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Volumn 16, Issue 1, 1998, Pages 117-125

Generation of co-dominant PCR-based markers by duplex analysis on high resolution gels

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARABIDOPSIS; CHROMOSOME WALKING; GEL; GENE LOCUS; GENE MAPPING; GENETIC MARKER; GENETIC POLYMORPHISM; MUTATION; PLANT GENETICS; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS;

EID: 0032190558     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.1998.00271.x     Document Type: Article
Times cited : (42)

References (42)
  • 1
    • 0030925951 scopus 로고    scopus 로고
    • Detection of somatic mutations in the mitochondrial DNA control region of colorectal and gastric tumors by heteroduplex and single-strand conformation analysis
    • Alonso, A., Martin, P., Albarran, C., Aquilera, B., Garcia, O., Guzman, A., Oliva, H. and Sancho, M. (1997) Detection of somatic mutations in the mitochondrial DNA control region of colorectal and gastric tumors by heteroduplex and single-strand conformation analysis. Electrophoresis, 18, 682-685.
    • (1997) Electrophoresis , vol.18 , pp. 682-685
    • Alonso, A.1    Martin, P.2    Albarran, C.3    Aquilera, B.4    Garcia, O.5    Guzman, A.6    Oliva, H.7    Sancho, M.8
  • 2
    • 7144259092 scopus 로고    scopus 로고
    • Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population
    • Alonso-Blanco, C., Peeters, A.J.M., Koornneef, M., Lister, C., Dean, C., van den Bosch, N., Pot, J. and Kuiper, M.T.R. (1998) Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population. Plant J. 14, 259-271.
    • (1998) Plant J. , vol.14 , pp. 259-271
    • Alonso-Blanco, C.1    Peeters, A.J.M.2    Koornneef, M.3    Lister, C.4    Dean, C.5    Van den Bosch, N.6    Pot, J.7    Kuiper, M.T.R.8
  • 3
    • 0030925278 scopus 로고    scopus 로고
    • Genetic diversity of feline immunodeficiency virus: Dual infection, recombination, and distinct evolutionary rates among envelope sequence clades
    • Bachmann, M.H., Mathiason-Dubard, C., Learn, G.H., Rodrigo, A.G., Sodora, D.L., Mazzetti, P., Hoover, E.A. and Mullins, J.I. (1997) Genetic diversity of feline immunodeficiency virus: dual infection, recombination, and distinct evolutionary rates among envelope sequence clades. J. Virol. 71, 4241-4253.
    • (1997) J. Virol. , vol.71 , pp. 4241-4253
    • Bachmann, M.H.1    Mathiason-Dubard, C.2    Learn, G.H.3    Rodrigo, A.G.4    Sodora, D.L.5    Mazzetti, P.6    Hoover, E.A.7    Mullins, J.I.8
  • 4
    • 0028055069 scopus 로고
    • Assignment of 30 microsatellite loci to the linkage map of Arabidopsis
    • Bell, C.J. and Ecker, J.R. (1994) Assignment of 30 microsatellite loci to the linkage map of Arabidopsis. Genomics, 19, 137-144.
    • (1994) . Genomics , vol.19 , pp. 137-144
    • Bell, C.J.1    Ecker, J.R.2
  • 5
    • 0031961197 scopus 로고    scopus 로고
    • Genetic Variation within and among populations of Arabidopsis thaliana
    • Bergelsen, J., Stahl, E., Dudek, S. and Kreitman, M. (1998) Genetic Variation within and among populations of Arabidopsis thaliana. Genetics, 148, 1311-1323.
    • (1998) Genetics , vol.148 , pp. 1311-1323
    • Bergelsen, J.1    Stahl, E.2    Dudek, S.3    Kreitman, M.4
  • 6
    • 0030754340 scopus 로고    scopus 로고
    • Cross-clade human immunodeficiency virus (HIV)-specific cytotoxic T-lymphocyte responses in HIV-infected Zambians
    • Betts, M.R., Krowka, J., Sanatmaria, C. et al. (1997) Cross-clade human immunodeficiency virus (HIV)-specific cytotoxic T-lymphocyte responses in HIV-infected Zambians. J. Virol. 71, 8908-8911.
