-
1
-
-
77953584054
-
Creation of a bacterial cell controlled by a chemically synthesized genome
-
Gibson, D. et al. Creation of a bacterial cell controlled by a chemically synthesized genome. Science 329, 52-56 (2010).
-
(2010)
Science
, vol.329
, pp. 52-56
-
-
Gibson, D.1
-
2
-
-
0037079012
-
Engineered gene circuits
-
DOI 10.1038/nature01257
-
Hasty, J., McMillen, D. & Collins, J. J. Engineered gene circuits. Nature 420, 224-230 (2002). (Pubitemid 35340134)
-
(2002)
Nature
, vol.420
, Issue.6912
, pp. 224-230
-
-
Hasty, J.1
McMillen, D.2
Collins, J.J.3
-
3
-
-
28544440364
-
Reconstruction of genetic circuits
-
DOI 10.1038/nature04335, PII N04335
-
Sprinzak, D. & Elowitz, M. B. Reconstruction of genetic circuits. Nature 438, 443-448 (2005). (Pubitemid 41742009)
-
(2005)
Nature
, vol.438
, Issue.7067
, pp. 443-448
-
-
Sprinzak, D.1
Elowitz, M.B.2
-
4
-
-
28544451327
-
Foundations for engineering biology
-
DOI 10.1038/nature04342, PII N04342
-
Endy, D. Foundations for engineering biology. Nature 438, 449-453 (2005). (Pubitemid 41742010)
-
(2005)
Nature
, vol.438
, Issue.7067
, pp. 449-453
-
-
Endy, D.1
-
5
-
-
66149172363
-
Diversity-based model-guided construction of synthetic gene networks with predicted functions
-
Ellis, T., Wang, X. & Collins, J. Diversity-based, model-guided construction of synthetic gene networks with predicted functions. Nature Biotechnol. 27, 465-471 (2009).
-
(2009)
Nature Biotechnol.
, vol.27
, pp. 465-471
-
-
Ellis, T.1
Wang, X.2
Collins, J.3
-
6
-
-
2942614884
-
Programmable cells: Interfacing natural and engineered gene networks
-
DOI 10.1073/pnas.0402940101
-
Kobayashi, H. et al. Programmable cells: interfacing natural and engineered gene networks. Proc. Natl Acad. Sci. USA 101, 8414-8419 (2004). (Pubitemid 38736589)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.22
, pp. 8414-8419
-
-
Kobayashi, H.1
Kaern, M.2
Araki, M.3
Chung, K.4
Gardner, T.S.5
Cantor, C.R.6
Collins, J.J.7
-
7
-
-
1942467023
-
Programmed population control by cell-cell communication and regulated killing
-
DOI 10.1038/nature02491
-
You, L., Cox, R. S. III, Weiss, R. & Arnold, F. H. Programmed population control by cell-cell communication and regulated killing. Nature 428, 868-871 (2004). (Pubitemid 38529503)
-
(2004)
Nature
, vol.428
, Issue.6985
, pp. 868-871
-
-
You, L.1
Cox III, R.S.2
Weiss, R.3
Arnold, F.H.4
-
8
-
-
17844374314
-
A synthetic multicellular system for programmed pattern formation
-
DOI 10.1038/nature03461
-
Basu, S., Gerchman, Y., Collins, C. H., Arnold, F. H. & Weiss, R. A synthetic multicellular system for programmed pattern formation. Nature 434, 1130-1134 (2005). (Pubitemid 40663491)
-
(2005)
Nature
, vol.434
, Issue.7037
, pp. 1130-1134
-
-
Basu, S.1
Gerchman, Y.2
Collins, C.H.3
Arnold, F.H.4
Weiss, R.5
-
9
-
-
70450223309
-
Synthetic biology: Understanding biological design from synthetic circuits
-
Mukherji, S. & Van Oudenaarden, A. Synthetic biology: understanding biological design from synthetic circuits. Nature Rev. Genet. 10, 859-871 (2009).
-
(2009)
Nature Rev. Genet.
