-
1
-
-
0000243550
-
Early detection of neighbour plants by phytochrome perception of spectral changes in reflected sunlight
-
Ballaré, C.L., Sánchez, R.A., Scopel, A.L., Casal, J.J., and, Ghersa, C.M., (1987) Early detection of neighbour plants by phytochrome perception of spectral changes in reflected sunlight. Plant Cell Environ. 10, 551-557.
-
(1987)
Plant Cell Environ
, vol.10
, pp. 551-557
-
-
Ballaré, C.L.1
Sánchez, R.A.2
Scopel, A.L.3
Casal, J.J.4
Ghersa, C.M.5
-
2
-
-
34447525658
-
The signaling state of Arabidopsis cryptochrome 2 contains flavin semiquinone
-
DOI 10.1074/jbc.M700616200
-
Banerjee, R., Schleicher, E., Meier, S., Viana, R.M., Pokorny, R., Ahmad, M., Bittl, R., and, Batschauer, A., (2007) The signaling state of Arabidopsis cryptochrome 2 contains flavin semiquinone. J. Biol. Chem. 282, 14916-14922. (Pubitemid 47093371)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.20
, pp. 14916-14922
-
-
Banerjee, R.1
Schleicher, E.2
Meier, S.3
Viana, R.M.4
Pokorny, R.5
Ahmad, M.6
Bittl, R.7
Batschauer, A.8
-
3
-
-
34248152117
-
Cryptochrome blue light photoreceptors are activated through interconversion of flavin redox states
-
DOI 10.1074/jbc.M609842200
-
Bouly, J.-P., Schleicher, E., Dionisio-Sese, M., et al. (2007) Cryptochrome blue light photoreceptors are activated through interconversion of flavin redox states. J. Biol. Chem. 282, 9383-9391. (Pubitemid 47104615)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.13
, pp. 9383-9391
-
-
Bouly, J.-P.1
Schleicher, E.2
Dionisio-Sese, M.3
Vandenbussche, F.4
Van Der Straeten, D.5
Bakrim, N.6
Meier, S.7
Batschauer, A.8
Galland, P.9
Bittl, R.10
Ahmad, M.11
-
4
-
-
0000359575
-
The function, action and adaptive significance of phytochrome in light-grown plants
-
Casal, J.J., and, Smith, H., (1989)) The function, action and adaptive significance of phytochrome in light-grown plants. Plant Cell Environ. 12, 855-862.
-
(1989)
Plant Cell Environ
, vol.12
, pp. 855-862
-
-
Casal, J.J.1
Smith, H.2
-
5
-
-
33644871376
-
Microarray analysis of the transcriptome as a stepping stone towards understanding biological systems: Practical considerations and perspectives
-
DOI 10.1111/j.1365-313X.2006.02668.x
-
Clarke, J.D., and, Zhu, T., (2006) Microarray analysis of the transcriptome as a stepping stone towards understanding biological systems: practical considerations and perspectives. Plant J. 45, 630-650. (Pubitemid 43373713)
-
(2006)
Plant Journal
, vol.45
, Issue.4
, pp. 630-650
-
-
Clarke, J.D.1
Zhu, T.2
-
6
-
-
1942539165
-
The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways
-
DOI 10.1111/j.1365-313X.2004.02052.x
-
Cluis, C.P., Mouchel, C.F., and, Hardtke, C.S., (2004) The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways. Plant J. 38, 332-347. (Pubitemid 38503733)
-
(2004)
Plant Journal
, vol.38
, Issue.2
, pp. 332-347
-
-
Cluis, C.P.1
Mouchel, C.F.2
Hardtke, C.S.3
-
7
-
-
79953009784
-
Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis
-
Cole, B., Kay, S.A., and, Chory, J., (2011) Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis. Plant J. 65, 991-1000.
-
(2011)
Plant J.
, vol.65
, pp. 991-1000
-
-
Cole, B.1
Kay, S.A.2
Chory, J.3
-
8
-
-
32644481938
-
Genome-wide identification and testing of superior reference genes for transcript normalization in arabidopsis
-
DOI 10.1104/pp.105.063743
-
Czechowski, T., Stitt, M., Altmann, T., Udvardi, M.K., and, Scheible, W.R., (2005) Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol. 139, 5-17. (Pubitemid 43951587)
-
(2005)
Plant Physiology
, vol.139
, Issue.1
, pp. 5-17
-
-
Czechowski, T.1
Stitt, M.2
Altmann, T.3
Udvardi, M.K.4
Scheible, W.-R.5
-
9
-
-
38549167870
-
A molecular framework for light and gibberellin control of cell elongation
-
DOI 10.1038/nature06520, PII NATURE06520
-
De Lucas, M., Daviere, J.M., Rodríguez-Falcõn, M., Pontin, M., Iglesias-Pedraz, J.M., Lorrain, S., Fankhauser, C., Blázquez, M.A., Titarenko, E., and, Prat, S., (2008) A molecular framework for light and gibberellin control of cell elongation. Nature, 451, 480-484. (Pubitemid 351158891)
-
(2008)
Nature
, vol.451
, Issue.7177
, pp. 480-484
-
-
De Lucas, M.1
Daviere, J.-M.2
Rodriguez-Falcon, M.3
Pontin, M.4
Iglesias-Pedraz, J.M.5
Lorrain, S.6
Fankhauser, C.7
Blazquez, M.A.8
Titarenko, E.9
Prat, S.10
-
10
-
-
0022214532
-
Tillering responses to enrichment of red light beneath the canopy in a humid natural grassland.