    • (1997) J. Virol. , vol.71 , pp. 8908-8911
    • Betts, M.R.1    Krowka, J.2    Sanatmaria, C.3
  • 8
    • 0030472370 scopus 로고    scopus 로고
    • Differentiation between vaccine-related and wild-type polioviruses using heteroduplex mobility assay
    • Chezzi, C. and Schoub, B.D. (1996) Differentiation between vaccine-related and wild-type polioviruses using heteroduplex mobility assay. J. Virol. Meth, 62, 93-102.
    • (1996) J. Virol. Meth , vol.62 , pp. 93-102
    • Chezzi, C.1    Schoub, B.D.2
  • 9
    • 0031038324 scopus 로고    scopus 로고
    • Slowly but surely towards better scanning for mutations
    • Cotton, R. (1997) Slowly but surely towards better scanning for mutations. TIGS, 13, 43-46.
    • (1997) TIGS , vol.13 , pp. 43-46
    • Cotton, R.1
  • 10
    • 0027947293 scopus 로고
    • An Arabidopsis thaliana RFLP mapping set to localize mutations to chromosomal regions
    • Fabri, C.O. and Schaeffner, A.R. (1994) An Arabidopsis thaliana RFLP mapping set to localize mutations to chromosomal regions. Plant J. 5, 149-156.
    • (1994) Plant J. , vol.5 , pp. 149-156
    • Fabri, C.O.1    Schaeffner, A.R.2
  • 11
    • 0027433113 scopus 로고
    • Conformation-sensitive gel electrophoresis for rapid detection of single-base differences in double-stranded PCR products and DNA fragments: Evidence for solvent-induced bends in DNA heteroduplexes
    • Ganguly, A., Rock, M.J. and Prockop, D.J. (1993) Conformation-sensitive gel electrophoresis for rapid detection of single-base differences in double-stranded PCR products and DNA fragments: Evidence for solvent-induced bends in DNA heteroduplexes. Proc. Natl Acad. Sci. USA, 90, 10325-10329.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 10325-10329
    • Ganguly, A.1    Rock, M.J.2    Prockop, D.J.3
  • 12
    • 0030460925 scopus 로고    scopus 로고
    • Genetic similarity among Arabidopsis thaliana ecotypes estimated by DNA sequence comparison
    • Hardtke, C.S., Müller, J. and Berleth, T. (1996) Genetic similarity among Arabidopsis thaliana ecotypes estimated by DNA sequence comparison. Plant Mol. Biol. 32, 915-922.
    • (1996) Plant Mol. Biol. , vol.32 , pp. 915-922
    • Hardtke, C.S.1    Müller, J.2    Berleth, T.3
  • 13
    • 0028952937 scopus 로고
    • Conditional root expansion mutants of Arabidopsis
    • Hauser, M.-T., Morikami, A. and Benfey, P. (1995) Conditional root expansion mutants of Arabidopsis. Development, 121, 1237-1252.
    • (1995) Development , vol.121 , pp. 1237-1252
    • Hauser, M.-T.1    Morikami, A.2    Benfey, P.3
  • 14
    • 0030821933 scopus 로고    scopus 로고
    • Detecting familial defective apolipoprotein B-100: Three molecular scanning methods compared
    • Henderson, B.C., Wenham, P.R., Ashby, J.P. and Blundell, G. (1997) Detecting familial defective apolipoprotein B-100: three molecular scanning methods compared. Clin. Chem. 43, 1630-1634.
    • (1997) Clin. Chem. , vol.43 , pp. 1630-1634
    • Henderson, B.C.1    Wenham, P.R.2    Ashby, J.P.3    Blundell, G.4
  • 15
    • 0029796494 scopus 로고    scopus 로고
    • Intragenic recombination in the Adh locus of the wild plant Arabidopsis thaliana
    • Innan, K., Tajima, R., Terauchi, R. and Miyashita, N.T. (1996) Intragenic recombination in the Adh locus of the wild plant Arabidopsis thaliana. Genetics, 143, 1761-1770.
    • (1996) Genetics , vol.143 , pp. 1761-1770
    • Innan, K.1    Tajima, R.2    Terauchi, R.3    Miyashita, N.T.4
  • 16
    • 0030803875 scopus 로고    scopus 로고
    • Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana
    • Innan, H., Terauchi, R. and Miyashita, N.T. (1997) Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana. Genetics, 146, 1441-1452.
