A panorama of mammalian gene expression evolution

Molecular Systems Biology

Volumn 7, Issue , 2011, Pages

  Zhang, Jianzhi ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

AMINO ACID SEQUENCE; ARABIDOPSIS; CHIMPANZEE; DNA HYBRIDIZATION; GENE EXPRESSION; GENETIC ASSOCIATION; MAMMALIAN GENETICS; MICROARRAY ANALYSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN FUNCTION; REVIEW; RNA SEQUENCE; ANIMAL; DNA MICROARRAY; EVOLUTION; GENETICS; HUMAN; MAMMAL; MOLECULAR EVOLUTION; NOTE; NUCLEOTIDE SEQUENCE; SEQUENCE ANALYSIS;

MAMMALIA;

ANIMALS; BASE SEQUENCE; BIOLOGICAL EVOLUTION; EVOLUTION, MOLECULAR; GENE EXPRESSION; HUMANS; MAMMALS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SEQUENCE ANALYSIS, RNA;

EID: 82155192951     PISSN: None     EISSN: 17444292     Source Type: Journal    
DOI: 10.1038/msb.2011.86     Document Type: Review

References (10)

1. Brawand D, Soumillon M, Necsulea A, Julien P, Csárdi G, Harrigan P, Weier M, Liechti A, Aximu-Petri A, Kircher M, Albert FW, Zeller U, Khaitovich P, Grutzner F, Bergmann S, Nielsen R, Pääbo S, Kaessmann H (2011) The evolution of gene expression levels in mammalian organs. Nature 478: 343348
2. Khaitovich P, Hellmann I, Enard W, Nowick K, Leinweber M, Franz H, Weiss G, Lachmann M, Paabo S (2005) Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees. Science 309: 18501854
3. King MC, Wilson AC (1975) Evolution at two levels in humans and chimpanzees. Science 188: 107116
4. Liao BY, Weng MP, Zhang J (2010) Impact of extracellularity on the evolutionary rate of mammalian proteins. Genome Biol Evol 2: 3943
5. Liao BY, Zhang J (2006a) Evolutionary conservation of expression profiles between human and mouse orthologous genes. Mol Biol Evol 23: 530540
6. Liao BY, Zhang J (2006b) Low rates of expression profile divergence in highly expressed genes and tissue-specific genes during mammalian evolution. Mol Biol Evol 23: 11191128
7. Qian W, Liao BY, Chang AY, Zhang J (2010) Maintenance of duplicate genes and their functional redundancy by reduced expression. Trends Genet 26: 425430
8. Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, Block D, Zhang J, Soden R, Hayakawa M, Kreiman G, Cooke MP, Walker JR, Hogenesch JB (2004) A gene atlas of the mouse and human protein-encoding transcriptomes. Proc Natl Acad Sci USA 101: 60626067
9. Xiong Y, Chen X, Chen Z, Wang X, Shi S, Zhang J, He X (2010) RNA sequencing shows no dosage compensation of the active X-chromosome. Nat Genet 42: 10431047
10. Yanai I, Graur D, Ophir R (2004) Incongruent expression profiles between human and mouse orthologous genes suggest widespread neutral evolution of transcription control. Omics 8: 1524