-
Deregibus, V.A., Snchez, R.A., Casal, J.J., and, Trlica, M.J., (1985) Tillering responses to enrichment of red light beneath the canopy in a humid natural grassland. J. Appl. Ecol. 22, 199-206. (Pubitemid 16277602)
-
(1985)
Journal of Applied Ecology
, vol.22
, Issue.1
, pp. 199-206
-
-
Deregibus, V.A.1
Sanchez, R.A.2
Casal, J.J.3
Trlica, M.J.4
-
11
-
-
0347052756
-
A Genomic Analysis of the Shade Avoidance Response in Arabidopsis
-
DOI 10.1104/pp.103.034397
-
Devlin, P.F., Yanovsky, M.J., and, Kay, S.A., (2003) A genomic analysis of the shade avoidance response in Arabidopsis. Plant Physiol. 133, 1617-1629. (Pubitemid 38047293)
-
(2003)
Plant Physiology
, vol.133
, Issue.4
, pp. 1617-1629
-
-
Devlin, P.F.1
Yanovsky, M.J.2
Kay, S.A.3
-
12
-
-
34250902902
-
DELLA protein function in growth responses to canopy signals
-
DOI 10.1111/j.1365-313X.2007.03122.x
-
Djakovic-Petrovic, T., Wit, M.D., Voesenek, L.A.C.J., and, Pierik, R., (2007) DELLA protein function in growth responses to canopy signals. Plant J. 51, 117-126. (Pubitemid 46985553)
-
(2007)
Plant Journal
, vol.51
, Issue.1
, pp. 117-126
-
-
Djakovic-Petrovic, T.1
Wit, M.D.2
Voesenek, L.A.C.J.3
Pierik, R.4
-
13
-
-
0002585895
-
Photoreversible control of elongation of pinto beans and other plants under normal conditions of growth
-
Downs, R.J., Hendricks, S.B., and, Borthwick, H.A., (1957) Photoreversible control of elongation of pinto beans and other plants under normal conditions of growth. Bot. Gaz. 118, 199-208.
-
(1957)
Bot. Gaz.
, vol.118
, pp. 199-208
-
-
Downs, R.J.1
Hendricks, S.B.2
Borthwick, H.A.3
-
14
-
-
0033829443
-
RSF1, an Arabidopsis locus implicated in phytochrome a signaling
-
Fankhauser, C., and, Chory, J., (2000) RSF1, an Arabidopsis locus implicated in phytochrome a signaling. Plant Physiol. 124, 39-45.
-
(2000)
Plant Physiol.
, vol.124
, pp. 39-45
-
-
Fankhauser, C.1
Chory, J.2
-
15
-
-
11844289579
-
Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis circadian clock
-
DOI 10.1016/j.cub.2004.12.067, PII S0960982204010243
-
Farre, E., Harmer, S.L., Harmon, F.G., Yanovsky, M.J., and, Kay, S.A., (2005) Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis circadian clock. Curr. Biol. 15, 47-54. (Pubitemid 40084701)
-
(2005)
Current Biology
, vol.15
, Issue.1
, pp. 47-54
-
-
Farre, E.M.1
Harmer, S.L.2
Harmon, F.G.3
Yanovsky, M.J.4
Kay, S.A.5
-
16
-
-
38549142539
-
Coordinated regulation of Arabidopsis thaliana development by light and gibberellins
-
DOI 10.1038/nature06448, PII NATURE06448
-
Feng, S., Martinez, C., Gusmaroli, G., et al. (2008) Coordinated regulation of Arabidopsis thaliana development by light and gibberellins. Nature, 451, 475-479. (Pubitemid 351158880)
-
(2008)
Nature
, vol.451
, Issue.7177
, pp. 475-479
-
-
Feng, S.1
Martinez, C.2
Gusmaroli, G.3
Wang, Y.4
Zhou, J.5
Wang, F.6
Chen, L.7
Yu, L.8
Iglesias-Pedraz, J.M.9
Kircher, S.10
Schafer, E.11
Fu, X.12
Fan, L.-M.13
Deng, X.W.14
-
17
-
-
0033198884
-
GIGANTEA: A circadian clock-controlled gene that regulates photoperiodic flowering in Arabidopsis and encodes a protein with several possible membrane-spanning domains
-
DOI 10.1093/emboj/18.17.4679
-
Fowler, S., Lee, K., Onouchi, H., Samach, A., Richardson, K., Morris, B., Coupland, G., and, Putterill, J., (1999) GIGANTEA: A circadian clock-controlled gene that regulates photoperiodic flowering in Arabidopsis and encodes a protein with several possible membrane-spanning domains. EMBO J. 18, 4679-4688. (Pubitemid 29415522)
-
(1999)
EMBO Journal
, vol.18
, Issue.17
, pp. 4679-4688
-
-
Fowler, S.1
Lee, K.2
Onouchi, H.3
Samach, A.4
Richardson, K.5
Morris, B.6
Coupland, G.7
Putterill, J.8
-
18
-
-
49249111989
-
Shade avoidance
-
Franklin, K.A., (2008) Shade avoidance. New Phytol. 179, 930-944.
