메뉴 건너뛰기




Volumn 295, Issue , 2012, Pages 86-99

Within-host demographic fluctuations and correlations in early retroviral infection

Author keywords

HIV; Monte Carlo simulation; Population dynamics

Indexed keywords

CORRELATION; DEMOGRAPHIC TREND; HUMAN IMMUNODEFICIENCY VIRUS; INFECTIOUS DISEASE; MONTE CARLO ANALYSIS; POPULATION DYNAMICS; STOCHASTICITY; VIRAL DISEASE;

EID: 82655179816     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2011.11.016     Document Type: Article
Times cited : (7)

References (51)
  • 1
    • 67049167214 scopus 로고    scopus 로고
    • Quantifying the development of the peripheral naive CD4+ T-cell pool in humans
    • Bains I., Antia R., Callard R., Yates A.J. Quantifying the development of the peripheral naive CD4+ T-cell pool in humans. Blood 2009, 113:5480-5487.
    • (2009) Blood , vol.113 , pp. 5480-5487
    • Bains, I.1    Antia, R.2    Callard, R.3    Yates, A.J.4
  • 2
    • 7644242473 scopus 로고    scopus 로고
    • A simple cellular automaton model for influenza A viral infections
    • Beauchemin C., Samuel J., Tuszynski J. A simple cellular automaton model for influenza A viral infections. J. Theor. Biol. 2005, 232:223-234.
    • (2005) J. Theor. Biol. , vol.232 , pp. 223-234
    • Beauchemin, C.1    Samuel, J.2    Tuszynski, J.3
  • 3
    • 0034009126 scopus 로고    scopus 로고
    • HIV-infected human Langerhans cells transmit infection to human lymphoid tissue ex vivo
    • Blauvelt A., Glushakova S., Margolis L.B. HIV-infected human Langerhans cells transmit infection to human lymphoid tissue ex vivo. AIDS 2000, 14:647-651.
    • (2000) AIDS , vol.14 , pp. 647-651
    • Blauvelt, A.1    Glushakova, S.2    Margolis, L.B.3
  • 6
    • 33947225091 scopus 로고    scopus 로고
    • Quantification of T-cell dynamics: from telomeres to DNA labeling
    • Borghans J.A.M., de Boer R.J. Quantification of T-cell dynamics: from telomeres to DNA labeling. Immunol. Rev. 2007, 216:35-47.
    • (2007) Immunol. Rev. , vol.216 , pp. 35-47
    • Borghans, J.A.M.1    de Boer, R.J.2
  • 7
    • 23944491675 scopus 로고    scopus 로고
    • Avoiding negative populations in explicit Poisson tau-leaping
    • Cao Y., Gillespie D.T., Petzold L.R. Avoiding negative populations in explicit Poisson tau-leaping. J. Chem. Phys. 2005, 123:054104.
    • (2005) J. Chem. Phys. , vol.123 , pp. 054104
    • Cao, Y.1    Gillespie, D.T.2    Petzold, L.R.3
  • 8
    • 11244257420 scopus 로고    scopus 로고
    • Mutation, fitness, viral diversity, and predictive markers of disease progression in a computational model of HIV type 1 infection
    • Castiglione F., Poccia F., D'Offizi G., Bernaschi M. Mutation, fitness, viral diversity, and predictive markers of disease progression in a computational model of HIV type 1 infection. AIDS Res. Hum. Retroviruses 2004, 20:1314-1323.
    • (2004) AIDS Res. Hum. Retroviruses , vol.20 , pp. 1314-1323
    • Castiglione, F.1    Poccia, F.2    D'Offizi, G.3    Bernaschi, M.4
  • 11
    • 79955550951 scopus 로고    scopus 로고
    • A stochastic model of latently infected cell reactivation and viral blip generation in treated HIV patients
    • Conway J.M., Coombs D. A stochastic model of latently infected cell reactivation and viral blip generation in treated HIV patients. PLoS Comput. Biol. 2011, 7:e1002033.
    • (2011) PLoS Comput. Biol. , vol.7
    • Conway, J.M.1    Coombs, D.2
  • 14
    • 36849064140 scopus 로고    scopus 로고
    • Variation in HIV-1 set-point viral load: epidemiological analysis and an evolutionary hypothesis
    • Fraser C., Hollingsworth T.D., Chapman R., de Wolf F., Hanage W.P. Variation in HIV-1 set-point viral load: epidemiological analysis and an evolutionary hypothesis. Proc. Natl. Acad. Sci. USA 2007, 104:17441-17446.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 17441-17446