, vol.10
, pp. 859-871
-
-
Mukherji, S.1
Van Oudenaarden, A.2
-
10
-
-
34547607675
-
A synthetic gene network for tuning protein degradation in Saccharomyces cerevisiae
-
Grilly, C., Stricker, J., Pang, W., Bennett, M. & Hasty, J. A synthetic gene network for tuning protein degradation in Saccharomyces cerevisiae. Mol. Syst. Biol. 3, 127 (2007).
-
(2007)
Mol. Syst. Biol.
, vol.3
, pp. 127
-
-
Grilly, C.1
Stricker, J.2
Pang, W.3
Bennett, M.4
Hasty, J.5
-
11
-
-
0034688174
-
Construction of a genetic toggle switch in Escherichia coli
-
DOI 10.1038/35002131
-
Gardner, T. S., Cantor, C. R.& Collins, J. J. Construction of a genetic toggle switch in Escherichia coli. Nature 403, 339-342 (2000). (Pubitemid 30062394)
-
(2000)
Nature
, vol.403
, Issue.6767
, pp. 339-342
-
-
Gardner, T.S.1
Cantor, C.R.2
Collins, J.J.3
-
12
-
-
0034688173
-
A synthetic oscillatory network of transcriptional regulators
-
DOI 10.1038/35002125
-
Elowitz, M. B. & Leibler, S. A synthetic oscillatory network of transcriptional regulators. Nature 403, 335-338 (2000). (Pubitemid 30062393)
-
(2000)
Nature
, vol.403
, Issue.6767
, pp. 335-338
-
-
Elowitz, M.B.1
Leibier, S.2
-
14
-
-
66349125024
-
Synthetic gene networks that count
-
Friedland, A. et al. Synthetic gene networks that count. Science 324, 1199-1202 (2009).
-
(2009)
Science
, vol.324
, pp. 1199-1202
-
-
Friedland, A.1
-
15
-
-
75149191906
-
A synchronized quorum of genetic clocks
-
Danino, T., Mondragon-Palomino, O., Tsimring, L. & Hasty, J. A synchronized quorum of genetic clocks. Nature 463, 326-330 (2010).
-
(2010)
Nature
, vol.463
, pp. 326-330
-
-
Danino, T.1
Mondragon-Palomino, O.2
Tsimring, L.3
Hasty, J.4
-
16
-
-
78651397316
-
Robust multicellular computing using genetically encoded NOR gates and chemical 'wires'
-
Tamsir, A., Tabor, J. & Voigt, C. Robust multicellular computing using genetically encoded NOR gates and chemical 'wires'. Nature 469, 212-215 (2011).
-
(2011)
Nature
, vol.469
, pp. 212-215
-
-
Tamsir, A.1
Tabor, J.2
Voigt, C.3
-
17
-
-
67549145283
-
A synthetic genetic edge detection program
-
Tabor, J. et al. A synthetic genetic edge detection program. Cell 137, 1272-1281 (2009).
-
(2009)
Cell
, vol.137
, pp. 1272-1281
-
-
Tabor, J.1
-
18
-
-
57049159362
-
A fast, robust and tunable synthetic gene oscillator
-
DOI 10.1038/nature07389, PII NATURE07389
-
Stricker, J. et al. A fast, robust and tunable synthetic gene oscillator. Nature 456, 516-519 (2008). (Pubitemid 352759003)
-
(2008)
Nature
, vol.456
, Issue.7221
, pp. 516-519
-
-
Stricker, J.1
Cookson, S.2
Bennett, M.R.3
Mather, W.H.4
Tsimring, L.S.5
Hasty, J.6
-
19
-
-
80052498962
-
Entrainment of a population of synthetic genetic oscillators
-
Mondragon-Palomino, O., Danino, T., Selimkhanov, J., Tsimring, L. & Hasty, J. Entrainment of a population of synthetic genetic oscillators. Science 333, 1315-1319 (2011).
-
(2011)
Science
, vol.333
, pp. 1315-1319
-
-
Mondragon-Palomino, O.1
Danino, T.2
Selimkhanov, J.3
Tsimring, L.4
Hasty, J.5
-
20
-
-
58249117722
-
A tunable synthetic mammalian oscillator
-
Tigges, M., Marquez-Lago, T., Stelling, J. & Fussenegger, M. A tunable synthetic mammalian oscillator. Nature 457, 309-312 (2009).