-
(2008)
New Phytol.
, vol.179
, pp. 930-944
-
-
Franklin, K.A.1
-
19
-
-
33947646373
-
Phytochrome A is an irradiance-dependent red light sensor
-
DOI 10.1111/j.1365-313X.2007.03036.x
-
Franklin, K.A., Allen, T., and, Whitelam, G.C., (2007) Phytochrome A is an irradiance-dependent red light sensor. Plant J. 50, 108-117. (Pubitemid 46493399)
-
(2007)
Plant Journal
, vol.50
, Issue.1
, pp. 108-117
-
-
Franklin, K.A.1
Allen, T.2
Whitelam, G.C.3
-
20
-
-
0033180001
-
The Arabidopsis blue-light receptor cryptochrome 2 is a nuclear protein regulated by a blue-light dependent post-transcriptional mechanism
-
Guo, H., Duong, H., Ma, N., and, Lin, C., (1999) The Arabidopsis blue-light receptor cryptochrome 2 is a nuclear protein regulated by a blue-light dependent post-transcriptional mechanism. Plant J. 19, 279-289.
-
(1999)
Plant J.
, vol.19
, pp. 279-289
-
-
Guo, H.1
Duong, H.2
Ma, N.3
Lin, C.4
-
21
-
-
10744221727
-
The Time for Coffee Gene Maintains the Amplitude and Timing of Arabidopsis Circadian Clocks
-
DOI 10.1105/tpc.013730
-
Hall, A., Bastow, R.M., Davis, S.J., et al. (2003) The time for coffee gene maintains the amplitude and timing of Arabidopsis circadian clocks. Plant Cell, 15, 2719-2729. (Pubitemid 37470671)
-
(2003)
Plant Cell
, vol.15
, Issue.11
, pp. 2719-2729
-
-
Hall, A.1
Bastow, R.M.2
Davis, S.J.3
Hanano, S.4
McWatters, H.G.5
Hibberd, V.6
Doyle, M.R.7
Sung, S.8
Halliday, K.J.9
Amasino, R.M.10
Millar, A.J.11
-
22
-
-
22544468054
-
LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms
-
DOI 10.1073/pnas.0503029102
-
Hazen, S.P., Schultz, T.F., Pruneda-Paz, J.L., Borevitz, J.O., Ecker, J.R., and, Kay, S.A., (2005) LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms. Proc. Nat. Acad. Sci. USA, 102, 10387-10392. (Pubitemid 41023380)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.29
, pp. 10387-10392
-
-
Hazen, S.P.1
Schultz, T.F.2
Pruneda-Paz, J.L.3
Borevitz, J.O.4
Ecker, J.R.5
Kay, S.A.6
-
23
-
-
0037093378
-
Two interacting bZIP proteins are direct targets of COP1-mediated control of light-dependent gene expression in Arabidopsis
-
DOI 10.1101/gad.969702
-
Holm, M., Li-Geng, M., Li-Jia, Q., and, Deng, X.W., (2002) Two interacting bZIP proteins are direct targets of COP1-mediated control of light-dependent gene expression in Arabidopsis. Genes Dev. 16, 1247-1259. (Pubitemid 34553105)
-
(2002)
Genes and Development
, vol.16
, Issue.10
, pp. 1247-1259
-
-
Holm, M.1
Ma, L.-G.2
Qu, L.-J.3
Deng, X.-W.4
-
24
-
-
84981605182
-
The function of phytochrome in the natural environment. II. The influence of vegetation canopies on the spectral energy distribution of natural daylight
-
Holmes, M.G., and, Smith, H., (1977) The function of phytochrome in the natural environment. II. The influence of vegetation canopies on the spectral energy distribution of natural daylight. Photochem. Photobiol. 25, 539-545.
-
(1977)
Photochem. Photobiol
, vol.25
, pp. 539-545
-
-
Holmes, M.G.1
Smith, H.2
-
25
-
-
0037093501
-
PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis
-
DOI 10.1093/emboj/21.10.2441
-
Huq, E., and, Quail, P., (2002) PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis. EMBO J. 21, 2441-2450. (Pubitemid 34546716)
-
(2002)
EMBO Journal
, vol.21
, Issue.10
, pp. 2441-2450
-
-
Huq, E.1
Quail, P.H.2
-
26
-
-
77955496973
-
Light-regulated plant growth and development
-
Kami, C., Lorrain, S., Hornitschek, P., and, Fankhauser, C., (2010) Light-regulated plant growth and development. Curr. Top. Dev. Biol. 91, 29-66.