    • Fraser, C.1    Hollingsworth, T.D.2    Chapman, R.3    de Wolf, F.4    Hanage, W.P.5
  • 17
    • 0017030517 scopus 로고
    • A general method for numerically simulating the stochastic time evolution of coupled chemical reactions
    • Gillespie D.T. A general method for numerically simulating the stochastic time evolution of coupled chemical reactions. J. Comput. Phys. 1976, 22:403.
    • (1976) J. Comput. Phys. , vol.22 , pp. 403
    • Gillespie, D.T.1
  • 18
    • 33645429016 scopus 로고
    • Stochastic simulation of coupled chemical reactions
    • Gillespie D.T. Stochastic simulation of coupled chemical reactions. J. Phys. Chem. 1977, 81:2340.
    • (1977) J. Phys. Chem. , vol.81 , pp. 2340
    • Gillespie, D.T.1
  • 19
    • 0035933994 scopus 로고    scopus 로고
    • Approximate accelerated stochastic simulation of chemically reacting systems
    • Gillespie D.T. Approximate accelerated stochastic simulation of chemically reacting systems. J. Chem. Phys. 2001, 115:1716.
    • (2001) J. Chem. Phys. , vol.115 , pp. 1716
    • Gillespie, D.T.1
  • 20
    • 34249950625 scopus 로고    scopus 로고
    • Stochastic simulation of chemical kinetics
    • Gillespie D.T. Stochastic simulation of chemical kinetics. Annu. Rev. Phys. Chem. 2007, 58:35.
    • (2007) Annu. Rev. Phys. Chem. , vol.58 , pp. 35
    • Gillespie, D.T.1
  • 23
    • 21744447344 scopus 로고    scopus 로고
    • Monte Carlo estimates of natural variation in HIV infections
    • Heffernan J.M., Wahl L.M. Monte Carlo estimates of natural variation in HIV infections. J. Theor. Biol. 2005, 236:137.
    • (2005) J. Theor. Biol. , vol.236 , pp. 137
    • Heffernan, J.M.1    Wahl, L.M.2
  • 25
    • 0035052008 scopus 로고    scopus 로고
    • A stochastic modeling of early HIV-1 population dynamics
    • Kamina A., Makuch R.W., Zhao H. A stochastic modeling of early HIV-1 population dynamics. Math. Biosci. 2001, 170:187-198.
    • (2001) Math. Biosci. , vol.170 , pp. 187-198
    • Kamina, A.1    Makuch, R.W.2    Zhao, H.3
  • 27
    • 38149104583 scopus 로고    scopus 로고
    • Sensitivity analysis of HIV infection response to treatment via stochastic modeling
    • Khalili S., Armaou A. Sensitivity analysis of HIV infection response to treatment via stochastic modeling. Chem. Eng. Sci. 2008, 63:1330.
    • (2008) Chem. Eng. Sci. , vol.63 , pp. 1330
    • Khalili, S.1    Armaou, A.2
  • 29
    • 0038702043 scopus 로고    scopus 로고
    • Markov modelling of changes in HIV-specific cytotoxic T-lymphocyte responses with time in untreated HIV-1 infected patients
    • IMMUNOCO Study Group
    • Kousignian I., Autran B., Chouquet C., Calvez V., Gomard E., Katlama C., Rivire Y., Costagliola D. Markov modelling of changes in HIV-specific cytotoxic T-lymphocyte responses with time in untreated HIV-1 infected patients. Stat. Med. 2003, 22:1675. IMMUNOCO Study Group.
    • (2003) Stat. Med. , vol.22 , pp. 1675
    • Kousignian, I.1    Autran, B.2    Chouquet, C.3    Calvez, V.4    Gomard, E.5    Katlama, C.6    Rivire, Y.7    Costagliola, D.8
  • 30
    • 58149193195 scopus 로고    scopus 로고
    • Within-host virus models with periodic antiviral therapy
    • Leenheer P.D. Within-host virus models with periodic antiviral therapy. Bull. Math. Biol. 2009, 71:189-210.
    • (2009) Bull. Math. Biol. , vol.71 , pp. 189-210
    • Leenheer, P.D.1
  • 33
    • 77952407044 scopus 로고    scopus 로고
    • A stochastic spatial model of HIV dynamics with an asymmetric battle between the virus and the immune system
