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Volumn 25, Issue 23, 2011, Pages 2489-2501

Restriction of histone gene transcription to S phase by phosphorylation of a chromatin boundary protein

Author keywords

Cell cycle; Chromatin; Histone transcription; Kinases; Phosphorylation

Indexed keywords

ADENOSINE TRIPHOSPHATASE; CASEIN KINASE II; CHAPERONE; CYCLIN DEPENDENT KINASE 1; PROTEIN; PROTEIN YTA7; RNA POLYMERASE II; UNCLASSIFIED DRUG;

EID: 82955217679     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.173427.111     Document Type: Article
Times cited : (34)

References (67)
  • 3
    • 21744445074 scopus 로고    scopus 로고
    • The yeast FACT complex has a role in transcriptional initiation
    • Biswas D, Yu Y, Prall M, Formosa T, Stillman DJ. 2005. The yeast FACT complex has a role in transcriptional initiation. Mol Cell Biol 25: 5812-5822.
    • (2005) Mol Cell Biol , vol.25 , pp. 5812-5822
    • Biswas, D.1    Yu, Y.2    Prall, M.3    Formosa, T.4    Stillman, D.J.5
  • 4
    • 33847784791 scopus 로고    scopus 로고
    • Multiple levels of cyclin specificity in cell-cycle control
    • Bloom J, Cross FR. 2007. Multiple levels of cyclin specificity in cell-cycle control. Nat Rev Mol Cell Biol 8: 149-160.
    • (2007) Nat Rev Mol Cell Biol , vol.8 , pp. 149-160
    • Bloom, J.1    Cross, F.R.2
  • 8
    • 0035893314 scopus 로고    scopus 로고
    • Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain
    • Cho EJ, Kobor MS, Kim M, Greenblatt J, Buratowski S. 2001. Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain. Genes & Dev 15: 3319-3329.
    • (2001) Genes & Dev , vol.15 , pp. 3319-3329
    • Cho, E.J.1    Kobor, M.S.2    Kim, M.3    Greenblatt, J.4    Buratowski, S.5
  • 13
    • 0033166338 scopus 로고    scopus 로고
    • A role for transcriptional repressors in targeting the yeast Swi/Snf complex
    • Dimova D, Nackerdien Z, Furgeson S, Eguchi S, Osley MA. 1999. A role for transcriptional repressors in targeting the yeast Swi/Snf complex. Mol Cell 4: 75-83.
    • (1999) Mol Cell , vol.4 , pp. 75-83
    • Dimova, D.1    Nackerdien, Z.2    Furgeson, S.3    Eguchi, S.4    Osley, M.A.5
  • 14
    • 77952088459 scopus 로고    scopus 로고
    • An overview of Cdk1-controlled targets and processes
    • doi:10.1186/1747-1028-5-11
    • Enserink JM, Kolodner RD. 2010. An overview of Cdk1-controlled targets and processes. Cell Div 5: 11. doi:10.1186/1747-1028-5-11.
    • (2010) Cell Div , vol.5 , pp. 11
    • Enserink, J.M.1    Kolodner, R.D.2
  • 15
    • 79958830520 scopus 로고    scopus 로고
    • The Saccharomyces cerevisiae histone chaperone Rtt106 mediates the cell cycle recruitment of SWI/SNF and RSC to the HIR-dependent histone genes
    • doi:10.1371/journal/pone.0021113
    • Ferreira ME, Flaherty K, Prochasson P. 2011. The Saccharomyces cerevisiae histone chaperone Rtt106 mediates the cell cycle recruitment of SWI/SNF and RSC to the HIR-dependent histone genes. PLoS ONE 6: e21113. doi:10.1371/journal/pone.0021113.
    • (2011) PLoS ONE , vol.6
    • Ferreira, M.E.1    Flaherty, K.2    Prochasson, P.3
  • 17
    • 0036964090 scopus 로고    scopus 로고
    • Defects in SPT16 or POB3 (yFACT) in Saccharomyces cerevisiae cause dependence on the Hir/Hpc pathway: Polymerase passage may degrade chromatin structure
    • Formosa T, Ruone S, Adams MD, Olsen AE, Eriksson P, Yu Y, Rhoades AR, Kaufman PD, Stillman DJ. 2002. Defects in SPT16 or POB3 (yFACT) in Saccharomyces cerevisiae cause dependence on the Hir/Hpc pathway: Polymerase passage may degrade chromatin structure. Genetics 162: 1557-1571.
