Escherichia coli diversity in livestock manures and agriculturally impacted stream waters

Current Microbiology

Volumn 63, Issue 5, 2011, Pages 439-449

  Cook, Kimberly L ^a   Bolster, Carl H ^a   Ayers, Kati A ^b   Reynolds, Dale N ^c  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b WESTERN KENTUCKY UNIVERSITY   (United States)

^c Kentucky Division of Water   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL TOXIN; WATER;

AGN43 GENE; AGRICULTURE; ARTICLE; BACTERIAL GENE; BACTERIAL MEMBRANE; BACTERIUM ADHERENCE; CONTROLLED STUDY; DAIRY CATTLE; ECOLOGY; ESCHERICHIA COLI; FIMH GENE; GENE EXPRESSION PROFILING; GENE TRANSFER; GENOTYPE; IHA GENE; IRON GENE; LIVESTOCK; MANURE; MICROBIAL DIVERSITY; NONHUMAN; PHENOTYPE; PHYLOGENY; POLYMERASE CHAIN REACTION; POULTRY; PRIORITY JOURNAL; SEASONAL VARIATION; SWINE; TRAT GENE; WATER SUPPLY;

ANIMALS; BACTERIAL PROTEINS; BACTERIAL TOXINS; BIODIVERSITY; ESCHERICHIA COLI; FRESH WATER; LIVESTOCK; MANURE; PHYLOGENY;

ESCHERICHIA COLI; SUIDAE;

EID: 82755182746     PISSN: 03438651     EISSN: 14320991     Source Type: Journal    
DOI: 10.1007/s00284-011-0002-6     Document Type: Article

References (32)

