Pubitemid 39415624)
50. Oliveros, J. C. VENNY: An interactive tool for comparing lists with Venn Diagrams; http://bioinfogp.cnb.csic.es/tools/venny/index.html.
51. Hanson, P. I.; Roth, R.; Lin, Y.; Heuser, J. E. Plasma membrane deformation by circular arrays of ESCRT-III protein filaments J. Cell Biol. 2008, 180 (2) 389-402 (Pubitemid 351185923)
52. von Schwedler, U. K.; Stuchell, M.; Muller, B.; Ward, D. M.; Chung, H. Y.; Morita, E.; Wang, H. E.; Davis, T.; He, G. P.; Cimbora, D. M.; Scott, A.; Krausslich, H. G.; Kaplan, J.; Morham, S. G.; Sundquist, W. I. The protein network of HIV budding Cell 2003, 114 (6) 701-13 (Pubitemid 37203363)
53. Strack, B.; Calistri, A.; Craig, S.; Popova, E.; Gottlinger, H. G. AIP1/ALIX is a binding partner for HIV-1 p6 and EIAV p9 functioning in virus budding Cell 2003, 114 (6) 689-99 (Pubitemid 37186765)
54. Shim, S.; Kimpler, L. A.; Hanson, P. I. Structure/function analysis of four core ESCRT-III proteins reveals common regulatory role for extreme C-terminal domain Traffic 2007, 8 (8) 1068-79 (Pubitemid 47074039)
55. Howard, T. L.; Stauffer, D. R.; Degnin, C. R.; Hollenberg, S. M. CHMP1 functions as a member of a newly defined family of vesicle trafficking proteins J. Cell Sci. 2001, 114 (Pt 13) 2395-404 (Pubitemid 32684795)
56. Leung, K. F.; Dacks, J. B.; Field, M. C. Evolution of the multivesicular body ESCRT machinery; retention across the eukaryotic lineage Traffic 2008, 9 (10) 1698-716
57. Giavalisco, P.; Kapitza, K.; Kolasa, A.; Buhtz, A.; Kehr, J. Towards the proteome of Brassica napus phloem sap Proteomics 2006, 6 (3) 896-909 (Pubitemid 43260214)
58. Carter, C.; Pan, S.; Zouhar, J.; Avila, E. L.; Girke, T.; Raikhel, N. V. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins Plant Cell 2004, 16 (12) 3285-303 (Pubitemid 41096007)
59. Schmidt, U. G.; Endler, A.; Schelbert, S.; Brunner, A.; Schnell, M.; Neuhaus, H. E.; Marty-Mazars, D.; Marty, F.; Baginsky, S.; Martinoia, E. Novel tonoplast transporters identified using a proteomic approach with vacuoles isolated from cauliflower buds Plant Physiol. 2007, 145 (1) 216-29 (Pubitemid 47416495)
60. Jaquinod, M.; Villiers, F.; Kieffer-Jaquinod, S.; Hugouvieux, V.; Bruley, C.; Garin, J.; Bourguignon, J. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture Mol. Cell. Proteomics 2007, 6 (3) 394-412 (Pubitemid 46561913)
61. Marmagne, A.; Ferro, M.; Meinnel, T.; Bruley, C.; Kuhn, L.; Garin, J.; Barbier-Brygoo, H.; Ephritikhine, G. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome Mol. Cell. Proteomics 2007, 6 (11) 1980-96 (Pubitemid 350201872)
62. Dunkley, T. P.; Hester, S.; Shadforth, I. P.; Runions, J.; Weimar, T.; Hanton, S. L.; Griffin, J. L.; Bessant, C.; Brandizzi, F.; Hawes, C.; Watson, R. B.; Dupree, P.; Lilley, K. S. Mapping the Arabidopsis organelle proteome Proc. Natl. Acad. Sci. U.S.A. 2006, 103 (17) 6518-23
63. Mitra, S. K.; Gantt, J. A.; Ruby, J. F.; Clouse, S. D.; Goshe, M. B. Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques J Proteome Res 2007, 6 (5) 1933-50 (Pubitemid 46814515)
64. Benschop, J. J.; Mohammed, S.; O'Flaherty, M.; Heck, A. J.; Slijper, M.; Menke, F. L. Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis Mol. Cell. Proteomics 2007, 6 (7) 1198-214 (Pubitemid 47099230)
65. Nuhse, T. S.; Stensballe, A.; Jensen, O. N.; Peck, S. C. Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database Plant Cell 2004, 16 (9) 2394-405 (Pubitemid 39247080)
66. Sugiyama, N.; Nakagami, H.; Mochida, K.; Daudi, A.; Tomita, M.; Shirasu, K.; Ishihama, Y. Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis Mol. Syst. Biol. 2008, 4, 193