    • (2002) Genetics , vol.162 , pp. 1557-1571
    • Formosa, T.1    Ruone, S.2    Adams, M.D.3    Olsen, A.E.4    Eriksson, P.5    Yu, Y.6    Rhoades, A.R.7    Kaufman, P.D.8    Stillman, D.J.9
  • 19
    • 44149105911 scopus 로고    scopus 로고
    • PHOSIDA (phosphorylation site database): Management, structural and evolutionary investigation, and prediction of phosphosites
    • doi: 10.1186/gb-2007-8-11-r250
    • Gnad F, Ren S, Cox J, Olsen JV, Macek B, Oroshi M, Mann M. 2007. PHOSIDA (phosphorylation site database): Management, structural and evolutionary investigation, and prediction of phosphosites. Genome Biol 8: R250. doi: 10.1186/gb-2007-8-11-r250.
    • (2007) Genome Biol , vol.8
    • Gnad, F.1    Ren, S.2    Cox, J.3    Olsen, J.V.4    Macek, B.5    Oroshi, M.6    Mann, M.7
  • 23
    • 21244491441 scopus 로고    scopus 로고
    • Regulation of histone synthesis and nucleosome assembly
    • Gunjan A, Paik J, Verreault A. 2005. Regulation of histone synthesis and nucleosome assembly. Biochimie 87: 625-635.
    • (2005) Biochimie , vol.87 , pp. 625-635
    • Gunjan, A.1    Paik, J.2    Verreault, A.3
  • 24
    • 0023666061 scopus 로고
    • Histone H2B repression causes cell-cycle-specific arrest in yeast: Effects on chromosomal segregation, replication, and transcription
    • Han M, Chang M, Kim UJ, Grunstein M. 1987. Histone H2B repression causes cell-cycle-specific arrest in yeast: Effects on chromosomal segregation, replication, and transcription. Cell 48: 589-597.
    • (1987) Cell , vol.48 , pp. 589-597
    • Han, M.1    Chang, M.2    Kim, U.J.3    Grunstein, M.4
  • 26
    • 70349546862 scopus 로고    scopus 로고
    • Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution
    • Holt LJ, Tuch BB, Villen J, Johnson AD, Gygi SP, Morgan DO. 2009. Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution. Science 325: 1682-1686.
    • (2009) Science , vol.325 , pp. 1682-1686
    • Holt, L.J.1    Tuch, B.B.2    Villen, J.3    Johnson, A.D.4    Gygi, S.P.5    Morgan, D.O.6
  • 29
    • 34247626968 scopus 로고    scopus 로고
    • A novel role for histone chaperones CAF-1 and Rtt106p in heterochromatin silencing
    • Huang S, Zhou H, Tarara J, Zhang Z. 2007. A novel role for histone chaperones CAF-1 and Rtt106p in heterochromatin silencing. EMBO J 26: 2274-2283.
    • (2007) EMBO J , vol.26 , pp. 2274-2283
    • Huang, S.1    Zhou, H.2    Tarara, J.3    Zhang, Z.4
  • 30
    • 70349774419 scopus 로고    scopus 로고
    • Dual regulation by pairs of cyclin-dependent protein kinases and histone deacetylases controls G1 transcription in budding yeast
    • doi:10.1371/journal.pbio.1000188
    • Huang D, Kaluarachchi S, van Dyk D, Friesen H, Sopko R, Ye W, Bastajian N, Moffat J, Sassi H, Costanzo M, et al. 2009. Dual regulation by pairs of cyclin-dependent protein kinases and histone deacetylases controls G1 transcription in budding yeast. PLoS Biol 7: e1000188. doi:10.1371/journal.pbio.1000188.