1. Badgley BD, Ferguson J, Heuvel AV, Kleinheinz GT, McDermott CM, Sandrin TR, Kinzelman J, Junion EA, Byappanahalli MN, Whitman RL, Sadowsky MJ (2011) Multi-scale temporal and spatial variation in genotypic composition of Cladophoraborne Escherichia coli populations in Lake Michigan. Water Res 45:721-731
2. Bolster CH, Hazendaroglu BZ, Walk ST (2009) Diversity in cell properties and transport behavior among 12 different environmental Escherichia coli isolates. J Environ Qual 38:465-472
3. Bolster CH, Cook KL, Marcus IM, Haznedaroglu BZ, Walker SL (2010) Correlating transport behavior with cell properties for eight porcine Escherichia coli isolates. Environ Sci Technol 44:5008-5014
4. Casarez EA, Pillai SD, Di Giovanni GD (2007) Genotype diversity of Escherichia coli isolates in natural waters determined by PFGE and ERIC-PCR. Water Res 41:3643-3648 (Pubitemid 47176107)
5. Chapman T, Wu X-Y, Barchia I, Bettelheim KA, Driesen S, Trott D, Wilson M, Chin JJ-C (2006) Comparison of virulence gene profiles of Escherichia coli strains isolated from healthy and diarrheic swine. Appl Environ Microbiol 72:4782-4795 (Pubitemid 44078805)
6. Clermont O, Bonacorsi S, Bingen E (2000) Rapid and simple determination of the Escherichia coli phylogenetic group. Appl Environ Microbiol 66:4555-4558
7. Dombek PE, Johnson LK, Zimmerley ST, Sadowski MJ (2000) Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources. Appl Environ Microbiol 66:2572-2577 (Pubitemid 30353967)
8. Duriez P, Topp E (2007) Temporal dynamics and impact of manure storage on antibiotic resistance patterns and population structure of Escherichia coli isolates from a commercial swine farm. Appl Environ Microbiol 73:5486-5493 (Pubitemid 47378752)
9. Ewers C, Antao E-M, Diehl I, Philipp H-C, Wieler LH (2009) Intestine and environment of the chicken as reservoirs for extraintestinal pathogenic Escherichia coli strains with zoonotic potential. Appl Environ Microbiol 75:184-192
10. Foppen JW, Liem Y, Schijven J (2008) Effect of humic acid on the attachment of Escherichia coli in columns of goethite-coated sand. Water Res 42:211-219 (Pubitemid 350296221)
11. Foppen JW, Lutterodt G, Röling WFM, Uhlenbrook S (2010) Towards understanding inter-strain attachment variations of Escherichia coli during transport in saturated quartz sand. Water Res 44:1202-1212
12. Frahm E, Obst U (2003) Application of fluorogen probe technique (Taqman PCR) to the detection of Enterococcus spp. and Escherichia coli in water samples. J Microbiol Met 52:123-131 (Pubitemid 35238057)
13. Hamilton MJ, Hadi AZ, Griffith JF, Ishii S, Sadowski MJ (2010) Large scale analysis of virulence genes in Escherichia coli strains isolates from Avalon Bay, CA. Water Res 44:5463-5473
14. Higgins J, Hohn C, Hornor S, Frana M, Denver M, Joerger R (2007) Genotyping of Escherichia coli from environmental and animal samples. J Microbiol Methods 70:227-235 (Pubitemid 47198128)
15. Ishii S, Ksoll WB, Hicks RE, Sadowsky MJ (2006) Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds. Appl Environ Microbiol 72:612-621
16. Lu Z, Lapen D, Scott A, Dang A, Topp E (2005) Identifying host sources of fecal pollution: diversity of Escherichia coli in confined dairy and swine production systems. Appl Environ Microbiol 71:5992-5998 (Pubitemid 41456893)
17. Luna GM, Vignaroli C, Rinaldi C, Pusceddu A, Nicoletti L, Gabellini M, Danovaro R, Biavasco F (2010) Extraintestinal Escherichia coli carrying virulence genes in coastal sediments. Appl Environ Microbiol 76:5659-5668
18. Lyautey E, Lu Z, Lapen DR, Wilkes G, Scott A, Berkers T, Edge TA, Topp E (2010) Distribution and diversity of Escherichia coli populations in the South Nation River Drainage basin, eastern Ontario Canada. Appl Environ Microbiol 76:1486-1496
19. Ma H, Pedel J, Fife P, Johnson WP (2009) Hemispheres-in-cell geometry to predict colloid deposition in porous media. Environ Sci Technol 43:8573-8579
20. Maldonado Y, Fiser JC, Nakatsu CH, Bhunia AK (2005) Cytotoxicity potential and genotypic characterization of Escherichia coli isolates from environmental and food sources. Appl Environ Microbiol 71:1890-1898 (Pubitemid 40546109)
21. McLellan SL (2004) Genetic diversity of Escherichia coli isolated from urban rivers and beach water. Appl Environ Microbiol 70:4658-4665 (Pubitemid 39095489)
22. Naves P, del Prado G, Huelves L, Gracia M, Ruiz V, Blanco J, Dahbi G, Blanco M, del Carmen Ponte M, Soriano F (2008) Correlation between virulence factors and in vitro biofilm formation by Escherichia coli strains. Microbial Path 45:86-91
23. Patton A, Patton J (1998) Detection and characterization of shiga toxigenic Escherichia coli by using multiplex PCR assays fro stx1, stx2, eaeA, Enterohemorrhagic E. coli hlyA, rfb0111, and rfb0157. J Clinical Microbiol 36:598-602
24. Ratajczak M, Laroche E, Berthe T, Clermont O, Pawlak B, Denamur E (2010) Influence of hydrological conditions on the Escherichia coli population structure in the water of a creek on a rural watershed. BMC Microbiol 10:1-10
25. Redman JA, Walker SL, Elimelech M (2004) Bacterial adhesion and transport in porous media: role of the secondary energy minimum. Environ Sci Technol 38:1777-1785 (Pubitemid 38364926)
26. Schembri MA, Dalsgaard D, Klemm P (2004) Capsule shields the function of short bacterial adhesins. J Bacteriol 186:1249-1257 (Pubitemid 38248713)
27. Sherlock O, Dobrindt U, Jensen JB, Vejborg RM, Klemm P (2006) Glycosylation of the self-recognizing Escherichia coli Ag43 autotransporter protein. Appl Environ Microbiol 188:1798-1807 (Pubitemid 43346858)
28. Son I, Van Kessel JS, Karns JS (2009) Genotypic diversity of Escherichia coli in a dairy farm. Foodborne Pathog Dis 6:837-847
29. Tarr PI, Bilge SS, Vary JCJ, Jelacic S, Habeeb RL, Ward TR, Baylor MR, Besser TE (2000) Iha: a novel Escherichia coli O157:H7 adherence-conferring molecule encoded on a recently acquired chromosomal island of conserved structure. Infect Immun 68:1400-1407 (Pubitemid 30108537)
30. Van Houdt R, Michiels CW (2005) Role of bacterial cell surface structures in Escherichia coli biofilm formation. Res Microbiol 156:626-633 (Pubitemid 40798502)
31. Wu X-Y, Chapman T, Trott D, Bettelheim KA, Do TN, Driesen S, Walker MJ, Chin J (2007) Comparative analysis of virulence genes, genetic diversity and phylogeny of commensal and enterotoxigenic Escherichia coli isolates from weaned pigs. Appl Environ Microbiol 73:83-91 (Pubitemid 46079938)
32. Yang H-H, Vinopal RT, Grasson D, Smets BF (2004) High diversity among environmental Escherichia coli isolates from a bovine feedlot. Appl Environ Microbiol 70:1528-1536 (Pubitemid 38365135)