-
(2010)
Curr. Top. Dev. Biol.
, vol.91
, pp. 29-66
-
-
Kami, C.1
Lorrain, S.2
Hornitschek, P.3
Fankhauser, C.4
-
27
-
-
78651258678
-
Auxin transport through PIN-FORMED 3 (PIN3) controls shade avoidance and fitness during competition
-
Keuskampa, D.H., Pollmannb, S., Voeseneka, L.A.C.J., Peetersa, A.J.M., and, Ronald Pierika, R., (2010) Auxin transport through PIN-FORMED 3 (PIN3) controls shade avoidance and fitness during competition. Proc. Nat. Acad. Sci. USA, 107, 22740-22744.
-
(2010)
Proc. Nat. Acad. Sci. USA
, vol.107
, pp. 22740-22744
-
-
Keuskampa, D.H.1
Pollmannb, S.2
Voeseneka, L.A.C.J.3
Peetersa, A.J.M.4
Ronald Pierika, R.5
-
28
-
-
0346422328
-
Early Flowering 4 Functions in Phytochrome B-Regulated Seedling De-Etiolation
-
DOI 10.1104/pp.103.030007
-
Khanna, R., Kikis, E., and, Quail, P., (2003) EARLY FLOWERING 4 functions in phytochrome B-regulated seedling de-etiolation. Plant Physiol. 133, 1530-1538. (Pubitemid 38047285)
-
(2003)
Plant Physiology
, vol.133
, Issue.4
, pp. 1530-1538
-
-
Khanna, R.1
Kikis, E.A.2
Quail, P.H.3
-
29
-
-
13744261351
-
A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors
-
DOI 10.1105/tpc.104.025643
-
Khanna, R., Huq, E., Kikis, E.A., Al-Sady, B., Lanzatella, C., and, Quail, P.H., (2004) A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors. Plant Cell, 16, 3033-3044. (Pubitemid 41075750)
-
(2004)
Plant Cell
, vol.16
, Issue.11
, pp. 3033-3044
-
-
Khanna, R.1
Huq, E.2
Kikis, E.A.3
Al-Sady, B.4
Lanzatella, C.5
Quail, P.H.6
-
30
-
-
33644814040
-
ELF4 is a phytochrome-regulated component of a negative-feedback loop involving the central oscillator components CCA1 and LHY
-
Kikis, E.A., Khanna, R., and, Quail, P.H., (2005) ELF4 is a phytochrome-regulated component of a negative-feedback loop involving the central oscillator components CCA1 and LHY. Plant J. 44, 300-313.
-
(2005)
Plant J.
, vol.44
, pp. 300-313
-
-
Kikis, E.A.1
Khanna, R.2
Quail, P.H.3
-
31
-
-
0037450767
-
Light-regulated translation mediates gated induction of the Arabidopsis clock protein LHY
-
DOI 10.1093/emboj/cdg075
-
Kim, J.Y., Song, H.R., Taylor, B.L., and, Carre, I.A., (2003) Light-regulated translation mediates gated induction of the Arabidopsis clock protein LHY. EMBO J. 22, 935-944. (Pubitemid 36227795)
-
(2003)
EMBO Journal
, vol.22
, Issue.4
, pp. 935-944
-
-
Kim, J.-Y.1
Song, H.-R.2
Taylor, B.L.3
Carre, I.A.4
-
32
-
-
77955676298
-
Involvement of auxin and brassinosteroid in the regulation of petiole elongation under the shade
-
Kozuka, T., Kobayashi, J., Horiguchi, G., Demura, T., Sakakibara, H., Tsukaya, H., and, Nagatani, A., (2010) Involvement of auxin and brassinosteroid in the regulation of petiole elongation under the shade. Plant Physiol. 153, 1608-1618.
-
(2010)
Plant Physiol.
