메뉴 건너뛰기




Volumn 79, Issue 1, 2012, Pages 84-91

3D-QSAR and molecular docking studies on substituted isothiazole analogs as inhibitors against MEK-1 kinase

Author keywords

Allosteric inhibitor; Comparative molecular field analysis; Comparative molecular similarity indices analysis; MEK 1 kinase; Molecular docking; Substituted isothiazole analogs; Three dimensional quantitative structure activity relationship

Indexed keywords

ENZYME INHIBITOR; ISOTHIAZOLE DERIVATIVE; MITOGEN ACTIVATED PROTEIN KINASE KINASE 1; MITOGEN ACTIVATED PROTEIN KINASE KINASE 2;

EID: 84155162375     PISSN: 17470277     EISSN: 17470285     Source Type: Journal    
DOI: 10.1111/j.1747-0285.2011.01250.x     Document Type: Article
Times cited : (13)

References (37)
  • 2
    • 0029559183 scopus 로고
    • The C. elegans ksr-1 gene encodes a novel Raf-related kinase involved in Ras-mediated signal transduction
    • Sundaram M., Han M. (1995) The C. elegans ksr-1 gene encodes a novel Raf-related kinase involved in Ras-mediated signal transduction. Cell;83:889-901.
    • (1995) Cell , vol.83 , pp. 889-901
    • Sundaram, M.1    Han, M.2
  • 3
    • 34248576576 scopus 로고    scopus 로고
    • KSR and CNK: two scaffolds regulating RAS-mediated RAF activation
    • Clape ron A., Therrien M. (2007) KSR and CNK: two scaffolds regulating RAS-mediated RAF activation. Oncogene;26:3143-3158.
    • (2007) Oncogene , vol.26 , pp. 3143-3158
    • Clape ron, A.1    Therrien, M.2
  • 4
    • 0005261734 scopus 로고
    • Rapid stimulation by insulin of a serine/threonine kinase in 3T3-L1 adipocytes that phosphorylates microtubule-associated protein 2 in vitro
    • Ray L.B., Sturgill T.W. (1987) Rapid stimulation by insulin of a serine/threonine kinase in 3T3-L1 adipocytes that phosphorylates microtubule-associated protein 2 in vitro. Proc Natl Acad Sci USA;84:1502-1506.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 1502-1506
    • Ray, L.B.1    Sturgill, T.W.2
  • 7
    • 0036333485 scopus 로고    scopus 로고
    • Rac-PAK signaling stimulates extracellular signal-regulated kinase (ERK) activation by regulating formation of MEK1-ERK complexes
    • Eblen S.T., Slack J.K., Weber M.J., Catling A.D. (2002) Rac-PAK signaling stimulates extracellular signal-regulated kinase (ERK) activation by regulating formation of MEK1-ERK complexes. Mol Cell Biol;22:6023-6033.
    • (2002) Mol Cell Biol , vol.22 , pp. 6023-6033
    • Eblen, S.T.1    Slack, J.K.2    Weber, M.J.3    Catling, A.D.4
  • 8
    • 0030062094 scopus 로고    scopus 로고
    • Selective activation of MEK1 but not MEK2 by A-Raf from epidermal growth factor-stimulated Hela cells
    • Wu X., Noh S.J., Zhou G., Dixon J.E., Guan K.L. (1996) Selective activation of MEK1 but not MEK2 by A-Raf from epidermal growth factor-stimulated Hela cells. J Biol Chem;271:3265-3271.
    • (1996) J Biol Chem , vol.271 , pp. 3265-3271
    • Wu, X.1    Noh, S.J.2    Zhou, G.3    Dixon, J.E.4    Guan, K.L.5
  • 9
    • 0030760981 scopus 로고    scopus 로고
    • Differential regulation of mitogen-activated protein/ERK kinase MEK1 and MEK2 and activation by a Ras-independent mechanism
    • Xu S., Khoo S., Dang A., Witt S., Do V., Zhen E., Schaefer E.M., Cobb M.H. (1997) Differential regulation of mitogen-activated protein/ERK kinase MEK1 and MEK2 and activation by a Ras-independent mechanism. Mol Endocrinol;11:1618-1625.
    • (1997) Mol Endocrinol , vol.11 , pp. 1618-1625
    • Xu, S.1    Khoo, S.2    Dang, A.3    Witt, S.4    Do, V.5    Zhen, E.6    Schaefer, E.M.7    Cobb, M.H.8