67. Lee, C. S.; Kim, I. S.; Park, J. B.; Lee, M. N.; Lee, H. Y.; Suh, P. G.; Ryu, S. H. The phox homology domain of phospholipase D activates dynamin GTPase activity and accelerates EGFR endocytosis Nat. Cell Biol. 2006, 8 (5) 477-84
68. Jenkins, G. M.; Frohman, M. A. Phospholipase D: a lipid centric review Cell. Mol. Life Sci. 2005, 62 (19-20) 2305-16 (Pubitemid 41500546)
69. Haucke, V.; Di Paolo, G. Lipids and lipid modifications in the regulation of membrane traffic Curr. Opin. Cell Biol. 2007, 19 (4) 426-35 (Pubitemid 47268765)
70. Donaldson, J. G. Phospholipase D in endocytosis and endosomal recycling pathways Biochim. Biophys. Acta 2009, 1791 (9) 845-9
71. LaLonde, M.; Janssens, H.; Yun, S.; Crosby, J.; Redina, O.; Olive, V.; Altshuller, Y. M.; Choi, S. Y.; Du, G.; Gergen, J. P.; Frohman, M. A. A role for Phospholipase D in Drosophila embryonic cellularization BMC Dev. Biol. 2006, 6, 60
72. Vitale, N.; Caumont, A. S.; Chasserot-Golaz, S.; Du, G.; Wu, S.; Sciorra, V. A.; Morris, A. J.; Frohman, M. A.; Bader, M. F. Phospholipase D1: a key factor for the exocytotic machinery in neuroendocrine cells EMBO J. 2001, 20 (10) 2424-34 (Pubitemid 32452860)
73. Huang, P.; Altshuller, Y. M.; Hou, J. C.; Pessin, J. E.; Frohman, M. A. Insulin-stimulated plasma membrane fusion of Glut4 glucose transporter- containing vesicles is regulated by phospholipase D1 Mol. Biol. Cell 2005, 16 (6) 2614-23 (Pubitemid 40741210)
74. Kooijman, E. E.; Chupin, V.; Fuller, N. L.; Kozlov, M. M.; de Kruijff, B.; Burger, K. N.; Rand, P. R. Spontaneous curvature of phosphatidic acid and lysophosphatidic acid Biochemistry 2005, 44 (6) 2097-102 (Pubitemid 40223637)
75. Verkleij, A. J.; De Maagd, R.; Leunissen-Bijvelt, J.; De Kruijff, B. Divalent cations and chlorpromazine can induce non-bilayer structures in phosphatidic acid-containing model membranes Biochim. Biophys. Acta 1982, 684 (2) 255-62 (Pubitemid 12144158)
76. McLaughlin, S. The electrostatic properties of membranes Annu. Rev. Biophys. Biophys. Chem. 1989, 18, 113-36
77. Murray, D.; Arbuzova, A.; Hangyas-Mihalyne, G.; Gambhir, A.; Ben-Tal, N.; Honig, B.; McLaughlin, S. Electrostatic properties of membranes containing acidic lipids and adsorbed basic peptides: theory and experiment Biophys. J. 1999, 77 (6) 3176-88
78. Whitley, P.; Reaves, B. J.; Hashimoto, M.; Riley, A. M.; Potter, B. V.; Holman, G. D. Identification of mammalian Vps24p as an effector of phosphatidylinositol 3,5-bisphosphate-dependent endosome compartmentalization J. Biol. Chem. 2003, 278 (40) 38786-95 (Pubitemid 37221778)
79. Fan, L.; Zheng, S.; Cui, D.; Wang, X. Subcellular distribution and tissue expression of phospholipase Dalpha, Dbeta, and Dgamma in Arabidopsis Plant Physiol. 1999, 119 (4) 1371-8 (Pubitemid 29388232)
80. Bashkirov, P. V.; Akimov, S. A.; Evseev, A. I.; Schmid, S. L.; Zimmerberg, J.; Frolov, V. A. GTPase cycle of dynamin is coupled to membrane squeeze and release, leading to spontaneous fission Cell 2008, 135 (7) 1276-86
81. Pendle, A. F.; Clark, G. P.; Boon, R.; Lewandowska, D.; Lam, Y. W.; Andersen, J.; Mann, M.; Lamond, A. I.; Brown, J. W.; Shaw, P. J. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions Mol. Biol. Cell 2005, 16 (1) 260-9 (Pubitemid 40024308)
82. Bae, M. S.; Cho, E. J.; Choi, E. Y.; Park, O. K. Analysis of the Arabidopsis nuclear proteome and its response to cold stress Plant J. 2003, 36 (5) 652-63 (Pubitemid 37496493)
83. Keesee, S. K.; Obar, R.; Wu, Y.-J. Materials and methods for detection of breast cancer. US-Patent 1999, US005914238A.
