Nonsense-mediated mRNA decay factors, UPF1 and UPF3, contribute to plant defense

Plant and Cell Physiology

Volumn 52, Issue 12, 2011, Pages 2147-2156

  Jeong, Hee Jeong ^a   Kim, Young Jin ^a   Kim, Sang Hyon ^b   Kim, Yoon Ha ^c   Lee, In Jung ^c   Kim, Yoon Ki ^a   Shin, Jeong Sheop ^a  

^a Korea University   (South Korea)

^b Myong Ji University   (South Korea)

^c Kyungpook National University   (South Korea)

Author keywords

Arabidopsis; Enhanced disease resistance; NMD defective mutants; Nonsense mediated mRNA decay (NMD); Premature termination codon (PTC); Salicylic acid (SA)

Indexed keywords

ARABIDOPSIS PROTEIN; CYCLOHEXIMIDE; ISOCHORISMATE SYNTHASE; MESSENGER RNA; MUTASE; RNA HELICASE; SALICYLIC ACID; UPF1 PROTEIN, ARABIDOPSIS; UPF3 PROTEIN, ARABIDOPSIS;

ARABIDOPSIS; ARTICLE; DISEASE RESISTANCE; DOWN REGULATION; DRUG EFFECT; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; IMMUNOLOGY; METABOLISM; MICROBIOLOGY; MUTATION; NONSENSE MEDIATED MRNA DECAY; PLANT DISEASE; PLANT GENE; PLANT IMMUNITY; PSEUDOMONAS SYRINGAE;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; CYCLOHEXIMIDE; DISEASE RESISTANCE; DOWN-REGULATION; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; INTRAMOLECULAR TRANSFERASES; MUTATION; NONSENSE MEDIATED MRNA DECAY; PLANT DISEASES; PLANT IMMUNITY; PSEUDOMONAS SYRINGAE; RNA HELICASES; RNA, MESSENGER; SALICYLIC ACID;

EID: 83255176939     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcr144     Document Type: Article

References (27)

