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Volumn 70, Issue 8, 2004, Pages 4658-4665

Genetic diversity of Escherichia coli isolated from urban rivers and beach water

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; COASTAL ZONES; ECOLOGY; ENVIRONMENTAL IMPACT; ESCHERICHIA COLI; POLLUTION; RIVERS; SANITARY SEWERS; SEWAGE; STRAIN MEASUREMENT;

EID: 4143079488     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.70.8.4658-4665.2004     Document Type: Article
Times cited : (107)

References (41)
  • 3
    • 0034126848 scopus 로고    scopus 로고
    • Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes
    • Bernhard, A. E., and K. G. Fields. 2000. Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes. Appl. Environ. Microbiol. 66:1587-1594.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 1587-1594
    • Bernhard, A.E.1    Fields, K.G.2
  • 4
    • 0037442386 scopus 로고    scopus 로고
    • Tiered approach for identification of a human fecal pollution source at a recreational beach: Case study at Avalon Bay, Catalina Island, California
    • Boehm, A. B., J. A. Fuhrman, R. D. Mrse, and S. B. Grant. 2003. Tiered approach for identification of a human fecal pollution source at a recreational beach: case study at Avalon Bay, Catalina Island, California. Environ. Sci. Technol. 37:673-680.
    • (2003) Environ. Sci. Technol. , vol.37 , pp. 673-680
    • Boehm, A.B.1    Fuhrman, J.A.2    Mrse, R.D.3    Grant, S.B.4
  • 5
    • 0035986550 scopus 로고    scopus 로고
    • F-specific RNA coliphages: Occurrence, types, and survival in natural waters
    • Brion, G. M., J. S. Meschke, and M. D. Sobsey. 2002. F-specific RNA coliphages: occurrence, types, and survival in natural waters. Water Res. 36:2419-2425.
    • (2002) Water Res. , vol.36 , pp. 2419-2425
    • Brion, G.M.1    Meschke, J.S.2    Sobsey, M.D.3
  • 6
    • 0041528344 scopus 로고    scopus 로고
    • Ubiquity and persistence of Escherichia coli in a Midwestern coastal stream
    • Byappanahalli, M., M. Fowler, D. Shively, and R. Whitman. 2003. Ubiquity and persistence of Escherichia coli in a Midwestern coastal stream. Appl. Environ. Microbiol. 69:4549-4555.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 4549-4555
    • Byappanahalli, M.1    Fowler, M.2    Shively, D.3    Whitman, R.4
  • 7
    • 0035320662 scopus 로고    scopus 로고
    • Identification of fecal Escherichia coli from humans and animals by ribotyping
    • Carson, C. A., B. L. Shear, M. R. Ellersieck, and A. Asfaw. 2001. Identification of fecal Escherichia coli from humans and animals by ribotyping. Appl. Environ. Microbiol. 67:1503-1507.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 1503-1507
    • Carson, C.A.1    Shear, B.L.2    Ellersieck, M.R.3    Asfaw, A.4
  • 8
    • 0037337209 scopus 로고    scopus 로고
    • Comparison of ribotying and repetitive extragenic palindromic-PCR for identification of fecal Escherichia coli from humans and animals
    • Carson, C. A., B. L. Shear, M. R. Ellersieck, and J. D. Schnell. 2003. Comparison of ribotying and repetitive extragenic palindromic-PCR for identification of fecal Escherichia coli from humans and animals. Appl. Environ. Microbiol. 69:1836-1839.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1836-1839
    • Carson, C.A.1    Shear, B.L.2    Ellersieck, M.R.3    Schnell, J.D.4
  • 9
    • 0242489236 scopus 로고    scopus 로고
    • Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters
    • Cole, D., S. C. Long, and M. D. Sobsey. 2003. Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters. Appl. Environ. Microbiol. 69:6507-6514.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 6507-6514
    • Cole, D.1    Long, S.C.2    Sobsey, M.D.3
  • 10
    • 0027451903 scopus 로고
    • Phenotypic identification of the genus Enterococcus and differentiation of phylogenetically distinct enterococcal species and species groups
    • Devriese, L. A., B. Pot, and M. D. Collins. 1993. Phenotypic identification of the genus Enterococcus and differentiation of phylogenetically distinct enterococcal species and species groups. J. Appl. Bacteriol. 75:399-408.