    • (2009) PLoS Biol , vol.7
    • Huang, D.1    Kaluarachchi, S.2    van Dyk, D.3    Friesen, H.4    Sopko, R.5    Ye, W.6    Bastajian, N.7    Moffat, J.8    Sassi, H.9    Costanzo, M.10
  • 31
    • 78549291781 scopus 로고    scopus 로고
    • ANCCA/ATAD2 overexpression identifies breast cancer patients with poor prognosis, acting to drive proliferation and survival of triple-negative cells through control of B-Myb and EZH2
    • Kalashnikova EV, Revenko AS, Gemo AT, Andrews NP, Tepper CG, Zou JX, Cardiff RD, Borowsky AD, Chen HW. 2010. ANCCA/ATAD2 overexpression identifies breast cancer patients with poor prognosis, acting to drive proliferation and survival of triple-negative cells through control of B-Myb and EZH2. Cancer Res 70: 9402-9412.
    • (2010) Cancer Res , vol.70 , pp. 9402-9412
    • Kalashnikova, E.V.1    Revenko, A.S.2    Gemo, A.T.3    Andrews, N.P.4    Tepper, C.G.5    Zou, J.X.6    Cardiff, R.D.7    Borowsky, A.D.8    Chen, H.W.9
  • 32
    • 1542290655 scopus 로고    scopus 로고
    • Transitions in RNA polymerase II elongation complexes at the 39 ends of genes
    • Kim M, Ahn SH, Krogan NJ, Greenblatt JF, Buratowski S. 2004. Transitions in RNA polymerase II elongation complexes at the 39 ends of genes. EMBO J 23: 354-364.
    • (2004) EMBO J , vol.23 , pp. 354-364
    • Kim, M.1    Ahn, S.H.2    Krogan, N.J.3    Greenblatt, J.F.4    Buratowski, S.5
  • 35
    • 58149308056 scopus 로고    scopus 로고
    • Cdk1/Cdc28-dependent activation of the major triacylglycerol lipase Tgl4 in yeast links lipolysis to cell-cycle progression
    • Kurat CF, Wolinski H, Petschnigg J, Kaluarachchi S, Andrews B, Natter K, Kohlwein SD. 2009. Cdk1/Cdc28-dependent activation of the major triacylglycerol lipase Tgl4 in yeast links lipolysis to cell-cycle progression. Mol Cell 33: 53-63.
    • (2009) Mol Cell , vol.33 , pp. 53-63
    • Kurat, C.F.1    Wolinski, H.2    Petschnigg, J.3    Kaluarachchi, S.4    Andrews, B.5    Natter, K.6    Kohlwein, S.D.7
  • 36
    • 66149100528 scopus 로고    scopus 로고
    • A novel proteomics approach for the discovery of chromatinassociated protein networks
    • Lambert JP, Mitchell L, Rudner A, Baetz K, Figeys D. 2009. A novel proteomics approach for the discovery of chromatinassociated protein networks. Mol Cell Proteomics 8: 870-882.
    • (2009) Mol Cell Proteomics , vol.8 , pp. 870-882
    • Lambert, J.P.1    Mitchell, L.2    Rudner, A.3    Baetz, K.4    Figeys, D.5
  • 38
    • 0034671792 scopus 로고    scopus 로고
    • Global analysis of the genetic network controlling a bacterial cell cycle
    • Laub MT, McAdams HH, Feldblyum T, Fraser CM, Shapiro L. 2000. Global analysis of the genetic network controlling a bacterial cell cycle. Science 290: 2144-2148.
    • (2000) Science , vol.290 , pp. 2144-2148
    • Laub, M.T.1    McAdams, H.H.2    Feldblyum, T.3    Fraser, C.M.4    Shapiro, L.5
  • 40
    • 14544270984 scopus 로고    scopus 로고
    • Cyclin specificity in the phosphorylation of cyclin-dependent kinase substrates
    • Loog M, Morgan DO. 2005. Cyclin specificity in the phosphorylation of cyclin-dependent kinase substrates. Nature 434: 104-108.
    • (2005) Nature , vol.434 , pp. 104-108
    • Loog, M.1    Morgan, D.O.2
  • 43
    • 0242579933 scopus 로고    scopus 로고
    • The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo
    • Mason PB, Struhl K. 2003. The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo. Mol Cell Biol 23: 8323-8333.