, vol.153
, pp. 1608-1618
-
-
Kozuka, T.1
Kobayashi, J.2
Horiguchi, G.3
Demura, T.4
Sakakibara, H.5
Tsukaya, H.6
Nagatani, A.7
-
33
-
-
33745606445
-
Phytochrome kinase substrate 1 is a phototropin 1 binding protein required for phototropism
-
DOI 10.1073/pnas.0603799103
-
Lariguet, P., Schepens, I., Hodgson, D., et al. (2006) Phytochrome kinase substrate 1 is a phototropin 1 binding protein required for phototropism. Proc. Nat. Acad. Sci. USA, 103, 10134-10139. (Pubitemid 43993635)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.26
, pp. 10134-10139
-
-
Lariguet, P.1
Schepens, I.2
Hodgson, D.3
Pedmale, U.V.4
Trevisan, M.5
Kami, C.6
De Carbonnel, M.7
Alonso, J.M.8
Ecker, J.R.9
Liscum, E.10
Fankhauser, C.11
-
34
-
-
34250780751
-
Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development
-
DOI 10.1105/tpc.106.047688
-
Lee, J., He, K., Stolc, V., Lee, H., Figueroa, P., Gao, Y., Tongprasit, W., Zhao, H., Lee, I., and, Xing, W.D., (2007) Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. Plant Cell, 19, 731-749. (Pubitemid 46953224)
-
(2007)
Plant Cell
, vol.19
, Issue.3
, pp. 731-749
-
-
Lee, J.1
He, K.2
Stolc, V.3
Lee, H.4
Figueroa, P.5
Gao, Y.6
Tongprasit, W.7
Zhao, H.8
Lee, I.9
Xing, W.D.10
-
35
-
-
0029360727
-
Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR
-
Liu, Y.G., Mitsukawa, N., Oosumi, T., and, Whittier, R.F., (1995) Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J. 8, 457-463.
-
(1995)
Plant J.
, vol.8
, pp. 457-463
-
-
Liu, Y.G.1
Mitsukawa, N.2
Oosumi, T.3
Whittier, R.F.4
-
36
-
-
37749031518
-
Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors
-
Lorrain, S., Allen, T., Duek, P.D., Whitelam, G.C., and, Fankhauser, C., (2008) Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors. Plant J. 53 312-323.
-
(2008)
Plant J.
, vol.53
, pp. 312-323
-
-
Lorrain, S.1
Allen, T.2
Duek, P.D.3
Whitelam, G.C.4
Fankhauser, C.5
-
37
-
-
54749087162
-
A morning-specific phytohormone gene expression program underlying rhythmic plant growth
-
Michael, T.P., Breton, G., Hazen, S.P., Priest, H., Mockler, T.C., Kay, S.A., and, Chory, J., (2008a) A morning-specific phytohormone gene expression program underlying rhythmic plant growth. PLoS Biol. 6, 1887-1898.
-
(2008)
PLoS Biol.
, vol.6
, pp. 1887-1898
-
-
Michael, T.P.1
Breton, G.2
Hazen, S.P.3
Priest, H.4
Mockler, T.C.5
Kay, S.A.6
Chory, J.7
-
38
-
-
40149105297
-
Network discovery pipeline elucidates conserved time-of-day-specific cis-regulatory modules
-
.
-
Michael, T.P., Mockler, T.C., Breton, G., et al. (2008b) Network discovery pipeline elucidates conserved time-of-day-specific cis-regulatory modules. PLoS Genet. 4, 1-17.
-
(2008)
PLoS Genet
, vol.4
, pp. 1-17
-
-
Michael, T.P.1
Mockler, T.C.2
Breton, G.3
-
39
-
-
0033768742
-
Shade avoidance responses. Driving auxin along lateral routes
-
Morelli, G., and, Ruberti, I., (2000) Shade avoidance responses. Driving auxin along lateral routes. Plant Physiol. 122, 621-626.
-
(2000)
Plant Physiol.
, vol.122
, pp. 621-626
-
-
Morelli, G.1
Ruberti, I.2
-
40
-
-
0036730157
-
Light and shade in the photocontrol of Arabidopsis growth
-
DOI 10.1016/S1360-1385(02)02314-2, PII S1360138502023142
-
Morelli, G., and, Ruberti, I., (2002) Light and shade in photocontrol of Arabidopsis growth. Trends Plant Sci. 7, 399-404. (Pubitemid 36726489)
-
(2002)
Trends in Plant Science
, vol.7
, Issue.9
, pp. 399-404
-
-
Morelli, G.1
Ruberti, I.2
-
41
-
-
0032567039
-
PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein
-
Ni, M., Tepperman, J.M., and, Quail, P.H., (1998) PIF3, a phytochrome-interacting factor necessay for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein. Cell, 95, 657-667. (Pubitemid 28544127)
-
(1998)
Cell
, vol.95
, Issue.5
, pp. 657-667
-
-
Ni, M.1
Tepperman, J.M.2
Quail, P.H.3
-
42
-
-
34447520296
-
Rhythmic growth explained by coincidence between internal and external cues
-
DOI 10.1038/nature05946, PII NATURE05946
-
Nozue, K., Covington, M.F., Duek, P.D., Lorrain, S., Fankhauser, C., Harmer, S.L., and, Maloof, J.N., (2007) Rhythmic growth explained by coincidence between internal and external cues. Nature, 448, 358-361. (Pubitemid 47080338)
-
(2007)
Nature
, vol.448
, Issue.7151
, pp. 358-361
-
-
Nozue, K.1
Covington, M.F.2
Duek, P.D.3
Lorrain, S.4
Fankhauser, C.5
Harmer, S.L.6
Maloof, J.N.7
-
43
-
-
28944448612
-
Athena: A resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences
-
DOI 10.1093/bioinformatics/bti714
-
O'Connor, T.R., Dyreson, C., and, Wyrick, J.J., (2005) Athena: a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences. Bioinformatics, 21, 4411-4413. (Pubitemid 41782933)
-
(2005)
Bioinformatics
, vol.21
, Issue.24
, pp. 4411-4413
-
-
O'Connor, T.R.1
Dyreson, C.2
Wyrick, J.J.3
-
44
-
-
0003874851
-
-
London: Chapman and Hall.
