-
1
-
-
79957877560
-
The evolution of chloroplast genes and genomes in ferns
-
Wolf PG, Der JP, Duffy AM, Davidson JB, Grusz AL, Pryer KM. The evolution of chloroplast genes and genomes in ferns. Plant Mol Biol 2011, 76:251-261.
-
(2011)
Plant Mol Biol
, vol.76
, pp. 251-261
-
-
Wolf, P.G.1
Der, J.P.2
Duffy, A.M.3
Davidson, J.B.4
Grusz, A.L.5
Pryer, K.M.6
-
2
-
-
0032725631
-
Plastid division and development
-
Pyke KA. Plastid division and development. Plant Cell 1999, 11:549-556.
-
(1999)
Plant Cell
, vol.11
, pp. 549-556
-
-
Pyke, K.A.1
-
3
-
-
77958527485
-
The Complete Chloroplast Genome Sequence of Date Palm (Phoenix dactylifera L.)
-
Yang M, Zhang XW, Liu GM, Yin YX, Chen KF, Yun QZ, Zhao DJ, Al-Mssallem IS, Yu J. The Complete Chloroplast Genome Sequence of Date Palm (Phoenix dactylifera L.). Plos One 2010, 5.
-
(2010)
Plos One
, vol.5
-
-
Yang, M.1
Zhang, X.W.2
Liu, G.M.3
Yin, Y.X.4
Chen, K.F.5
Yun, Q.Z.6
Zhao, D.J.7
Al-Mssallem, I.S.8
Yu, J.9
-
4
-
-
77952837838
-
Insights into the Evolution of Mitochondrial Genome Size from Complete Sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae)
-
Alverson AJ, Wei XX, Rice DW, Stern DB, Barry K, Palmer JD. Insights into the Evolution of Mitochondrial Genome Size from Complete Sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae). Mol Biol Evol 2010, 27:1436-1448.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 1436-1448
-
-
Alverson, A.J.1
Wei, X.X.2
Rice, D.W.3
Stern, D.B.4
Barry, K.5
Palmer, J.D.6
-
5
-
-
79251638682
-
The Mitochondrial Genome of the Legume Vigna radiata and the Analysis of Recombination across Short Mitochondrial Repeats
-
Alverson AJ, Zhuo S, Rice DW, Sloan DB, Palmer JD. The Mitochondrial Genome of the Legume Vigna radiata and the Analysis of Recombination across Short Mitochondrial Repeats. Plos One 2011, 6.
-
(2011)
Plos One
, vol.6
-
-
Alverson, A.J.1
Zhuo, S.2
Rice, D.W.3
Sloan, D.B.4
Palmer, J.D.5
-
6
-
-
19944424442
-
Methods for obtaining and analyzing whole chloroplast genome sequences
-
Jansen RK, Raubeson LA, Boore JL, dePamphilis CW, Chumley TW, Haberle RC, Wyman SK, Alverson AJ, Peery R, Herman SJ, et al. Methods for obtaining and analyzing whole chloroplast genome sequences. Methods in enzymology 2005, 395:348-384.
-
(2005)
Methods in enzymology
, vol.395
, pp. 348-384
-
-
Jansen, R.K.1
Raubeson, L.A.2
Boore, J.L.3
dePamphilis, C.W.4
Chumley, T.W.5
Haberle, R.C.6
Wyman, S.K.7
Alverson, A.J.8
Peery, R.9
Herman, S.J.10
-
7
-
-
56149096455
-
Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology
-
Cronn R, Liston A, Parks M, Gernandt DS, Shen R, Mockler T. Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology. Nucleic acids research 2008, 36:e122.
-
(2008)
Nucleic acids research
, vol.36
-
-
Cronn, R.1
Liston, A.2
Parks, M.3
Gernandt, D.S.4
Shen, R.5
Mockler, T.6
-
8
-
-
33748685014
-
Rapid and accurate pyrosequencing of angiosperm plastid genomes
-
Moore M, Dhingra A, Soltis P, Shaw R, Farmerie W, Folta K, Soltis D. Rapid and accurate pyrosequencing of angiosperm plastid genomes. Bmc Plant Biol 2006, 6:17.