    • (1997) Genetics , vol.146 , pp. 1441-1452
    • Innan, H.1    Terauchi, R.2    Miyashita, N.T.3
  • 17
    • 0031590602 scopus 로고    scopus 로고
    • Strong clustering and stereotyped nature of NotchS mutations in CADASIL patients
    • Joutel, A., Vahedi, K., Corpechot, C., Troesch, A. et al. (1997) Strong clustering and stereotyped nature of NotchS mutations in CADASIL patients. Lancet, 350, 1511-1515.
    • (1997) Lancet , vol.350 , pp. 1511-1515
    • Joutel, A.1    Vahedi, K.2    Corpechot, C.3    Troesch, A.4
  • 18
    • 0030729703 scopus 로고    scopus 로고
    • Nucleotide polymorphism in the acidic chitinase locus (ChiA) region of the wild plant Arabidopsis thaliana
    • Kawabe, A., Innan, H., Terauchi, R. and Miyashita, N.T. (1997) Nucleotide polymorphism in the acidic chitinase locus (ChiA) region of the wild plant Arabidopsis thaliana. Mol. Biol. Evol. 14, 1303-1315.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 1303-1315
    • Kawabe, A.1    Innan, H.2    Terauchi, R.3    Miyashita, N.T.4
  • 19
    • 0026007392 scopus 로고
    • Rapid detection of single base mismatches as heteroduplexes on HydroLink gels
    • Keen, J., Lester, D., Ingelhearn, C., Curtis, A. and Bhattacharya, S. (1991) Rapid detection of single base mismatches as heteroduplexes on HydroLink gels. TIGS, 7, 5.
    • (1991) TIGS , vol.7 , pp. 5
    • Keen, J.1    Lester, D.2    Ingelhearn, C.3    Curtis, A.4    Bhattacharya, S.5
  • 20
    • 0027650566 scopus 로고
    • A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers
    • Konieczny, A. and Ausubel, F.M. (1993) A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers. Plant J. 4, 403-410.
    • (1993) Plant J. , vol.4 , pp. 403-410
    • Konieczny, A.1    Ausubel, F.M.2
  • 21
    • 0030973692 scopus 로고    scopus 로고
    • Rapid identification of measles virus strains by the heteroduplex mobility assay
    • Kreis, S. and Whistler, T. (1997) Rapid identification of measles virus strains by the heteroduplex mobility assay. Virus Res. 47, 197-203.
    • (1997) Virus Res. , vol.47 , pp. 197-203
    • Kreis, S.1    Whistler, T.2
  • 22
    • 0031281943 scopus 로고    scopus 로고
    • Characterization of insect cell lines: Heteroduplex analysis employing a mitochondrial 16S ribosomal RNA gene fragment
    • Kshirsagar, S.G., Patole, M.S. and Shouche, Y.S. (1997) Characterization of insect cell lines: heteroduplex analysis employing a mitochondrial 16S ribosomal RNA gene fragment. Anal. Biochem. 253, 65-69.
    • (1997) Anal. Biochem. , vol.253 , pp. 65-69
    • Kshirsagar, S.G.1    Patole, M.S.2    Shouche, Y.S.3
  • 23
    • 0027165626 scopus 로고
    • Arabidopsis auxin-resistance gene AXR1 encodes a protein related to ubiquitin-activating enzyme E1
    • Leyser, O.N.M., Lincoln, C.A., Timpte, C., Lammer, D., Turner, J. and Estelle, M. (1993) Arabidopsis auxin-resistance gene AXR1 encodes a protein related to ubiquitin-activating enzyme E1. Nature, 364, 161-164.
    • (1993) Nature , vol.364 , pp. 161-164
    • Leyser, O.N.M.1    Lincoln, C.A.2    Timpte, C.3    Lammer, D.4    Turner, J.5    Estelle, M.6
  • 24
    • 0000012426 scopus 로고
    • Recombinant inbred lines for mapping RFLP and phenotypic markers in A
    • Lister, C. and Dean, C. (1993) Recombinant inbred lines for mapping RFLP and phenotypic markers in A. Thaliana. Plant J. 4, 745-750.