    • (1993) J. Appl. Bacteriol. , vol.75 , pp. 399-408
    • Devriese, L.A.1    Pot, B.2    Collins, M.D.3
  • 11
    • 0034130242 scopus 로고    scopus 로고
    • Use of repetitive sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources
    • Dombek, P. E., L. K. Johnson, S. T. Zimmerley, and M. J. Sadowsky. 2000. Use of repetitive sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources. Appl. Environ. Microbiol, 66:2572-2577.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2572-2577
    • Dombek, P.E.1    Johnson, L.K.2    Zimmerley, S.T.3    Sadowsky, M.J.4
  • 12
    • 0037541053 scopus 로고    scopus 로고
    • Abundance and characteristics of the recreational water quality indicator bacteria Escherichia coli and enterococci in gull feces
    • Fogary, L. R., S. K. Haack, M. J. Wolcott, and R. L. Whitman. 2003. Abundance and characteristics of the recreational water quality indicator bacteria Escherichia coli and enterococci in gull feces. Appl. Environ. Microbiol. 94:865-878.
    • (2003) Appl. Environ. Microbiol. , vol.94 , pp. 865-878
    • Fogary, L.R.1    Haack, S.K.2    Wolcott, M.J.3    Whitman, R.L.4
  • 13
    • 0345183500 scopus 로고    scopus 로고
    • Microbial indicators of water quality
    • C. J. Hurst, R. L. Crawford, G. R. Knudsen, M. J. Mclnerney, and L. D. Stetzenbach (ed.). ASM Press, Washington, D.C.
    • Fujioka, R. S. 2002. Microbial indicators of water quality, p. 234-243. In C. J. Hurst, R. L. Crawford, G. R. Knudsen, M. J. Mclnerney, and L. D. Stetzenbach (ed.), Manual of environmental microbiology, 2nd ed. ASM Press, Washington, D.C
    • (2002) Manual of Environmental Microbiology, 2nd Ed. , pp. 234-243
    • Fujioka, R.S.1
  • 14
    • 0034996147 scopus 로고    scopus 로고
    • Geographical structure and host specificity in bacteria and the implications for tracing the source of coliform contamination
    • Gordon, D. M. 2001. Geographical structure and host specificity in bacteria and the implications for tracing the source of coliform contamination. Microbiology 147:1079-1085.
    • (2001) Microbiology , vol.147 , pp. 1079-1085
    • Gordon, D.M.1
  • 15
    • 0036264202 scopus 로고    scopus 로고
    • The genetic structure of Escherichia coli populations in primary and secondary habitats
    • Gordon, D. M., S. Bauer, and J. R. Johnson. 2002. The genetic structure of Escherichia coli populations in primary and secondary habitats. Microbiology 148:1513-1522.
    • (2002) Microbiology , vol.148 , pp. 1513-1522
    • Gordon, D.M.1    Bauer, S.2    Johnson, J.R.3
  • 17
    • 0036272875 scopus 로고    scopus 로고
    • Development of a procedure for discriminating among Escherichia coli isolates from animal and human sources
    • Guan, S., R. Xu, S. Chen, J. Odumeru, and C. Gyles. 2002. Development of a procedure for discriminating among Escherichia coli isolates from animal and human sources. Appl. Environ. Microbiol. 68:2690-2698.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2690-2698
    • Guan, S.1    Xu, R.2    Chen, S.3    Odumeru, J.4    Gyles, C.5
  • 19
    • 0033831590 scopus 로고    scopus 로고
    • Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: Use in predicting the source of fecal contamination in subtropical waters
    • Harwood, V. J., J. Whitlock, and V. Withington. 2000. Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: use in predicting the source of fecal contamination in subtropical waters. Appl. Environ. Microbiol. 66:3698-3704.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3698-3704
    • Harwood, V.J.1    Whitlock, J.2    Withington, V.3
  • 20
    • 0035163073 scopus 로고    scopus 로고
    • Human adenoviruses and coliphages in urban runoff-impacted coastal waters of Southern California
    • Jiang, S., R. Noble, and W. Chu. 2001. Human adenoviruses and coliphages in urban runoff-impacted coastal waters of Southern California. Appl. Environ. Microbiol. 67:179-184.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 179-184
    • Jiang, S.1    Noble, R.2    Chu, W.3
  • 22
    • 0037992680 scopus 로고    scopus 로고
    • Evidence for localized bacterial loading as the cause of chronic beach closings in a freshwater marina
    • McLellan, S. L., and A. K. Salmore. 2003. Evidence for localized bacterial loading as the cause of chronic beach closings in a freshwater marina. Water Res. 37:2700-2708.