  • 11
    • 0035958732 scopus 로고    scopus 로고
    • Effects of MAP kinase cascade inhibitors on the MKK5/ERK5 pathway
    • Mody N., Leitch J., Armstrong C., Dixon J., Cohen P. (2001) Effects of MAP kinase cascade inhibitors on the MKK5/ERK5 pathway. FEBS Lett;502:21-24.
    • (2001) FEBS Lett , vol.502 , pp. 21-24
    • Mody, N.1    Leitch, J.2    Armstrong, C.3    Dixon, J.4    Cohen, P.5
  • 12
    • 0033543549 scopus 로고    scopus 로고
    • Activation of the protein kinase ERK5/BMK1 by receptor tyrosine kinases. Identification and characterization of a signaling pathway to the nucleus
    • Kamakura S., Moriguchi T., Nishida E. (1999) Activation of the protein kinase ERK5/BMK1 by receptor tyrosine kinases. Identification and characterization of a signaling pathway to the nucleus. J Biol Chem;274:26563-26571.
    • (1999) J Biol Chem , vol.274 , pp. 26563-26571
    • Kamakura, S.1    Moriguchi, T.2    Nishida, E.3
  • 13
    • 15744380263 scopus 로고    scopus 로고
    • Structures of human MAP kinase kinase 1 (MEK1) and MEK2 describe novel noncompetitive kinase inhibition
    • Ohren J.F., Chen H., Pavlovsky A., Whitehead C., Zhang E., Kuffa P., Yan C. et al. (2004) Structures of human MAP kinase kinase 1 (MEK1) and MEK2 describe novel noncompetitive kinase inhibition. Nat Struct Mol Biol;11:1192-1197.
    • (2004) Nat Struct Mol Biol , vol.11 , pp. 1192-1197
    • Ohren, J.F.1    Chen, H.2    Pavlovsky, A.3    Whitehead, C.4    Zhang, E.5    Kuffa, P.6    Yan, C.7
  • 14
    • 77949464718 scopus 로고    scopus 로고
    • From basic research to clinical development of MEK1/2 inhibitors for cancer therapy
    • Frémin C., Meloche S. (2010) From basic research to clinical development of MEK1/2 inhibitors for cancer therapy. J Hematol Oncol;3:8.
    • (2010) J Hematol Oncol , vol.3 , pp. 8
    • Frémin, C.1    Meloche, S.2
  • 16
    • 43749103335 scopus 로고    scopus 로고
    • Phase I pharmacokinetic and pharmacodynamic study of the oral, small molecule mitogen-activated protein kinase 1/2 inhibitor AZD6244 (ARRY-142886) in patients with advanced cancers
    • Adjei A.A., Cohen R.B., Franklin W., Morris C., Wilson D., Molina J.R., Hanson L.J., Gore L., Chow L., Leong S. (2008) Phase I pharmacokinetic and pharmacodynamic study of the oral, small molecule mitogen-activated protein kinase 1/2 inhibitor AZD6244 (ARRY-142886) in patients with advanced cancers. J Clin Oncol;26:2139-2146.
    • (2008) J Clin Oncol , vol.26 , pp. 2139-2146
    • Adjei, A.A.1    Cohen, R.B.2    Franklin, W.3    Morris, C.4    Wilson, D.5    Molina, J.R.6    Hanson, L.J.7    Gore, L.8    Chow, L.9    Leong, S.10
  • 18
    • 0023751431 scopus 로고
    • Comparative molecular field analysis (CoMFA).1. Effect of shape on binding of steroids to carrier proteins
    • Cramer R.D. III, Patterson D.E., Bunce J.D. (1988) Comparative molecular field analysis (CoMFA).1. Effect of shape on binding of steroids to carrier proteins. J Am Chem Soc;110:5959-5967.
    • (1988) J Am Chem Soc , vol.110 , pp. 5959-5967
    • Cramer III, R.D.1    Patterson, D.E.2    Bunce, J.D.3
  • 19
    • 0027944195 scopus 로고
    • Molecular similarity indices in a comparative analysis (CoMSIA) of drug molecules to correlate and predict their biological activity
    • Klebe G., Abraham U., Mietzner T. (1994) Molecular similarity indices in a comparative analysis (CoMSIA) of drug molecules to correlate and predict their biological activity. J Med Chem;37:4130-4146.
    • (1994) J Med Chem , vol.37 , pp. 4130-4146
    • Klebe, G.1    Abraham, U.2    Mietzner, T.3