1. Arciga-Reyes, L., Wootton, L., Kieffer, M. and Davies, B. (2006) UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis. Plant J. 47: 480-489. (Pubitemid 44036415)
2. Conti, E. and Izaurralde, E. (2005) Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species. Curr. Opin. Cell. Biol. 17: 316-325. (Pubitemid 40719923)
3. Heil, M. and Baldwin, I.T. (2002) Fitness costs of induced resistance: emerging experimental support for a slippery concept. Trends Plant Sci. 7: 61-67. (Pubitemid 36726074)
4. Holbrook, J.A., Neu-Yilik, G., Hentze, M.W. and Kulozik, A.E. (2004) Nonsense-mediated decay approaches the clinic. Nat. Genet. 36: 801-808. (Pubitemid 39014096)
5. Hori, K. and Watanabe, Y. (2005) UPF3 suppresses aberrant spliced mRNA in Arabidopsis. Plant J. 43: 530-540. (Pubitemid 41795138)
6. Johnson, C., Boden, E. and Arias, J. (2003) Salicylic acid and NPR1 induce the recruitment of trans-activating TGA factors to a defense gene promoter in Arabidopsis. Plant Cell 15: 1846-1858. (Pubitemid 37078339)
7. Katagiri, F., Thilmony, R. and He, S.Y. (2002) The Arabidopsis thaliana-Pseudomonas syringae interaction. Arabidopsis Book 20: 1-35.
8. Kim, S.H., Koroleva, O.A., Lewandowska, D., Pendle, A.F., Clark, G.P., Simpson, C.G. et al. (2009) Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell 21: 2045-2057.
9. Kurihara, Y., Matsui, A., Hanada, K., Kawashima, M., Ishida, J., Morosawa, T. et al. (2009) Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis. Proc. Natl Acad. Sci. USA 106: 2453-2458.
10. Li, J., Brader, G., Kariola, T. and Tapio Palva, E. (2006) WRKY70 modulates the selection of signaling pathways in plant defense. Plant J. 46: 477-491.
11. Li, J., Brader, G. and Palva, E.T. (2004) The WRKY70 transcription factor: a node of convergence for jasmonate-mediated and salicylate-mediated signals in plant defense. Plant Cell 16: 319-331. (Pubitemid 38192692)
12. Mao, P., Duan, M., Wei, C. and Li, Y. (2007) WRKY62 transcription factor acts downstream of cytosolic NPR1 and negatively regulates jasmonate-responsive gene expression. Plant Cell Physiol. 48: 833-842. (Pubitemid 47356094)
13. Mou, Z., Fan, W. and Dong, X. (2003) Inducers of plant systemic acquired resistance regulate NPR1 function through redox changes. Cell 113: 935-944. (Pubitemid 36792035)
14. Navarro, L., Zipfel, C., Rowland, O., Keller, I., Robatzek, S., Boller, T. et al. (2004) The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. Plant Physiol. 135: 1113-1128. (Pubitemid 38819053)
15. Nawrath, C., Heck, S., Parinthawong, N. and Metraux, J.P. (2002) EDS5, an essential component of salicylic acid-dependent signaling for disease resistance in Arabidopsis, is a member of the MATE transporter family. Plant Cell 14: 275-286. (Pubitemid 34140411)
16. Pieterse, C.M.J. and van Loon, L. (2004) NPR1: the spider in the web of induced resistance signaling pathways. Curr. Opin. Plant Biol. 7: 456-464. (Pubitemid 38871621)
17. Rebbapragada, I. and Lykke-Andersen, J. (2009) Execution of nonsense-mediated mRNA decay: what defines a substrate? Curr. Opin. Cell Biol 21: 1-9.
18. Rehwinkel, J., Raes, J. and Izaurralde, E. (2006) Nonsense-mediated mRNA decay: target genes and functional diversification of effectors. Trends Biochem. Sci. 31: 639-646. (Pubitemid 44635264)
19. Seskar, M., Shulaev, V. and Raskin, I. (1998) Endogenous methyl sali-cylate in pathogen-inoculated tobacco plants. Plant Physiol. 116: 387-392. (Pubitemid 28503874)
20. Shah, J. (2003) The salicylic acid loop in plant defense. Curr. Opin. Plant Biol. 6: 365-371. (Pubitemid 36964865)
21. Stokes, T.L., Kunkel, B.N. and Richards, E.J. (2002) Epigenetic variation in Arabidopsis disease resistance. Genes Dev. 16: 171-182. (Pubitemid 34075810)
22. van Hoof, A. and Green, P.J. (2006) NMD in plant. In Nonsense-Mediated mRNA Decay. Edited by Maquat, L. pp. 167-172. Landes Bioscience Press, New York.
23. van Verk, M.C., Gatz, C. and Linthorst, H.J.M. (2009) Transcriptional regulation of plant defense responses. Adv. Bot. Re. 51: 397-438.
24. Wang, D., Amornsiripanitch, N. and Dong, X. (2006) A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plants. PLoS Pathog. 2: e123.
25. Wildermuth, M.C., Dewdney, J., Wu, G. and Ausubel, F.M. (2001) Isochorismate synthase is required to synthesize salicylic acid for plant defence. Nature 414: 562-565. (Pubitemid 33131541)
26. Yi, H. and Richards, E.J. (2007) A cluster of disease resistance genes in Arabidopsis is coordinately regulated by transcriptional activation and RNA silencing. Plant Cell 19: 2929-2939. (Pubitemid 350046238)
27. Yoine, M., Ohto, M.A., Onai, K., Mita, S. and NaKamura, K. (2006) The lba1 mutation of UPF1 RNA helicase involved in nonsense-mediated mRNA decay causes pleiotropic phenotypic changes and altered sugar signalling in Arabidopsis. Plant J. 47: 49-62. (Pubitemid 43883013)