    • (2003) Mol Cell Biol , vol.23 , pp. 8323-8333
    • Mason, P.B.1    Struhl, K.2
  • 44
    • 0037334895 scopus 로고    scopus 로고
    • One-thousand-and-one substrates of protein kinase CK2?
    • Meggio F, Pinna LA. 2003. One-thousand-and-one substrates of protein kinase CK2? FASEB J 17: 349-368.
    • (2003) FASEB J , vol.17 , pp. 349-368
    • Meggio, F.1    Pinna, L.A.2
  • 45
    • 0031737085 scopus 로고    scopus 로고
    • Regulation of Cdc28 cyclindependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae
    • Mendenhall MD, Hodge AE. 1998. Regulation of Cdc28 cyclindependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae. Microbiol Mol Biol Rev 62: 1191-1243.
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 1191-1243
    • Mendenhall, M.D.1    Hodge, A.E.2
  • 46
    • 0031466305 scopus 로고    scopus 로고
    • Cyclin-dependent kinases: Engines, clocks, and microprocessors
    • Morgan DO. 1997. Cyclin-dependent kinases: Engines, clocks, and microprocessors. Annu Rev Cell Dev Biol 13: 261-291.
    • (1997) Annu Rev Cell Dev Biol , vol.13 , pp. 261-291
    • Morgan, D.O.1
  • 48
    • 0036205048 scopus 로고    scopus 로고
    • Genome-wide location and regulated recruitment of the RSC nucleosomeremodeling complex
    • Ng HH, Robert F, Young RA, Struhl K. 2002. Genome-wide location and regulated recruitment of the RSC nucleosomeremodeling complex. Genes Dev 16: 806-819.
    • (2002) Genes Dev , vol.16 , pp. 806-819
    • Ng, H.H.1    Robert, F.2    Young, R.A.3    Struhl, K.4
  • 50
    • 0032498273 scopus 로고    scopus 로고
    • FACT, a factor that facilitates transcript elongation through nucleosomes
    • Orphanides G, LeRoy G, Chang CH, Luse DS, Reinberg D. 1998. FACT, a factor that facilitates transcript elongation through nucleosomes. Cell 92: 105-116.
    • (1998) Cell , vol.92 , pp. 105-116
    • Orphanides, G.1    Leroy, G.2    Chang, C.H.3    Luse, D.S.4    Reinberg, D.5
  • 51
    • 0033566129 scopus 로고    scopus 로고
    • The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins
    • Orphanides G, Wu WH, Lane WS, Hampsey M, Reinberg D. 1999. The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins. Nature 400: 284-288.
    • (1999) Nature , vol.400 , pp. 284-288
    • Orphanides, G.1    Wu, W.H.2    Lane, W.S.3    Hampsey, M.4    Reinberg, D.5
  • 52
    • 0023478786 scopus 로고
    • Trans-acting regulatory mutations that alter transcription of Saccharomyces cerevisiae histone genes
    • Osley MA, Lycan D. 1987. Trans-acting regulatory mutations that alter transcription of Saccharomyces cerevisiae histone genes. Mol Cell Biol 7: 4204-4210.
    • (1987) Mol Cell Biol , vol.7 , pp. 4204-4210
    • Osley, M.A.1    Lycan, D.2
  • 53
    • 0023055514 scopus 로고
    • Identification of sequences in a yeast histone promoter involved in periodic transcription
    • Osley MA, Gould J, Kim S, Kane MY, Hereford L. 1986. Identification of sequences in a yeast histone promoter involved in periodic transcription. Cell 45: 537-544.
    • (1986) Cell , vol.45 , pp. 537-544
    • Osley, M.A.1    Gould, J.2    Kim, S.3    Kane, M.Y.4    Hereford, L.5
  • 54
    • 0034599529 scopus 로고    scopus 로고
    • Histone H2A is required for normal centromere function in Saccharomyces cerevisiae
    • Pinto I, Winston F. 2000. Histone H2A is required for normal centromere function in Saccharomyces cerevisiae. EMBO J 19: 1598-1612.