  • 20
    • 84987100711 scopus 로고
    • Cross validation, bootstrapping, and partial least squares compared with multiple regression in conventional QSAR studies
    • Cramer R.D. III, Bunce J.D., Patterson D.E., Frank I.E. (1988) Cross validation, bootstrapping, and partial least squares compared with multiple regression in conventional QSAR studies. Quant Struct Act Relat;7:18-25.
    • (1988) Quant Struct Act Relat , vol.7 , pp. 18-25
    • Cramer III, R.D.1    Bunce, J.D.2    Patterson, D.E.3    Frank, I.E.4
  • 21
    • 31044453322 scopus 로고    scopus 로고
    • Understanding the structure activity and structure-selectivity correlation of cyclic guanine derivatives as phosphodiesterase-5 inhibitors by molecular docking, CoMFA and CoMSIA analyses
    • Yang G.F., Lu H.T., Xiong Y., Zhan C.G. (2006) Understanding the structure activity and structure-selectivity correlation of cyclic guanine derivatives as phosphodiesterase-5 inhibitors by molecular docking, CoMFA and CoMSIA analyses. Bioorg Med Chem;14:1462-1473.
    • (2006) Bioorg Med Chem , vol.14 , pp. 1462-1473
    • Yang, G.F.1    Lu, H.T.2    Xiong, Y.3    Zhan, C.G.4
  • 22
    • 0028854034 scopus 로고
    • Molecular recognition of receptor sites using a genetic algorithm with a description of desolvation
    • Jones G., Willett P., Glen R.C. (1995) Molecular recognition of receptor sites using a genetic algorithm with a description of desolvation. J Mol Biol;245:43-53.
    • (1995) J Mol Biol , vol.245 , pp. 43-53
    • Jones, G.1    Willett, P.2    Glen, R.C.3
  • 23
    • 0031552362 scopus 로고    scopus 로고
    • Development and validation of a genetic algorithm for flexible docking
    • Jones G., Willett P., Glen R.C., Leach A.R., Taylor R. (1997) Development and validation of a genetic algorithm for flexible docking. J Mol Biol;267:727-748.
    • (1997) J Mol Biol , vol.267 , pp. 727-748
    • Jones, G.1    Willett, P.2    Glen, R.C.3    Leach, A.R.4    Taylor, R.5
  • 27
    • 0024716284 scopus 로고
    • Atomic physicochemical parameters for three dimensional structure directed quantitative structure- activity relationships. 4. Additional parameters for hydrophobic and dispersive interactions and their application for an automated superposition of certain naturally occurring nucleoside antibiotics
    • Viswanadhan V.N., Ghose A.K., Revankar G.R., Robins R.K. (1989) Atomic physicochemical parameters for three dimensional structure directed quantitative structure- activity relationships. 4. Additional parameters for hydrophobic and dispersive interactions and their application for an automated superposition of certain naturally occurring nucleoside antibiotics. J Chem Inf Comput Sci;29:163-172.
    • (1989) J Chem Inf Comput Sci , vol.29 , pp. 163-172
    • Viswanadhan, V.N.1    Ghose, A.K.2    Revankar, G.R.3    Robins, R.K.4
  • 28
    • 0142124197 scopus 로고    scopus 로고
    • Receptor-guided alignment-based comparative 3D-QSAR studies of benzylidene malonitrile tyrphostins as EGFR and HER-2 kinase inhibitors
    • Kamath S., Buolamwini J.K. (2003) Receptor-guided alignment-based comparative 3D-QSAR studies of benzylidene malonitrile tyrphostins as EGFR and HER-2 kinase inhibitors. J Med Chem;46:4657-4668.
    • (2003) J Med Chem , vol.46 , pp. 4657-4668
    • Kamath, S.1    Buolamwini, J.K.2
  • 29
    • 0037920567 scopus 로고    scopus 로고
    • Three-dimensional quantitative structure-activity relationship analyses using comparative molecular field analysis and comparative molecular similarity indices analysis to elucidate selectivity differences of inhibitors binding to trypsin, thrombin, and factor Xa