    • (1993) Thaliana. Plant J. , vol.4 , pp. 745-750
    • Lister, C.1    Dean, C.2
  • 25
    • 0030268467 scopus 로고    scopus 로고
    • Isolation and mapping of a new set of 129 RFLP markers in Arabidopsis thaliana using recombinant inbred lines
    • Liu, Y.G., Mitsukawa, N., Lister, C., Dean, C. and Whittier, R. (1996) Isolation and mapping of a new set of 129 RFLP markers in Arabidopsis thaliana using recombinant inbred lines. Plant J. 10, 733-736.
    • (1996) Plant J. , vol.10 , pp. 733-736
    • Liu, Y.G.1    Mitsukawa, N.2    Lister, C.3    Dean, C.4    Whittier, R.5
  • 26
    • 0031444211 scopus 로고    scopus 로고
    • Convenient, nonradioactive, heteroduplex-based methods for identifying recurrent mutations in the BRCA1 and BRCA2 genes
    • Mansukhani, M.M., Nastiuk, K.L., Hibshoosh, H., Kularantne, P., Russo, D. and Krolewski, J.J. (1997) Convenient, nonradioactive, heteroduplex-based methods for identifying recurrent mutations in the BRCA1 and BRCA2 genes. Diagn. Mol. Pathol. 6, 229-237.
    • (1997) Diagn. Mol. Pathol. , vol.6 , pp. 229-237
    • Mansukhani, M.M.1    Nastiuk, K.L.2    Hibshoosh, H.3    Kularantne, P.4    Russo, D.5    Krolewski, J.J.6
  • 27
    • 0032077256 scopus 로고    scopus 로고
    • A robust method for detecting single-nucleotide changes as polymorphic markers by PCR
    • Michaels, S.D. and Amasino, M. (1998) A robust method for detecting single-nucleotide changes as polymorphic markers by PCR. Plant J. 14, 381-385.
    • (1998) Plant J. , vol.14 , pp. 381-385
    • Michaels, S.D.1    Amasino, M.2
  • 28
    • 0030462992 scopus 로고    scopus 로고
    • Heteroduplex mobility assay (HMAs) and analogous sequence analysis of a cytochrome B region indicate phylogenetic relationships of selected callitrichids
    • Moreira, M.A., Almeida, C.A., Canavez, F., Olicio, R. and Seuanez, H.N. (1996) Heteroduplex mobility assay (HMAs) and analogous sequence analysis of a cytochrome B region indicate phylogenetic relationships of selected callitrichids. J. Hered. 87, 456-460.
    • (1996) J. Hered. , vol.87 , pp. 456-460
    • Moreira, M.A.1    Almeida, C.A.2    Canavez, F.3    Olicio, R.4    Seuanez, H.N.5
  • 30
    • 0032078072 scopus 로고    scopus 로고
    • CAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms: Experimental applications in Arabidopsis thaliana genetics
    • Neff, M.M., Neff, J.D., Chory, J. and Pepper, A.E. (1998) dCAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms: experimental applications in Arabidopsis thaliana genetics. Plant J. 14, 387-392.
    • (1998) Plant J. , vol.14 , pp. 387-392
    • Neff, M.M.1    Neff, J.D.2    Chory, J.3    Pepper, A.E.4
  • 32
    • 0028917326 scopus 로고
    • Rapid DNA haplotyping using a multiplex heteroduplex approach: Application to Duchenne muscular dystrophy carrier testing
    • Prior, T.W., Wenger, G.D., Papp, A.C., Snyder, P.J., Sedra, M.S., Bartolo, C., Moore, J.W. and Highsmith, W.E. (1995) Rapid DNA haplotyping using a multiplex heteroduplex approach: application to Duchenne muscular dystrophy carrier testing. Hum. Mutat. 5, 263-268.
    • (1995) Hum. Mutat. , vol.5 , pp. 263-268
    • Prior, T.W.1    Wenger, G.D.2    Papp, A.C.3    Snyder, P.J.4    Sedra, M.S.5    Bartolo, C.6    Moore, J.W.7    Highsmith, W.E.8
  • 33
    • 0028088502 scopus 로고
    • Detection of a single base mismatch in double-stranded DNA by electrophoresis on uncrosslinked polyacrylamide gel
    • Pulyaeva, H., Zakharov, S.F., Garner, M.M. and Chrambach, A. (1994) Detection of a single base mismatch in double-stranded DNA by electrophoresis on uncrosslinked polyacrylamide gel. Electrophoresis, 15, 1095-1100.