    • (2003) Water Res. , vol.37 , pp. 2700-2708
    • McLellan, S.L.1    Salmore, A.K.2
  • 23
    • 0038221147 scopus 로고    scopus 로고
    • Genetic characterization of Escherichia coli populations of host sources of fecal pollution by using DNA fingerprinting
    • McLellan, S. L., A. D. Daniels, and A. K. Salmore. 2003. Genetic characterization of Escherichia coli populations of host sources of fecal pollution by using DNA fingerprinting. Appl. Environ. Microbiol. 69:2587-2594.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2587-2594
    • McLellan, S.L.1    Daniels, A.D.2    Salmore, A.K.3
  • 24
    • 0030807132 scopus 로고    scopus 로고
    • Recombination and population structure in Escherichia coli
    • Milkman, R. 1997. Recombination and population structure in Escherichia coli. Genetics 46:745-750.
    • (1997) Genetics , vol.46 , pp. 745-750
    • Milkman, R.1
  • 25
    • 0002877624 scopus 로고    scopus 로고
    • Waterborne transmission of infectious agents
    • C. J. Hurst, R. L. Crawford, G. R. Knudsen, M. J. Mclnerney, and L. D. Stetzenbach (ed.). ASM Press, Washington, D.C.
    • Moe, C. 2002. Waterborne transmission of infectious agents, p. 184-204. In C. J. Hurst, R. L. Crawford, G. R. Knudsen, M. J. Mclnerney, and L. D. Stetzenbach (ed.), Manual of environmental microbiology, 2nd ed. ASM Press, Washington, D.C.
    • (2002) Manual of Environmental Microbiology, 2nd Ed. , pp. 184-204
    • Moe, C.1
  • 26
    • 0026748427 scopus 로고
    • Detection and disinfection of pathogens in storm-generated flow
    • O'Shea, M. L., and R. Field. 1992. Detection and disinfection of pathogens in storm-generated flow. Can. J. Microbiol. 38:267-276.
    • (1992) Can. J. Microbiol. , vol.38 , pp. 267-276
    • O'Shea, M.L.1    Field, R.2
  • 27
    • 0032974775 scopus 로고    scopus 로고
    • Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and nonhuman sources of fecal pollution
    • Parveen, S., K. M. Portier, K. Robinson, L. Edmiston, and M. L. Tamplin. 1999. Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and nonhuman sources of fecal pollution. Appl. Environ. Microbiol. 65:3142-3147.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3142-3147
    • Parveen, S.1    Portier, K.M.2    Robinson, K.3    Edmiston, L.4    Tamplin, M.L.5
  • 28
    • 0002924916 scopus 로고    scopus 로고
    • Characterization and classification of microbes by rep-PCR genomic fingerprinting and computer assisted pattern analysis
    • G. Gaetano-Anolles and P. M. Gresshoff (ed.). J. Wiley & Sons, New York, N.Y.
    • Rademaker, J. L. W., and F. J. de Bruijn. 1997. Characterization and classification of microbes by rep-PCR genomic fingerprinting and computer assisted pattern analysis, p. 151-171. In G. Gaetano-Anolles and P. M. Gresshoff (ed.), DNA markers: protocols, applications, and overviews. J. Wiley & Sons, New York, N.Y.
    • (1997) DNA Markers: Protocols, Applications, and Overviews , pp. 151-171
    • Rademaker, J.L.W.1    De Bruijn, F.J.2
  • 29
    • 0037313120 scopus 로고    scopus 로고
    • Geographical variation in ribotype profiles of Escherichia coli isolates from humans, swine, poultry, beef, and dairy cattle in Florida
    • Scott, T. M., S. Parveen, K. M. Portier, J. B. Rose, M. L. Tamplin, S. R. Farrah, A. Koo, and J. Lukasik. 2003. Geographical variation in ribotype profiles of Escherichia coli isolates from humans, swine, poultry, beef, and dairy cattle in Florida. Appl. Environ. Microbiol. 69:1089-1092.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1089-1092
    • Scott, T.M.1    Parveen, S.2    Portier, K.M.3    Rose, J.B.4    Tamplin, M.L.5    Farrah, S.R.6    Koo, A.7    Lukasik, J.8
  • 30
    • 0001292973 scopus 로고
    • Genetic structure and variation in natural populations of Escherichia coli
    • F. C. Neidhardt, J. L. Ingraham, K. B. Low, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.). American Society for Microbiology, Washington, D.C.