-
Packham, J.R., Harding, D.J., Hilton, G.M., and, Stuttard, R.A., (1992) Functional Ecology of Woodlands and Forests. London: Chapman and Hall.
-
(1992)
Functional Ecology of Woodlands and Forests
-
-
Packham, J.R.1
Harding, D.J.2
Hilton, G.M.3
Stuttard, R.A.4
-
45
-
-
0020870263
-
4 tree species in the understory of a Hawaiian forest.
-
Pearcy, R.W., (1983) The light environment and growth of C3 and C4 tree species in the understory of a Hawaiian forest. Oecologia, 58, 19-25. (Pubitemid 15274623)
-
(1983)
Oecologia
, vol.58
, pp. 19-25
-
-
Pearcy, R.W.1
-
46
-
-
65249170815
-
Auxin and ethylene regulate elongation responses to neighbor proximity signals independent of gibberellin and della proteins in Arabidopsis
-
Pierik, R., Djakovic-Petrovic, T., Keuskamp, D.H., De Wit, M., and, Voesenek, L.A.C.J., (2009) Auxin and ethylene regulate elongation responses to neighbor proximity signals independent of gibberellin and DELLA proteins in Arabidopsis. Plant Physiol. 149, 1701-1712.
-
(2009)
Plant Physiol.
, vol.149
, pp. 1701-1712
-
-
Pierik, R.1
Djakovic-Petrovic, T.2
Keuskamp, D.H.3
De Wit, M.4
Voesenek, L.A.C.J.5
-
47
-
-
0027548252
-
Mutations in the gene for the Red/Far-Red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development
-
Reed, J.W., Nagpal, P., Poole, D.S., Furuya, M., and, Chory, J., (1993) Mutations in the gene for the Red/Far-Red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development. Plant Cell, 5, 147-157.
-
(1993)
Plant Cell
, vol.5
, pp. 147-157
-
-
Reed, J.W.1
Nagpal, P.2
Poole, D.S.3
Furuya, M.4
Chory, J.5
-
48
-
-
0027949428
-
Phytochrome A and phytochrome B have overlapping but distinct functions in Arabidopsis development
-
Reed, J.W., Nagatani, A., Elich, T.D., Fagan, M., and, Chory, J., (1994) Phytochrome A and phytochrome B have overlapping but distinct functions in Arabidopsis development. Plant Physiol. 104, 1139-1149.
-
(1994)
Plant Physiol.
, vol.104
, pp. 1139-1149
-
-
Reed, J.W.1
Nagatani, A.2
Elich, T.D.3
Fagan, M.4
Chory, J.5
-
49
-
-
33745436506
-
Identification of primary target genes of phytochrome signaling. Early transcriptional control during shade avoidance responses in arabidopsis
-
DOI 10.1104/pp.105.076331
-
Roig-Villanova, I., Bou, J., Sorin, C., Devlin, P.F., and, Martínez-García, J.F., (2006) Identification of primary target genes of phytochrome signaling. Early transcriptional control during shade avoidance responses in Arabidopsis. Plant Physiol. 141, 85-96. (Pubitemid 43956184)
-
(2006)
Plant Physiology
, vol.141
, Issue.1
, pp. 85-96
-
-
Roig-Villanova, I.1
Bou, J.2
Sorin, C.3
Devlin, P.F.4
Martinez-Garcia, J.F.5
-
50
-
-
36248952192
-
Interaction of shade avoidance and auxin responses: A role for two novel atypical bHLH proteins
-
DOI 10.1038/sj.emboj.7601890, PII 7601890
-
Roig-Villanova, I., Bou-Torrent, J., Galstyan, A., Carretero-Paulet, L., Portolés, S., Rodríguez-Concepciõn, M., and, Martínez-García, J.F., (2007) Interaction of shade avoidance and auxin responses: a role for two novel atypical bHLH proteins. EMBO J. 26, 4756-4767. (Pubitemid 350126795)
-
(2007)
EMBO Journal
, vol.26
, Issue.22
, pp. 4756-4767
-
-
Roig-Villanova, I.1
Bou-Torrent, J.2
Galstyan, A.3
Carretero-Paulet, L.4
Portoles, S.5
Rodriguez-Concepcion, M.6
Martinez-Garcia, J.F.7
-
51
-
-
0032570689
-
Changes in auxin response from mutations in an AUX/IAA gene
-
DOI 10.1126/science.279.5355.1371
-
Rouse, D., Mackay, P., Stirnberg, P., Estelle, M., and, Leyser, O., (1998) Changes in auxin response from mutations in an AUX/IAA gene. Science, 279, 1371-1373. (Pubitemid 28119582)
-
(1998)
Science
, vol.279
, Issue.5355
, pp. 1371-1373
-
-
Rouse, D.1
Mackay, P.2
Stirnberg, P.3
Estelle, M.4
Leyser, O.5
-
52
-
-
0346258011
-
Gating of the rapid shade-avoidance response by the circadian clock in plants