84. Hodges, E.; Redelius, J. S.; Wu, W.; Hoog, C. Accelerated discovery of novel protein function in cultured human cells Mol. Cell. Proteomics 2005, 4 (9) 1319-27 (Pubitemid 41448719)
85. Bayer, E. M.; Bottrill, A. R.; Walshaw, J.; Vigouroux, M.; Naldrett, M. J.; Thomas, C. L.; Maule, A. J. Arabidopsis cell wall proteome defined using multidimensional protein identification technology Proteomics 2006, 6 (1) 301-11 (Pubitemid 43142954)
86. Bindschedler, L. V.; Palmblad, M.; Cramer, R. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study Phytochemistry 2008, 69 (10) 1962-72
87. Keller, S.; Sanderson, M. P.; Stoeck, A.; Altevogt, P. Exosomes: from biogenesis and secretion to biological function Immunol. Lett. 2006, 107 (2) 102-8 (Pubitemid 44779821)
88. Simons, M.; Raposo, G. Exosomes - vesicular carriers for intercellular communication Curr. Opin. Cell Biol. 2009, 21 (4) 575-81
89. Valadi, H.; Ekstrom, K.; Bossios, A.; Sjostrand, M.; Lee, J. J.; Lotvall, J. O. Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells Nat. Cell Biol. 2007, 9 (6) 654-9 (Pubitemid 47214727)
90. Mathivanan, S.; Ji, H.; Simpson, R. J. Exosomes: extracellular organelles important in intercellular communication J. Proteomics 2010, 73 (10) 1907-20
91. Mathivanan, S.; Simpson, R. J. ExoCarta: A compendium of exosomal proteins and RNA Proteomics 2009, 9 (21) 4997-5000
92. Regente, M.; Corti-Monzon, G.; Maldonado, A. M.; Pinedo, M.; Jorrin, J.; de la Canal, L. Vesicular fractions of sunflower apoplastic fluids are associated with potential exosome marker proteins FEBS Lett. 2009, 583 (20) 3363-6
93. An, Q.; van Bel, A. J.; Huckelhoven, R. Do plant cells secrete exosomes derived from multivesicular bodies? Plant Signal. Behav. 2007, 2 (1) 4-7 (Pubitemid 351267586)
94. An, Q.; Huckelhoven, R.; Kogel, K. H.; van Bel, A. J. Multivesicular bodies participate in a cell wall-associated defence response in barley leaves attacked by the pathogenic powdery mildew fungus Cell Microbiol. 2006, 8 (6) 1009-19 (Pubitemid 43675331)
95. Barr, F. A.; Shorter, J. Membrane traffic: do cones mark sites of fission? Curr. Biol. 2000, 10 (4) R141-4
96. Lata, S.; Schoehn, G.; Jain, A.; Pires, R.; Piehler, J.; Gottlinger, H. G.; Weissenhorn, W. Helical structures of ESCRT-III are disassembled by VPS4 Science 2008, 321 (5894) 1354-7
97. Fabrikant, G.; Lata, S.; Riches, J. D.; Briggs, J. A.; Weissenhorn, W.; Kozlov, M. M. Computational model of membrane fission catalyzed by ESCRT-III PLoS Comput. Biol. 2009, 5 (11) e1000575
98. Pucadyil, T. J.; Schmid, S. L. Real-time visualization of dynamin-catalyzed membrane fission and vesicle release Cell 2008, 135 (7) 1263-75
99. Sever, S.; Damke, H.; Schmid, S. L. Dynamin:GTP controls the formation of constricted coated pits, the rate limiting step in clathrin-mediated endocytosis J. Cell Biol. 2000, 150 (5) 1137-48