    • (1994) Electrophoresis , vol.15 , pp. 1095-1100
    • Pulyaeva, H.1    Zakharov, S.F.2    Garner, M.M.3    Chrambach, A.4
  • 34
    • 0001810352 scopus 로고
    • Extraction of DNA from plant tissue
    • Dordrecht: Kluwer Academic Publishers
    • Rogers, S.O. and Bendich, A.J. (1988) Extraction of DNA from plant tissue. In Plant Molecular Biology Manual A6. Dordrecht: Kluwer Academic Publishers, pp. 1-10.
    • (1988) Plant Molecular Biology Manual A6 , pp. 1-10
    • Rogers, S.O.1    Bendich, A.J.2
  • 36
    • 0029023131 scopus 로고
    • Microsatellite polymorphisms in natural populations of Arabidopsis thaliana in Japan
    • Todokoro, S., Terauchi, R. and Kawano, S. (1995) Microsatellite polymorphisms in natural populations of Arabidopsis thaliana in Japan. Jpn. J. Genet. 70, 543-554.
    • (1995) Jpn. J. Genet. , vol.70 , pp. 543-554
    • Todokoro, S.1    Terauchi, R.2    Kawano, S.3
  • 37
    • 0031053832 scopus 로고    scopus 로고
    • Mitochondrial DNA variations and nuclear RFLPs reflect different genetic similarities among 23 Arabidopsis thaliana ecotypes
    • Ullrich, H., Lättig, K., Bernnicke, A. and Knoop, V. (1997) Mitochondrial DNA variations and nuclear RFLPs reflect different genetic similarities among 23 Arabidopsis thaliana ecotypes. Plant Mol. Biol. 33, 37-45.
    • (1997) Plant Mol. Biol. , vol.33 , pp. 37-45
    • Ullrich, H.1    Lättig, K.2    Bernnicke, A.3    Knoop, V.4
  • 39
    • 0030029970 scopus 로고    scopus 로고
    • A pre-Columbian human Y chromosome-specific transition and its implications for human evolution
    • Underhill, P.A., Lin, A.A., Zemans, R., Oefner, P.J. and Cavalli-Sforza, L.L. (1996) A pre-Columbian human Y chromosome-specific transition and its implications for human evolution. Proc. Natl Acad. Sci. 93, 196-200.
    • (1996) Proc. Natl Acad. Sci. , vol.93 , pp. 196-200
    • Underhill, P.A.1    Lin, A.A.2    Zemans, R.3    Oefner, P.J.4    Cavalli-Sforza, L.L.5
  • 40
    • 0030683575 scopus 로고    scopus 로고
    • North American and french caprine arthritis-encephalitis viruses emerge from ovine maedi-visna viruses
    • Valas, S., Benoit, C., Guionaud, C., Perrin, G. and Mamoun, R.Z. (1997) North American and french caprine arthritis-encephalitis viruses emerge from ovine maedi-visna viruses. Virology, 237, 307-318.
    • (1997) Virology , vol.237 , pp. 307-318
    • Valas, S.1    Benoit, C.2    Guionaud, C.3    Perrin, G.4    Mamoun, R.Z.5
  • 41
    • 0026549893 scopus 로고
    • Detecting single base substitutions as heteroduplex polymorphisms
    • White, M.B., Carvallo, M., Derse, D., O'Brien, S.J. and Dean, M. (1992) Detecting single base substitutions as heteroduplex polymorphisms. Genomics, 12, 301-306.
    • (1992) Genomics , vol.12 , pp. 301-306
    • White, M.B.1    Carvallo, M.2    Derse, D.3    O'Brien, S.J.4    Dean, M.5
  • 42
    • 0030912342 scopus 로고    scopus 로고
    • Six novel mutations in the emerin gene causing x-linked Emery-Dreifuss muscular dystrophy
    • Wulff, K., Parrish, J.E., Herrmann, F.H. and Wehnert, M. (1997) Six novel mutations in the emerin gene causing x-linked Emery-Dreifuss muscular dystrophy. Hum. Mutat. 9, 526-530.
    • (1997) Hum. Mutat. , vol.9 , pp. 526-530
    • Wulff, K.1    Parrish, J.E.2    Herrmann, F.H.3    Wehnert, M.4


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