    • (2000) EMBO J , vol.19 , pp. 1598-1612
    • Pinto, I.1    Winston, F.2
  • 55
    • 27644470214 scopus 로고    scopus 로고
    • The HIR corepressor complex binds to nucleosomes generating a distinct protein/DNA complex resistant to remodeling by SWI/SNF
    • Prochasson P, Florens L, Swanson SK, Washburn MP, Workman JL. 2005. The HIR corepressor complex binds to nucleosomes generating a distinct protein/DNA complex resistant to remodeling by SWI/SNF. Genes Dev 19: 2534-2539.
    • (2005) Genes Dev , vol.19 , pp. 2534-2539
    • Prochasson, P.1    Florens, L.2    Swanson, S.K.3    Washburn, M.P.4    Workman, J.L.5
  • 57
    • 8644287437 scopus 로고    scopus 로고
    • Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II
    • Schwabish MA, Struhl K. 2004. Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II. Mol Cell Biol 24: 10111-10117.
    • (2004) Mol Cell Biol , vol.24 , pp. 10111-10117
    • Schwabish, M.A.1    Struhl, K.2
  • 58
    • 68249119759 scopus 로고    scopus 로고
    • Prolyl isomerase Pin1 acts as a switch to control the degree of substrate ubiquitylation
    • Siepe D, Jentsch S. 2009. Prolyl isomerase Pin1 acts as a switch to control the degree of substrate ubiquitylation. Nat Cell Biol 11: 967-972.
    • (2009) Nat Cell Biol , vol.11 , pp. 967-972
    • Siepe, D.1    Jentsch, S.2
  • 59
    • 34547499407 scopus 로고    scopus 로고
    • Proteome- wide identification of in vivo targets of DNA damage checkpoint kinases
    • Smolka MB, Albuquerque CP, Chen SH, Zhou H. 2007. Proteome- wide identification of in vivo targets of DNA damage checkpoint kinases. Proc Natl Acad Sci 104: 10364-10369.
    • (2007) Proc Natl Acad Sci , vol.104 , pp. 10364-10369
    • Smolka, M.B.1    Albuquerque, C.P.2    Chen, S.H.3    Zhou, H.4
  • 63
    • 18344386042 scopus 로고    scopus 로고
    • Cell cycle-dependent transcription in yeast: Promoters, transcription factors, and transcriptomes
    • Wittenberg C, Reed SI. 2005. Cell cycle-dependent transcription in yeast: Promoters, transcription factors, and transcriptomes. Oncogene 24: 2746-2755.
    • (2005) Oncogene , vol.24 , pp. 2746-2755
    • Wittenberg, C.1    Reed, S.I.2
  • 64
    • 18844413266 scopus 로고    scopus 로고
    • Acetylation in histone H3 globular domain regulates gene expression in yeast
    • Xu F, Zhang K, Grunstein M. 2005. Acetylation in histone H3 globular domain regulates gene expression in yeast. Cell 121: 375-385.
    • (2005) Cell , vol.121 , pp. 375-385
    • Xu, F.1    Zhang, K.2    Grunstein, M.3
  • 65
    • 0242468997 scopus 로고    scopus 로고
    • The cyclin E/Cdk2 substrate p220(NPAT) is required for S-phase entry, histone gene expression, and Cajal body maintenance in human somatic cells
    • Ye X, Wei Y, Nalepa G, Harper JW. 2003. The cyclin E/Cdk2 substrate p220(NPAT) is required for S-phase entry, histone gene expression, and Cajal body maintenance in human somatic cells. Mol Cell Biol 23: 8586-8600.
    • (2003) Mol Cell Biol , vol.23 , pp. 8586-8600
    • Ye, X.1    Wei, Y.2    Nalepa, G.3    Harper, J.W.4
  • 66
    • 0032520093 scopus 로고    scopus 로고
    • Expression of NPAT, a novel substrate of cyclin E-CDK2, promotes S-phase entry
    • Zhao J, Dynlacht B, Imai T, Hori T, Harlow E. 1998. Expression of NPAT, a novel substrate of cyclin E-CDK2, promotes S-phase entry. Genes Dev 12: 456-461.
    • (1998) Genes Dev , vol.12 , pp. 456-461
    • Zhao, J.1    Dynlacht, B.2    Imai, T.3    Hori, T.4    Harlow, E.5


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