-
(2009)
Nature
, vol.457
, pp. 309-312
-
-
Tigges, M.1
Marquez-Lago, T.2
Stelling, J.3
Fussenegger, M.4
-
22
-
-
0032715746
-
GPS: Primary tool for timetransfer
-
Lewandowski, W., Azoubib, J.&Klepczynski, W.GPS: primary tool for timetransfer. Proc. IEEE 87, 163-172 (1999).
-
(1999)
Proc. IEEE
, vol.87
, pp. 163-172
-
-
Lewandowski, W.1
Azoubib, J.2
Klepczynski, W.3
-
23
-
-
0037338051
-
Synchronization of weakly stable oscillators and semiconductor laser arrays
-
Vladimirov, A., Kozyreff, G. & Mandel, P. Synchronization of weakly stable oscillators and semiconductor laser arrays. Europhys. Lett. 61, 613 (2003).
-
(2003)
Europhys. Lett.
, vol.61
, pp. 613
-
-
Vladimirov, A.1
Kozyreff, G.2
Mandel, P.3
-
24
-
-
0022132164
-
Sensors with oscillating elements
-
Gast, T. Sensors with oscillating elements. J. Phys. E: Sci. Instrum. 18, 783 (1985).
-
(1985)
J. Phys. E: Sci. Instrum.
, vol.18
, pp. 783
-
-
Gast, T.1
-
25
-
-
0036578645
-
Regulation of noise in the expression of a single gene
-
Ozbudak, E. M., Thattai, M., Kurtser, I., Grossman, A. D. & van Oudenaarden, A. Regulation of noise in the expression of a single gene. Nature Genet. 31, 69-73 (2002).
-
(2002)
Nature Genet.
, vol.31
, pp. 69-73
-
-
Ozbudak, E.M.1
Thattai, M.2
Kurtser, I.3
Grossman, A.D.4
Van Oudenaarden, A.5
-
26
-
-
0037119587
-
Stochastic gene expression in a single cell
-
DOI 10.1126/science.1070919
-
Elowitz, M. B., Levine, A. J., Siggia, E. D.& Swain, P. S. Stochastic gene expression in a single cell. Science 297, 1183-1186 (2002). (Pubitemid 36193353)
-
(2002)
Science
, vol.297
, Issue.5584
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
27
-
-
28944434119
-
Real-time kinetics of gene activity in individual bacteria
-
DOI 10.1016/j.cell.2005.09.031, PII S0092867405010378
-
Golding, I., Paulsson, J., Zawilski, S. & Cox, E. Real-time kinetics of gene activity in individual bacteria. Cell 123, 1025-1036 (2005). (Pubitemid 41785418)
-
(2005)
Cell
, vol.123
, Issue.6
, pp. 1025-1036
-
-
Golding, I.1
Paulsson, J.2
Zawilski, S.M.3
Cox, E.C.4
-
28
-
-
33845616177
-
Phenotypic consequences of promoter-mediated transcriptional noise
-
DOI 10.1016/j.molcel.2006.11.003, PII S1097276506007441
-
Blake, W. et al. Phenotypic consequences of promoter-mediated transcriptional noise. Mol. Cell 24, 853-865 (2006). (Pubitemid 44960090)
-
(2006)
Molecular Cell
, vol.24
, Issue.6
, pp. 853-865
-
-
Blake, W.J.1
Balazsi, G.2
Kohanski, M.A.3
Isaacs, F.J.4
Murphy, K.F.5
Kuang, Y.6
Cantor, C.R.7
Walt, D.R.8
Collins, J.J.9
-
29
-
-
31844449923
-
Gene network shaping of inherent noise spectra
-
DOI 10.1038/nature04194, PII NATURE04194
-
Austin, D. et al. Gene network shaping of inherent noise spectra. Nature 439, 608-611 (2006). (Pubitemid 43185386)
-
(2006)
Nature
, vol.439
, Issue.7076
, pp. 608-611
-
-
Austin, D.W.1
Allen, M.S.2
McCollum, J.M.3
Dar, R.D.4
Wilgus, J.R.5
Sayler, G.S.6
Samatova, N.F.7
Cox, C.D.8
Simpson, M.L.9
-
31
-
-
79957517718
-
Microfluidics for synthetic biology from design to execution
-
Ferry, M., Razinkov, I. & Hasty, J. Microfluidics for synthetic biology from design to execution. Methods Enzymol. 497, 295 (2011).
