Analysis of mucosal mucins separated by SDS-urea agarose polyacrylamide composite gel electrophoresis

Electrophoresis

Volumn 32, Issue 24, 2011, Pages 3554-3563

  Issa, Samah M A ^a   Schulz, Benjamin L ^b   Packer, Nicolle H ^c   Karlsson, Niclas G ^d  

^a NATIONAL UNIVERSITY OF IRELAND   (Ireland)

^b UNIVERSITY OF QUEENSLAND   (Australia)

^c MACQUARIE UNIVERSITY   (Australia)

^d UNIVERSITY OF GOTHENBURG   (Sweden)

Author keywords

Glycomics; Mucin; O linked glycosylation; Software

Indexed keywords

ELECTROPHORESIS; GELS; GLYCOSYLATION; METABOLISM; OLIGOSACCHARIDES; PROTEINS;

AGAROSE; COMPOSITE GELS; GEL ELECTROPHORESIS; GEL-CASTING; GLYCOMICS; GLYCOSYLATIONS; MUCIN; O-LINKED; O-LINKED GLYCOSYLATION; SOFTWARE;

UREA;

MUCIN; OLIGOSACCHARIDE; UREA;

ARTICLE; CARBAMOYLATION; COMPUTER PROGRAM; CONTROLLED STUDY; HIGH THROUGHPUT SCREENING; HUMAN; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLOMICS; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN ANALYSIS; PROTEIN GLYCOSYLATION; ROOM TEMPERATURE; SEPARATION TECHNIQUE; SODIUM DODECYL SULFATE UREA AGAROSE POLYACRYLAMIDE COMPOSITE GEL ELECTROPHORESIS; WESTERN BLOTTING;

EID: 83755220063     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.201100374     Document Type: Article

References (30)

1. Ruddock, L. W., Molinari, M., J. Cell Sci. 2006, 119, 4373-4380.
2. Sola, R. J., Griebenow, K., J. Pharm Sci. 2009, 98, 1223-1245.
3. Takahashi, M., Kuroki, Y., Ohtsubo, K., Taniguchi, N., Carbohydr. Res. 2009, 344, 1387-1390.
4. Kawakubo, M., Ito, Y., Okimura, Y., Kobayashi, M., Sakura, K., Kasama, S., Fukuda, M. N., Fukuda, M., Katsuyama, T., Nakayama, J., Science 2004, 305, 1003-1006.
5. Taylor-Papadimitriou, J., Epenetos, A. A., Trends Biotechnol. 1994, 12, 227-233.
6. Arnold, J. N., Saldova, R., Hamid, U. M., Rudd, P. M., Proteomics 2008, 8, 3284-3293.
7. Campbell, B. J., Yu, L. G., Rhodes, J. M., Glycoconj. J. 2001, 18, 851-858.
8. Schulz, B. L., Sloane, A. J., Robinson, L. J., Sebastian, L. T., Glanville, A. R., Song, Y., Verkman, A. S., Harry, J. L., Packer, N. H., Karlsson, N. G., Biochem. J. 2005, 387, 911-919.
9. Kim, Y. S., Gum, J., Jr., Brockhausen, I., Glycoconj. J. 1996, 13, 693-707.
10. Sperandio, M., Gleissner, C. A., Ley, K., Immunol. Rev. 2009, 230, 97-113.
11. Patsos, G., Corfield, A., Biol. Chem. 2009, 390, 581-590.
12. Lindén, S. K., Sutton, P., Karlsson, N. G., Korolik, V., McGuckin, M. A., Mucosal Immunol. 2008, 1, 183-197.
13. Godl, K., Johansson, M. E., Lidell, M. E., Morgelin, M., Karlsson, H., Olson, F. J., Gum, J. R., Jr., Kim, Y. S., Hansson, G. C., J. Biol. Chem. 2002, 277, 47248-47256.
14. Johansson, M. E., Larsson, J. M., Hansson, G. C., Proc. Natl. Acad. Sci. USA 2011, 108, 4659-4665.
15. Karlsson, N. G., Nordman, H., Karlsson, H., Carlstedt, I., Hansson, G. C., Biochem. J. 1997, 326, 911-917.
16. Zaia, J., Mass Spectrom. Rev. 2004, 23, 161-227.
17. Kuster, B., Wheeler, S. F., Hunter, A. P., Dwek, R. A., Harvey, D. J., Anal. Biochem. 1997, 250, 82-101.
18. Mechref, Y., Kang, P., Novotny, M. V., Methods Mol. Biol. 2009, 534, 53-64.
19. North, S. J., Hitchen, P. G., Haslam, S. M., Dell, A., Current Opin. Struct. Biol. 2009, 19, 498-506.
20. Schulz, B. L., Packer, N. H., Karlsson, N. G., Anal. Chem. 2002, 74, 6088-6097.
21. Nielsen, P. A., Bennett, E. P., Wandall, H. H., Therkildsen, M. H., Hannibal, J., Clausen, H., Glycobiology 1997, 7, 413-419.
22. Veerman, E. C., Bolscher, J. G., Appelmelk, B. J., Bloemena, E., van den Berg, T. K., Nieuw Amerongen, A. V., Glycobiology 1997, 7, 37-43.
23. Haavik, S., Nilsen, M., Thingstad, T., Barsett, H., Renouf, D. V., Hounsell, E. F., Codington, J. F., Glycoconj. J. 1999, 16, 229-236.
24. Craig, R., Beavis, R. C., Bioinformatics 2004, 20, 1466-1467.
25. Holmén, J. M., Karlsson, N. G., Abdullah, L. H., Randell, S. H., Sheehan, J. K., Hansson, G. C., Davis, C. W., Am. J. Physiol. Lung Cell Mol. Physiol. 2004, 287, L824-L834.
26. Pluskal, T., Castillo, S., Villar-Briones, A., Oresic, M., BMC Bioinformatics 2010, 11, 395.
27. Thornton, D. J., Howard, M., Devine, P. L., Sheehan, J. K., Anal. Biochem. 1995, 227, 162-167.
28. Watase, M., Nishinari, K., Williams, P. A., Phillips, G. O., J. Agric. Food Chem. 1990, 38, 1181-1187.
29. McCarthy, J., Hopwood, F., Oxley, D., Laver, M., Castagna, A., Righetti, P. G., Williams, K., Herbert, B., J. Proteome Res. 2003, 2, 239-242.
30. Ligtenberg, A. J., Karlsson, N. G., Veerman, E. C., Int. J. Mol. Sci. 2010, 11, 5212-5233.