-
DOI 10.1038/nature02174
-
Salter, M.G., Franklin, K.A., and, Whitelam, G.C., (2003) Gating of the rapid shade-avoidance response by the circadian clock in plants. Nature, 426, 680-683. (Pubitemid 38009378)
-
(2003)
Nature
, vol.426
, Issue.6967
, pp. 680-683
-
-
Salter, M.G.1
Franklin, K.A.2
Whitelam, G.C.3
-
53
-
-
0006180620
-
The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering
-
DOI 10.1016/S0092-8674(00)81465-8
-
Schaffer, R., Ramsay, N., Samach, A., Corden, S., Putterill, J., Carré, I.A., and, Coupland, G., (1998) The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering. Cell 93, 1219-1229. (Pubitemid 28307426)
-
(1998)
Cell
, vol.93
, Issue.7
, pp. 1219-1229
-
-
Schaffer, R.1
Ramsay, N.2
Samach, A.3
Corden, S.4
Putterill, J.5
Carre, I.A.6
Coupland, G.7
-
54
-
-
48549105358
-
Phytochrome Kinase Substrate4 modulates phytochrome-mediated control of hypocotyl growth orientation
-
DOI 10.1104/pp.108.118166
-
Schepens, I., Boccalandro, H.E., Kami, C., Casal, J.J., and, Fankhauser, C., (2008) Phytochrome Kinase Substrate4 modulates phytochrome-mediated control of hypocotyl growth orientation. Plant Physiol. 147, 661-671. (Pubitemid 352844313)
-
(2008)
Plant Physiology
, vol.147
, Issue.2
, pp. 661-671
-
-
Schepens, I.1
Boccalandro, H.E.2
Kami, C.3
Casal, J.J.4
Fankhauser, C.5
-
55
-
-
77956706416
-
Cryptochrome as a sensor of the blue/green ratio of natural radiation in Arabidopsis
-
Sellaro, R., Crepy, M., Trupkin, S.A., Karayekov, E., Buchovsky, A.S., Rossi, C., and, Casal, J.J., (2010) Cryptochrome as a sensor of the blue/green ratio of natural radiation in Arabidopsis. Plant Physiol. 154, 401-409.
-
(2010)
Plant Physiol.
, vol.154
, pp. 401-409
-
-
Sellaro, R.1
Crepy, M.2
Trupkin, S.A.3
Karayekov, E.4
Buchovsky, A.S.5
Rossi, C.6
Casal, J.J.7
-
56
-
-
28444433437
-
A dynamic balance between gene activation and repression regulates the shade avoidance response in Arabidopsis
-
DOI 10.1101/gad.364005
-
Sessa, G., Carabelli, M., Sassi, M., Ciolfi, A., Possenti, M., Mittempergher, F., Becker, J., Morelli, G., and, Ruberti, I., (2005) A dynamic balance between gene activation and repression regulates the shade avoidance response in Arabidopsis. Gene Dev. 19, 2811-2815. (Pubitemid 41739966)
-
(2005)
Genes and Development
, vol.19
, Issue.23
, pp. 2811-2815
-
-
Sessa, G.1
Carabelli, M.2
Sassi, M.3
Ciolfi, A.4
Possenti, M.5
Mittempergher, F.6
Becker, J.7
Morelli, G.8
Ruberti, I.9
-
57
-
-
33847345588
-
PIF3 regulates anthocyanin biosynthesis in an HY5-dependent manner with both factors directly binding anthocyanin biosynthetic gene promoters in Arabidopsis
-
DOI 10.1111/j.1365-313X.2006.03021.x
-
Shin, J., Park, E., and, Choi, G., (2007) PIF3 regulates anthocyanin biosynthesis in an HY5-dependent manner with both factors directly binding anthocyanin biosynthetic gene promoters in Arabidopsis. Plant J. 49, 981-994. (Pubitemid 46340691)
-
(2007)
Plant Journal
, vol.49
, Issue.6
, pp. 981-994
-
-
Shin, J.1
Park, E.2
Choi, G.3
-
58
-
-
33751374289
-
Opposite root growth phenotypes of hy5 versus hy5 hyh mutants correlate with increased constitutive auxin signaling
-
DOI 10.1371/journal.pgen.0020202
-
Sibout, R., Sukumar, P., Hettiarachchi, C., Holm, M., Muday, G.K., and, Hardtke, C.S., (2006) Opposite root growth phenotypes of hy5 versus hy5 hyh mutants correlate with increased constitutive auxin signaling. PLoS Genet. 2, 1898-1911. (Pubitemid 44813585)
-
(2006)
PLoS Genetics
, vol.2
, Issue.11
, pp. 1898-1911
-
-
Sibout, R.1
Sukumar, P.2
Hettiarachchi, C.3
Holm, M.4
Muday, G.K.5
Hardtke, C.S.6
-
59
-
-
0001390901
-
Light quality, photoperception and plant strategy
-
Smith, H., (1982) Light quality, photoperception and plant strategy. Annu. Rev. Plant Physiol. 33, 481-518.