    • Selender, R. K., D. A. Caugant, and T. S. Whittam. 1987. Genetic structure and variation in natural populations of Escherichia coli, p. 1625-1648. In F. C. Neidhardt, J. L. Ingraham, K. B. Low, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella typhimurium cellular and molecular biology, vol. 2. American Society for Microbiology, Washington, D.C.
    • (1987) Escherichia coli and Salmonella typhimurium Cellular and Molecular Biology , vol.2 , pp. 1625-1648
    • Selender, R.K.1    Caugant, D.A.2    Whittam, T.S.3
  • 31
    • 0042529200 scopus 로고    scopus 로고
    • Use of 16S-23S rRNA intergenic spacer region PCR and repetitive extragenic palindromic PCR analyses of Escherichia coli isolates to identify nonpoint fecal sources
    • Seurinck, S., W. Verstraete, and S. D. Siciliano. 2003. Use of 16S-23S rRNA intergenic spacer region PCR and repetitive extragenic palindromic PCR analyses of Escherichia coli isolates to identify nonpoint fecal sources. Appl. Environ. Microbiol. 69:4942-4950.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 4942-4950
    • Seurinck, S.1    Verstraete, W.2    Siciliano, S.D.3
  • 33
    • 0032766627 scopus 로고    scopus 로고
    • Genetic structure of natural populations of Escherichia coli in wild hosts on different continents
    • Souza, V., M. Rocha, A. Valera, and L. E. Eguiarte. 1999. Genetic structure of natural populations of Escherichia coli in wild hosts on different continents. Appl. Environ. Microbiol. 65:3373-3385.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3373-3385
    • Souza, V.1    Rocha, M.2    Valera, A.3    Eguiarte, L.E.4
  • 34
    • 0043265280 scopus 로고    scopus 로고
    • Survival of indicators of bacterial and viral contamination in wastewater subjected to low temperatures and freezing: Application to cold climate waste stabilization ponds
    • Torrella, F., J. P. Lopez, and C. J. Banks. 2003. Survival of indicators of bacterial and viral contamination in wastewater subjected to low temperatures and freezing: application to cold climate waste stabilization ponds. Water Sci. Technol. 48:105-112.
    • (2003) Water Sci. Technol. , vol.48 , pp. 105-112
    • Torrella, F.1    Lopez, J.P.2    Banks, C.J.3
  • 35
    • 0003688691 scopus 로고
    • EPA-440/5-84/002. Office of Water Regulation and Standards, Criteria and Standards Division, Washington, D.C.
    • U.S. Environmental Protection Agency. 1986. Ambient water quality criteria for bacteria-1986. EPA-440/5-84/002. Office of Water Regulation and Standards, Criteria and Standards Division, Washington, D.C.
    • (1986) Ambient Water Quality Criteria for Bacteria - 1986
  • 36
    • 0003842931 scopus 로고    scopus 로고
    • EPA841-S-97-001. Office of Water, Washington, D.C.
    • U.S. Environmental Protection Agency. 1998. The quality of our nation's waters: 1996. EPA841-S-97-001. Office of Water, Washington, D.C.
    • (1998) The Quality of Our Nation's Waters: 1996
  • 39
    • 0026323259 scopus 로고
    • Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes
    • Versalvoic, J., T. Koeuth, and J. R. Lupski. 1991. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res. 19:6823-6831.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 6823-6831
    • Versalvoic, J.1    Koeuth, T.2    Lupski, J.R.3
  • 40
    • 0001335590 scopus 로고
    • Genetic population structure and pathogenicity in enteric bacteria
    • S. Baumberg, J. P. W. Young, E. M. H. Wellington, and J. R. Saunders (ed.). Cambridge University Press, Cambridge, United Kingdom
    • Whittam, T. M. 1995. Genetic population structure and pathogenicity in enteric bacteria, p. 217-245. In S. Baumberg, J. P. W. Young, E. M. H. Wellington, and J. R. Saunders (ed.), Population genetics of bacteria (Symposium 52). Cambridge University Press, Cambridge, United Kingdom.
    • (1995) Population Genetics of Bacteria (Symposium 52) , pp. 217-245
    • Whittam, T.M.1


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