    • Lin H., Shuai J.W. A stochastic spatial model of HIV dynamics with an asymmetric battle between the virus and the immune system. New J. Phys. 2010, 12:043051.
    • (2010) New J. Phys. , vol.12 , pp. 043051
    • Lin, H.1    Shuai, J.W.2
  • 34
    • 0037385686 scopus 로고    scopus 로고
    • A novel antiviral intervention results in more accurate assessment of human immunodeficiency virus type 1 replication dynamics and T-cell decay in vivo
    • Markowitz M., Louie M., Hurley A., Sun E., Mascio M.D., Perelson A.S., Ho D.D. A novel antiviral intervention results in more accurate assessment of human immunodeficiency virus type 1 replication dynamics and T-cell decay in vivo. J. Virol. 2003, 77:5037-5038.
    • (2003) J. Virol. , vol.77 , pp. 5037-5038
    • Markowitz, M.1    Louie, M.2    Hurley, A.3    Sun, E.4    Mascio, M.D.5    Perelson, A.S.6    Ho, D.D.7
  • 35
    • 0003056310 scopus 로고
    • Modeling the interaction of HIV with cells of the immune system
    • Springer, Berlin, C. Castillo-Chavez (Ed.)
    • Merrill S.J. Modeling the interaction of HIV with cells of the immune system. Mathematical and Statistical Approaches to AIDS Epidemiology 1989, 371. Springer, Berlin. C. Castillo-Chavez (Ed.).
    • (1989) Mathematical and Statistical Approaches to AIDS Epidemiology , pp. 371
    • Merrill, S.J.1
  • 36
    • 23344437451 scopus 로고    scopus 로고
    • The stochastic dance of early HIV infection
    • Merrill S.J. The stochastic dance of early HIV infection. J. Comput. Appl. Math. 2005, 184:242.
    • (2005) J. Comput. Appl. Math. , vol.184 , pp. 242
    • Merrill, S.J.1
  • 37
    • 0035120581 scopus 로고    scopus 로고
    • Release of virus from lymphoid tissue affects human immunodeficiency virus type 1 and hepatitis C virus kinetics in the blood
    • Müller V., Marée A.F., Boer R.J.D. Release of virus from lymphoid tissue affects human immunodeficiency virus type 1 and hepatitis C virus kinetics in the blood. J. Virol. 2001, 75:2597.
    • (2001) J. Virol. , vol.75 , pp. 2597
    • Müller, V.1    Marée, A.F.2    Boer, R.J.D.3
  • 38
    • 0029985351 scopus 로고    scopus 로고
    • Population dynamics of immune responses to persistent viruses
    • Nowak M.A., Bangham C.R. Population dynamics of immune responses to persistent viruses. Science 1996, 272:74-79.
    • (1996) Science , vol.272 , pp. 74-79
    • Nowak, M.A.1    Bangham, C.R.2
  • 40
    • 0036371443 scopus 로고    scopus 로고
    • Modelling viral and immune system dynamics
    • Perelson A.S. Modelling viral and immune system dynamics. Nat. Rev. Immunol. 2002, 2:28.
    • (2002) Nat. Rev. Immunol. , vol.2 , pp. 28
    • Perelson, A.S.1
  • 44
    • 0036680069 scopus 로고    scopus 로고
    • Viral load and stochastic mutation in a Monte Carlo simulation of HIV
    • Ruskin H.J., Pandey R.B., Liu Y. Viral load and stochastic mutation in a Monte Carlo simulation of HIV. Physica A 2002, 311:213.
    • (2002) Physica A , vol.311 , pp. 213
    • Ruskin, H.J.1    Pandey, R.B.2    Liu, Y.3
  • 46
    • 0032518729 scopus 로고    scopus 로고
    • Stochastic modeling of the dynamics of CD4+ T-cell infection by HIV and some Monte Carlo studies
    • Tan W.Y., Wu H. Stochastic modeling of the dynamics of CD4+ T-cell infection by HIV and some Monte Carlo studies. Math. Biosci. 1998, 147:173.
    • (1998) Math. Biosci. , vol.147 , pp. 173
    • Tan, W.Y.1    Wu, H.2
  • 47
    • 0032556667 scopus 로고    scopus 로고
    • A stochastic model for early HIV-1 population dynamics
    • Tuckwell H.C., le Corfec E. A stochastic model for early HIV-1 population dynamics. J. Theor. Biol. 1998, 195:451.
    • (1998) J. Theor. Biol. , vol.195 , pp. 451
    • Tuckwell, H.C.1    le Corfec, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.