-
(2011)
Methods Enzymol.
, vol.497
, pp. 295
-
-
Ferry, M.1
Razinkov, I.2
Hasty, J.3
-
32
-
-
0033538048
-
The identification of primary sites of superoxide and hydrogen peroxide formation in the aerobic respiratory chain and sulfite reductase complex of Escherichia coli
-
Messner, K. & Imlay, J. The identification of primary sites of superoxide and hydrogen peroxide formation in the aerobic respiratory chain and sulfite reductase complex of Escherichia coli. J. Biol. Chem. 274, 10119-10128 (1999).
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 10119-10128
-
-
Messner, K.1
Imlay, J.2
-
33
-
-
34447307386
-
Bioluminescence in Vibrio fischeri is controlled by the redox-responsive regulator ArcA
-
DOI 10.1111/j.1365-2958.2007.05809.x
-
Bose, J. L. et al. Bioluminescence in Vibrio fischeri is controlled by the redoxresponsive regulator arca. Mol. Microbiol. 65, 538-553 (2007). (Pubitemid 47052734)
-
(2007)
Molecular Microbiology
, vol.65
, Issue.2
, pp. 538-553
-
-
Bose, J.L.1
Kim, U.2
Bartkowski, W.3
Gunsalus, R.P.4
Overley, A.M.5
Lyell, N.L.6
Visick, K.L.7
Stabb, E.V.8
-
34
-
-
0035933597
-
Quinones as the redox signal for the Arc two-component system of bacteria
-
DOI 10.1126/science.1059361
-
Georgellis, D., Kwon, O. & Lin, E. Quinones as the redox signal for the arc twocomponent system of bacteria. Science 292, 2314-2316 (2001). (Pubitemid 32568050)
-
(2001)
Science
, vol.292
, Issue.5525
, pp. 2314-2316
-
-
Georgellis, D.1
Kwon, O.2
Lin, E.C.C.3
-
35
-
-
0035212036
-
Hydrogen peroxide fluxes and compartmentalization inside growing Escherichia coli
-
DOI 10.1128/JB.183.24.7182-7189.2001
-
Seaver, L. & Imlay, J. Hydrogen peroxide fluxes and compartmentalization inside growing Escherichia coli. J. Bacteriol. 183, 7182-7189 (2001). (Pubitemid 33121852)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.24
, pp. 7182-7189
-
-
Seaver, L.C.1
Imlay, J.A.2
-
36
-
-
0018263443
-
The biology of oxygen radicals
-
Fridovich, I. The biology of oxygen radicals. Science 201, 875-880 (1978).
-
(1978)
Science
, vol.201
, pp. 875-880
-
-
Fridovich, I.1
-
39
-
-
34547448862
-
Fluorescent proteins: Maturation, photochemistry and photophysics
-
DOI 10.1016/j.sbi.2006.10.001, PII S0959440X06001734, Catalysis and Regulation / Proteins
-
Remington, S. Fluorescent proteins: maturation, photochemistry and photophysics. Curr. Opin. Struct. Biol. 16, 714-721 (2006). (Pubitemid 44827725)
-
(2006)
Current Opinion in Structural Biology
, vol.16
, Issue.6
, pp. 714-721
-
-
Remington, S.J.1
-
40
-
-
0025137028
-
Thioureas react with superoxide radicals to yield a sulfhydryl compound. explanation for protective effect against paraquat
-
Kelner, M., Bagnell, R.& Welch, K. Thioureas react with superoxide radicals to yield a sulfhydryl compound. explanation for protective effect against paraquat. J. Biol. Chem. 265, 1306-1311 (1990).
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 1306-1311
-
-
Kelner, M.1
Bagnell, R.2
Welch, K.3
-
41
-
-
0029041226
-
Lethal oxidative damage and mutagenesis are generated by iron in delta fur mutants of Escherichia coli: Protective role of superoxide dismutase
-
Touati, D., Jacques, M., Tardat, B., Bouchard, L. & Despied, S. Lethal oxidative damage and mutagenesis are generated by iron in delta fur mutants of Escherichia coli: protective role of superoxide dismutase. J. Bacteriol. 177, 2305-2314 (1995).