-
(1982)
Annu. Rev. Plant Physiol.
, vol.33
, pp. 481-518
-
-
Smith, H.1
-
60
-
-
0034609795
-
Phytochromes and light signal perception by plants-an emerging synthesis
-
Smith, H., (2000) Phytochromes and light signal perception by plants-an emerging synthesis. Nature, 407, 585-590.
-
(2000)
Nature
, vol.407
, pp. 585-590
-
-
Smith, H.1
-
61
-
-
0042424602
-
Statistical significance of genomewide studies
-
Storey, J.D., and, Tibshirani, R., (2003) Statistical significance of genomewide studies. Proc. Nat. Acad. Sci. USA, 100, 9440-9445.
-
(2003)
Proc. Nat. Acad. Sci. USA
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
62
-
-
41149134058
-
Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants
-
DOI 10.1016/j.cell.2008.01.049, PII S0092867408002146
-
Tao, Y., Ferrer, J.L., Ljung, K., et al. (2008) Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants. Cell, 133, 164-176. (Pubitemid 351442992)
-
(2008)
Cell
, vol.133
, Issue.1
, pp. 164-176
-
-
Tao, Y.1
Ferrer, J.-L.2
Ljung, K.3
Pojer, F.4
Hong, F.5
Long, J.A.6
Li, L.7
Moreno, J.E.8
Bowman, M.E.9
Ivans, L.J.10
Cheng, Y.11
Lim, J.12
Zhao, Y.13
Ballare, C.L.14
Sandberg, G.15
Noel, J.P.16
Chory, J.17
-
63
-
-
66649122827
-
Unraveling transcriptional control in Arabidopsis using cis-regulatory elements and coexpression networks
-
Vandepoele, K., Quimbaya, M., Casneuf, T., L., D.V., and, Van de Peer, Y., (2009) Unraveling transcriptional control in Arabidopsis using cis-regulatory elements and coexpression networks. Plant Physiol. 150, 535-546.
-
(2009)
Plant Physiol.
, vol.150
, pp. 535-546
-
-
Vandepoele, K.1
Quimbaya, M.2
Casneuf, T.3
V, L.D.4
Van De Peer, Y.5
-
64
-
-
0028843153
-
Phytochrome A, phytochrome B and HY4 are involved in hypocotyl growth responses to natural radiation in Arabidopsis: Weak de-etiolation of the phyA mutant under dense canopies
-
Yanovsky, M.J., Casal, J.J., and, Whitelam, G.C., (1995) Phytochrome A, phytochrome B and HY4 are involved in hypocotyl growth responses to natural radiation in Arabidopsis: weak de-etiolation of the phyA mutant under dense canopies. Plant Cell Environ. 18, 788-794.
-
(1995)
Plant Cell Environ.
, vol.18
, pp. 788-794
-
-
Yanovsky, M.J.1
Casal, J.J.2
Whitelam, G.C.3
-
65
-
-
0034712843
-
Robust perfect adaptation in bacterial chemotaxis through integral feedback control
-
DOI 10.1073/pnas.97.9.4649
-
Yi, T.M., Huang, Y., Simon, M.I., and, Doyle, J., (2000) Robust perfect adaptation in bacterial chemotaxis through integral feedback control. Proc. Nat. Acad. Sci. USA, 97, 4649-4653. (Pubitemid 30238612)
-
(2000)
Proceedings of the National Academy of Sciences of the United States of America
, vol.97
, Issue.9
, pp. 4649-4653
-
-
Yi, T.-M.1
Huang, Y.2
Simon, M.I.3
Doyle, J.4
-
66
-
-
0030268305
-
The Arabidopsis ELF3 gene regulates vegetative photomorphogenesis and the photoperiodic induction of flowering
-
DOI 10.1046/j.1365-313X.1996.10040691.x
-
Zagotta, M.T., Hicks, K.A., Jacobs, C.I., Young, J.C., Hangarter, R.P., and, Meeks-Wagner, D.R., (1996) The Arabidopsis ELF3 gene regulates vegetative photomorphogenesis and the photoperiodic induction of flowering. Plant J. 10, 691-702. (Pubitemid 27103022)
-
(1996)
Plant Journal
, vol.10
, Issue.4
, pp. 691-702
-
-
Zagotta, M.T.1
Hicks, K.A.2
Jacobs, C.I.3
Young, J.C.4
Hangarter, R.P.5
Meeks-Wagner, D.R.6
|