-
(2006)
Bmc Plant Biol
, vol.6
, pp. 17
-
-
Moore, M.1
Dhingra, A.2
Soltis, P.3
Shaw, R.4
Farmerie, W.5
Folta, K.6
Soltis, D.7
-
9
-
-
77951914538
-
The chloroplast genome sequence of mungbean (Vigna radiata) determined by high-throughput pyrosequencing: structural organization and phylogenetic relationships
-
Tangphatsornruang S, Sangsrakru D, Chanprasert J, Uthaipaisanwong P, Yoocha T, Jomchai N, Tragoonrung S. The chloroplast genome sequence of mungbean (Vigna radiata) determined by high-throughput pyrosequencing: structural organization and phylogenetic relationships. DNA research: an international journal for rapid publication of reports on genes and genomes 2010, 17:11-22.
-
(2010)
DNA research: an international journal for rapid publication of reports on genes and genomes
, vol.17
, pp. 11-22
-
-
Tangphatsornruang, S.1
Sangsrakru, D.2
Chanprasert, J.3
Uthaipaisanwong, P.4
Yoocha, T.5
Jomchai, N.6
Tragoonrung, S.7
-
10
-
-
0344442430
-
The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana
-
Handa H. The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana. Nucleic acids research 2003, 31:5907-5916.
-
(2003)
Nucleic acids research
, vol.31
, pp. 5907-5916
-
-
Handa, H.1
-
11
-
-
0034235831
-
The complete nucleotide sequence of the mitochondrial genome of sugar beet (Beta vulgaris L.) reveals a novel gene for tRNA(Cys)(GCA)
-
Kubo T, Nishizawa S, Sugawara A, Itchoda N, Estiati A, Mikami T. The complete nucleotide sequence of the mitochondrial genome of sugar beet (Beta vulgaris L.) reveals a novel gene for tRNA(Cys)(GCA). Nucleic acids research 2000, 28:2571-2576.
-
(2000)
Nucleic acids research
, vol.28
, pp. 2571-2576
-
-
Kubo, T.1
Nishizawa, S.2
Sugawara, A.3
Itchoda, N.4
Estiati, A.5
Mikami, T.6
-
12
-
-
0026558482
-
Gene Organization Deduced from the Complete Sequence of Liverwort Marchantia-Polymorpha Mitochondrial-DNA - a Primitive Form of Plant Mitochondrial Genome
-
Oda K, Yamato K, Ohta E, Nakamura Y, Takemura M, Nozato N, Akashi K, Kanegae T, Ogura Y, Kohchi T, Ohyama K. Gene Organization Deduced from the Complete Sequence of Liverwort Marchantia-Polymorpha Mitochondrial-DNA - a Primitive Form of Plant Mitochondrial Genome. J Mol Biol 1992, 223:1-7.
-
(1992)
J Mol Biol
, vol.223
, pp. 1-7
-
-
Oda, K.1
Yamato, K.2
Ohta, E.3
Nakamura, Y.4
Takemura, M.5
Nozato, N.6
Akashi, K.7
Kanegae, T.8
Ogura, Y.9
Kohchi, T.10
Ohyama, K.11
-
13
-
-
11144234440
-
Sequence and comparative analysis of the maize NB mitochondrial genome
-
Clifton SW, Minx P, Fauron CMR, Gibson M, Allen JO, Sun H, Thompson M, Barbazuk WB, Kanuganti S, Tayloe C, et al. Sequence and comparative analysis of the maize NB mitochondrial genome. Plant Physiol 2004, 136:3486-3503.
-
(2004)
Plant Physiol
, vol.136
, pp. 3486-3503
-
-
Clifton, S.W.1
Minx, P.2
Fauron, C.M.R.3
Gibson, M.4
Allen, J.O.5
Sun, H.6
Thompson, M.7
Barbazuk, W.B.8
Kanuganti, S.9
Tayloe, C.10
-
14
-
-
15044341867
-
The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants
-
Sugiyama Y, Watase Y, Nagase M, Makita N, Yagura S, Hirai A, Sugiura M. The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants. Mol Genet Genomics 2005, 272:603-615.
-
(2005)
Mol Genet Genomics
, vol.272
, pp. 603-615
-
-
Sugiyama, Y.1
Watase, Y.2
Nagase, M.3
Makita, N.4
Yagura, S.5
Hirai, A.6
Sugiura, M.7
-
15
-
-
0031021278
-
The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides
-
Unseld M, Marienfeld JR, Brandt P, Brennicke A. The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides. Nat Genet 1997, 15:57-61.
-
(1997)
Nat Genet
, vol.15
, pp. 57-61
-
-
Unseld, M.1
Marienfeld, J.R.2
Brandt, P.3
Brennicke, A.4
-
16
-
-
28544439733
-
Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome
-
Ogihara Y, Yamazaki Y, Murai K, Kanno A, Terachi T, Shiina T, Miyashita N, Nasuda S, Nakamura C, Mori N, et al. Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome. Nucleic acids research 2005, 33:6235-6250.