    • Bohm M., Sturzebecher J., Klebe G. (1999) Three-dimensional quantitative structure-activity relationship analyses using comparative molecular field analysis and comparative molecular similarity indices analysis to elucidate selectivity differences of inhibitors binding to trypsin, thrombin, and factor Xa. J Med Chem;42:458-477.
    • (1999) J Med Chem , vol.42 , pp. 458-477
    • Bohm, M.1    Sturzebecher, J.2    Klebe, G.3
  • 30
    • 0027209171 scopus 로고
    • The probability of chance correlation using partial least squares (PLS)
    • Clark M., Cramer R.D. III (1993) The probability of chance correlation using partial least squares (PLS). Quant Struct Act Relat;12:137-145.
    • (1993) Quant Struct Act Relat , vol.12 , pp. 137-145
    • Clark, M.1    Cramer III, R.D.2
  • 31
    • 0001681052 scopus 로고
    • The collinearity problem in linear regression. The partial least squares (PLS) approach to generalized inverses
    • Wold S., Ruhe A., Wold H., Dunn W.J. (1984) The collinearity problem in linear regression. The partial least squares (PLS) approach to generalized inverses. SIAM J Sci Comput;5:735-743.
    • (1984) SIAM J Sci Comput , vol.5 , pp. 735-743
    • Wold, S.1    Ruhe, A.2    Wold, H.3    Dunn, W.J.4
  • 32
    • 0027672324 scopus 로고
    • Sample-distance partial least squares: PLS optimized for many variables, with application to CoMFA
    • Bush B.L., Nachbar R.B. Jr (1993) Sample-distance partial least squares: PLS optimized for many variables, with application to CoMFA. J Comput Aided Mol Des;7:587-619.
    • (1993) J Comput Aided Mol Des , vol.7 , pp. 587-619
    • Bush, B.L.1    Nachbar Jr, R.B.2
  • 33
    • 41949116226 scopus 로고    scopus 로고
    • On some aspects of variable selection forpartial least squares regression models
    • Roy P.P., Roy K. (2008) On some aspects of variable selection forpartial least squares regression models. QSAR Comb Sci;27:302-313.
    • (2008) QSAR Comb Sci , vol.27 , pp. 302-313
    • Roy, P.P.1    Roy, K.2
  • 35
    • 80255140891 scopus 로고    scopus 로고
    • Three-dimensional quantitative structure-activity relationship (3D-QSAR) analysis and molecular docking of ATP-competitive triazine analogs of human mTOR inhibitors
    • Tanneeru K., Reddy B.M., Guruprasad L. (2011) Three-dimensional quantitative structure-activity relationship (3D-QSAR) analysis and molecular docking of ATP-competitive triazine analogs of human mTOR inhibitors. Med Chem Res; doi:.
    • (2011) Med Chem Res
    • Tanneeru, K.1    Reddy, B.M.2    Guruprasad, L.3
  • 36
    • 84861235193 scopus 로고    scopus 로고
    • Ligand-based 3-D pharmacophore generation and molecular docking of mTOR kinase inhibitors
    • Tanneeru K., Guruprasad L. (2011) Ligand-based 3-D pharmacophore generation and molecular docking of mTOR kinase inhibitors. J Mol Model; doi:.
    • (2011) J Mol Model
    • Tanneeru, K.1    Guruprasad, L.2
  • 37
    • 0002370147 scopus 로고
    • Hansch analysis and related approaches
    • QSAR In: Mannhold R., Kroogsgrad-Larsen P., Timmerman H., editors., Weinheim: VCH;
    • QSAR (1993) Hansch analysis and related approaches. In: Mannhold R., Kroogsgrad-Larsen P., Timmerman H., editors. Methods and Principles in Medicinal Chemistry, Vol. 1. Weinheim: VCH; p. 91-107.
    • (1993) Methods and Principles in Medicinal Chemistry , vol.1 , pp. 91-107


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.