-
(1995)
J. Bacteriol.
, vol.177
, pp. 2305-2314
-
-
Touati, D.1
Jacques, M.2
Tardat, B.3
Bouchard, L.4
Despied, S.5
-
42
-
-
75949092532
-
Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis
-
Kohanski, M. A., DePristo, M. A. & Collins, J. J. Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis. Mol. Cell 37, 311-320 (2010).
-
(2010)
Mol. Cell
, vol.37
, pp. 311-320
-
-
Kohanski, M.A.1
Depristo, M.A.2
Collins, J.J.3
-
43
-
-
0037150531
-
Worldwide occurrences of arsenic in ground water
-
Nordstrom, D. Worldwide occurrences of arsenic in ground water. Science 296, 2143 (2002).
-
(2002)
Science
, vol.296
, pp. 2143
-
-
Nordstrom, D.1
-
44
-
-
77953622209
-
Where microbiology meets microengineering: Design and applications of reporter bacteria
-
van der Meer, J. & Belkin, S. Where microbiology meets microengineering: design and applications of reporter bacteria. Nature Rev. Microbiol. 8, 511-522 (2010).
-
(2010)
Nature Rev. Microbiol.
, vol.8
, pp. 511-522
-
-
Van Der Meer, J.1
Belkin, S.2
-
45
-
-
0034226255
-
Genetically engineered whole-cell sensing systems: Coupling biological recognition with reporter genes
-
Daunert, S. et al. Genetically engineered whole-cell sensing systems: coupling biological recognition with reporter genes. Chem. Rev. 100, 2705-2738 (2000).
-
(2000)
Chem. Rev.
, vol.100
, pp. 2705-2738
-
-
Daunert, S.1
-
46
-
-
0036273589
-
Bioreporters in microbial ecology
-
DOI 10.1016/S1369-5274(02)00321-1
-
Leveau, J. & Lindow, S. Bioreporters in microbial ecology. Curr. Opin. Microbiol. 5, 259-265 (2002). (Pubitemid 34614937)
-
(2002)
Current Opinion in Microbiology
, vol.5
, Issue.3
, pp. 259-265
-
-
Leveau, J.H.J.1
Lindow, S.E.2
-
47
-
-
61349161146
-
Delay-induced degrade-and-fire oscillations in small genetic circuits
-
Mather, W., Bennett, M., Hasty, J. & Tsimring, L. Delay-induced degrade-and-fire oscillations in small genetic circuits. Phys. Rev. Lett. 102, 068105 (2009).
-
(2009)
Phys. Rev. Lett.
, vol.102
, pp. 068105
-
-
Mather, W.1
Bennett, M.2
Hasty, J.3
Tsimring, L.4
-
48
-
-
68149136937
-
Circular polymerase extension cloning of complex gene libraries and pathways
-
Quan, J.& Tian, J. Circular polymerase extension cloning of complex gene libraries and pathways. PLoS ONE 4, e6441 (2009).
-
(2009)
PLoS ONE
, vol.4
-
-
Quan, J.1
Tian, J.2
-
49
-
-
0142027136
-
Development of a set of simple bacterial biosensors for quantitative and rapid measurements of arsenite and arsenate in potable water
-
DOI 10.1021/es034258b
-
Stocker, J. et al.Development of a set of simplebacterial biosensors for quantitative and rapid measurements of arsenite and arsenate in potable water. Environ. Sci. Technol. 37, 4743-4750 (2003). (Pubitemid 37266395)
-
(2003)
Environmental Science and Technology
, vol.37
, Issue.20
, pp. 4743-4750
-
-
Stocker, J.1
Balluch, D.2
Gsell, M.3
Harms, H.4
Feliciano, J.5
Daunert, S.6
Malik, K.A.7
Van Der Meer, J.R.8
-
50
-
-
0030024281
-
Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA
-
Keiler, K., Waller, P. & Sauer, R. Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA. Science 271, 990-993 (1996). (Pubitemid 26066397)
-
(1996)
Science
, vol.271
, Issue.5251
, pp. 990-993
-
-
Keiler, K.C.1
Waller, P.R.H.2
Sauer, R.T.3
|