-
(2005)
Nucleic acids research
, vol.33
, pp. 6235-6250
-
-
Ogihara, Y.1
Yamazaki, Y.2
Murai, K.3
Kanno, A.4
Terachi, T.5
Shiina, T.6
Miyashita, N.7
Nasuda, S.8
Nakamura, C.9
Mori, N.10
-
17
-
-
85040673406
-
Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform
-
Atherton RA, McComish BJ, Shepherd LD, Berry LA, Albert NW, Lockhart PJ. Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform. Plant methods 2010, 6:22.
-
(2010)
Plant methods
, vol.6
, pp. 22
-
-
Atherton, R.A.1
McComish, B.J.2
Shepherd, L.D.3
Berry, L.A.4
Albert, N.W.5
Lockhart, P.J.6
-
18
-
-
0001138481
-
The Plant Mitochondrial Genome: Homologous Recombination as a Mechanism for Generating Heterogeneity
-
Lonsdale DM, Brears T, Hodge TP, Melville SE, Rottmann WH. The Plant Mitochondrial Genome: Homologous Recombination as a Mechanism for Generating Heterogeneity. Philosophical Transactions of the Royal Society of London B, Biological Sciences 1988, 319:149-163.
-
(1988)
Philosophical Transactions of the Royal Society of London B, Biological Sciences
, vol.319
, pp. 149-163
-
-
Lonsdale, D.M.1
Brears, T.2
Hodge, T.P.3
Melville, S.E.4
Rottmann, W.H.5
-
20
-
-
0024259002
-
Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence
-
Palmer JD, Herbon LA. Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence. J Mol Evol 1988, 28:87-97.
-
(1988)
J Mol Evol
, vol.28
, pp. 87-97
-
-
Palmer, J.D.1
Herbon, L.A.2
-
21
-
-
0041664494
-
Effects of dehydration and rehydration on photosynthesis of detached leaves of the resurrective plant Boea hygrometrica
-
Deng X, Hu ZA, Wang HX, Wen XG, Kuang TY. Effects of dehydration and rehydration on photosynthesis of detached leaves of the resurrective plant Boea hygrometrica. Acta Bot Sin 2000, 42:321-323.
-
(2000)
Acta Bot Sin
, vol.42
, pp. 321-323
-
-
Deng, X.1
Hu, Z.A.2
Wang, H.X.3
Wen, X.G.4
Kuang, T.Y.5
-
22
-
-
0042283957
-
A comparison of photosynthetic apparatus of the detached leaves of the resurrection plant Boea hygrometrica with its non-tolerant relative Chirita heterotrichia in response to dehydration and rehydration
-
Deng X, Hu ZA, Wang HX, Wen XG, Kuang TY. A comparison of photosynthetic apparatus of the detached leaves of the resurrection plant Boea hygrometrica with its non-tolerant relative Chirita heterotrichia in response to dehydration and rehydration. Plant Sci 2003, 165:851-861.
-
(2003)
Plant Sci
, vol.165
, pp. 851-861
-
-
Deng, X.1
Hu, Z.A.2
Wang, H.X.3
Wen, X.G.4
Kuang, T.Y.5
-
23
-
-
75049083803
-
The complete mitochondrial genome sequence of the hornwort Phaeoceros laevis: retention of many ancient pseudogenes and conservative evolution of mitochondrial genomes in hornworts
-
Xue JY, Liu Y, Li LB, Wang B, Qiu YL. The complete mitochondrial genome sequence of the hornwort Phaeoceros laevis: retention of many ancient pseudogenes and conservative evolution of mitochondrial genomes in hornworts. Curr Genet 2010, 56:53-61.
-
(2010)
Curr Genet
, vol.56
, pp. 53-61
-
-
Xue, J.Y.1
Liu, Y.2
Li, L.B.3
Wang, B.4
Qiu, Y.L.5
-
24
-
-
79960100341
-
Extreme RNA editing in coding islands and abundant microsatellites in repeat sequences of Selaginella moellendorffii mitochondria: the root of frequent plant mtDNA recombination in early tracheophytes
-
Hecht J, Grewe F, Knoop V. Extreme RNA editing in coding islands and abundant microsatellites in repeat sequences of Selaginella moellendorffii mitochondria: the root of frequent plant mtDNA recombination in early tracheophytes. Genome Biology and Evolution 2011,
-
(2011)
Genome Biology and Evolution
-
-
Hecht, J.1
Grewe, F.2
Knoop, V.3
-
25
-
-
34548410837
-
Transfer of Chloroplast Genomic DNA to Mitochondrial Genome Occurred At Least 300 MYA
-
Wang D, Wu Y-W, Shih AC-C, Wu C-S, Wang Y-N, Chaw S-M. Transfer of Chloroplast Genomic DNA to Mitochondrial Genome Occurred At Least 300 MYA. Mol Biol Evol 2007, 24:2040-2048.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 2040-2048
-
-
Wang, D.1
Wu, Y.-W.2
Shih, A.C.-C.3
Wu, C.-S.4
Wang, Y.-N.5
Chaw, S.-M.6
-
26
-
-
77956846354
-
The Levels of Male Gametic Mitochondrial DNA Are Highly Regulated in Angiosperms with Regard to Mitochondrial Inheritance
-
Wang D-Y, Zhang Q, Liu Y, Lin Z-F, Zhang S-X, Sun M-X, Sodmergen. The Levels of Male Gametic Mitochondrial DNA Are Highly Regulated in Angiosperms with Regard to Mitochondrial Inheritance. The Plant Cell Online 2010, 22:2402-2416.
-
(2010)
The Plant Cell Online
, vol.22
, pp. 2402-2416
-
-
Wang, D.-Y.1
Zhang, Q.2
Liu, Y.3
Lin, Z.-F.4
Zhang, S.-X.5
Sun, M.-X.6
Sodmergen7
-
27
-
-
33845710553
-
The copy number of chloroplast gene minicircles changes dramatically with growth phase in the dinoflagellate Amphidinium operculatum
-
Koumandou VL, Howe CJ. The copy number of chloroplast gene minicircles changes dramatically with growth phase in the dinoflagellate Amphidinium operculatum. Protist 2007, 158:89-103.
-
(2007)
Protist
, vol.158
, pp. 89-103
-
-
Koumandou, V.L.1
Howe, C.J.2
-
28
-
-
80052602947
-
High-throughput sequencing of three lemnoideae (duckweeds) chloroplast genomes from total DNA
-
Wang W, Messing J. High-throughput sequencing of three lemnoideae (duckweeds) chloroplast genomes from total DNA. Plos One 2011, 6:e24670.
-
(2011)
Plos One
, vol.6
-
-
Wang, W.1
Messing, J.2
-
29
-
-
79952305603
-
Chloroplast genome sequences from total DNA for plant identification
-
Nock CJ, Waters DL, Edwards MA, Bowen SG, Rice N, Cordeiro GM, Henry RJ. Chloroplast genome sequences from total DNA for plant identification. Plant biotechnology journal 2011, 9:328-333.
-
(2011)
Plant biotechnology journal
, vol.9
, pp. 328-333
-
-
Nock, C.J.1
Waters, D.L.2
Edwards, M.A.3
Bowen, S.G.4
Rice, N.5
Cordeiro, G.M.6
Henry, R.J.7
-
30
-
-
52649157765
-
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
-
Dohm JC, Lottaz C, Borodina T, Himmelbauer H. Substantial biases in ultra-short read data sets from high-throughput DNA sequencing. Nucleic Acids Res 2008, 36:e105.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Dohm, J.C.1
Lottaz, C.2
Borodina, T.3
Himmelbauer, H.4
-
31
-
-
51649148961
-
A modified CTAB DNA extraction procedure for Musa and Ipomoea
-
Gawel N, Jarret R. A modified CTAB DNA extraction procedure for Musa and Ipomoea. Plant Mol Biol Rep 1991, 9:262-266.
-
(1991)
Plant Mol Biol Rep
, vol.9
, pp. 262-266
-
-
Gawel, N.1
Jarret, R.2
-
32
-
-
84855206740
-
Identification and quantification of genomic repeats and sample contamination in assemblies of 454 pyrosequencing reads
-
Alexander J. Identification and quantification of genomic repeats and sample contamination in assemblies of 454 pyrosequencing reads. 2010,
-
(2010)
-
-
Alexander, J.1
-
33
-
-
69649109364
-
Circos: An information aesthetic for comparative genomics
-
Krzywinski MI, Schein JE, Birol I, Connors J, Gascoyne R, Horsman D, Jones SJ, Marra MA. Circos: An information aesthetic for comparative genomics. Genome Research 2009,
-
(2009)
Genome Research
-
-
Krzywinski, M.I.1
Schein, J.E.2
Birol, I.3
Connors, J.4
Gascoyne, R.5
Horsman, D.6
Jones, S.J.7
Marra, M.A.8
|