Aquatic models, genomics and chemical risk management

Comparative Biochemistry and Physiology - C Toxicology and Pharmacology

Volumn 155, Issue 1, 2012, Pages 169-173

  Cheng, Keith C ^a   Hinton, David E ^b   Mattingly, Carolyn J ^c   Planchart, Antonio ^c  

^a PENN STATE CANCER INSTITUTE   (United States)

^b DUKE UNIVERSITY   (United States)

^c MOUNT DESERT ISLAND BIOLOGICAL LABORATORY   (United States)

Author keywords

Aquatic toxicology; Atlas; Genomics; Phenome project; Zebrafish

Indexed keywords

ENVIRONMENTAL CHEMICAL;

AQUATIC FAUNA; AUTOMATION; BIOINFORMATICS; BIOLOGY; CONFERENCE PAPER; DATA BASE; DRUG RESEARCH; ENVIRONMENTAL EXPOSURE; ENVIRONMENTAL MANAGEMENT; EXPERIMENTAL MODEL; FERAL ANIMAL; GENE FUNCTION; GENOMICS; HUMAN; INTERNET; MORBIDITY; MORPHOMETRICS; MORTALITY; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; RISK MANAGEMENT; SYSTEMS BIOLOGY; TRANSCRIPTOMICS; WATER POLLUTION; WHOLE BODY IMAGING;

ANIMALIA; DANIO RERIO;

EID: 81855207489     PISSN: 15320456     EISSN: 18781659     Source Type: Journal    
DOI: 10.1016/j.cbpc.2011.06.009     Document Type: Conference Paper

References (37)

1. J.F. Amatruda, J.L. Shepard, H.M. Stern, and L.I. Zon Zebrafish as a cancer model system Cancer Cell 3 2002 229 231 (Pubitemid 41039146)
2. S. Barthold, A. Borowsky, C. Brayton, R. Bronson, R. Cardiff, S. Griffey, T. Ince, A. Nitikin, J. Sundberg, and V. Valli From whence will they come? A perspective on the acute shortage of pathologists in biomedical research J Vet. Diagn. Invest. 19 2007 455 456 (Pubitemid 351202234)
3. O. Betz, U. Wegst, D. Weide, M. Heethhoff, L. Helpen, W.K. Lee, and P. Cloetens J. Microsc. 227 2007 51 71
4. Cheung, N.K.M., Hinton, D.E., and Au, D.W.T. in Press. Development of high-throughput embryo histoarray for quantitative molecular profiling in uniformly orientated medaka (Oryzias latipes) embryos. Comp Biochem Physiol C Toxicol Pharmacol. doi: 10.1016/j.cbpc.2011.05.010.
5. F.S. Collins, G.M. Gray, and J.R. Bucher Toxicology. Transforming environmental health protection. Science 319 2008 906 907
6. Council on Environmental Health Policy statement-chemical-management policy: prioritizing children's health Pediatrics 127 2011 983 990
7. A.P. Davis, B.L. King, S. Mockus, C.G. Murphy, C. Saraceni-Richards, M. Rosenstein, T. Wiegers, and C.J. Mattingly The comparative toxicogenomics database: update Nucleic Acids Res. 39 2011 D1067 72 (Database issue)
8. R.T. Di Giulio, and D.E. Hinton The Toxicology of Fishes 2008 CRC Press, Taylor and Francis Group Boca Raton 1071 pages
9. P.M. Eimon, and A.L. Rubinstein The use of in vivo zebrafish assays in drug toxicity screening Expert Opinion Drug Metabol. Toxicol. 5 2009 393 401
10. G.S. Gerhard Small laboratory fish as models for aging research Ageing Res. Rev. 6 2007 64 72 (Pubitemid 46635290)
11. J.M. Gohlke, R. Thomas, Y. Zhang, M.C. Rosenstein, A.P. Davis, C. Murphy, K.G. Becker, C.J. Mattingly, and C.J. Portier Genetic and environmental pathways to complex diseases BMC Syst. Biol. 3 2009 46 60
12. M.E. Hahn, and E.V. Hestermann Receptor-mediated mechanisms of toxicity R.T. Di Giulio, D.E. Hinton, The Toxicology of Fishes 2008 CRC Press, Taylor and Francis Group Boca Raton 235 272
13. Aquatic animal models of human disease: selected papers and recommendations from the 4th Conference, Durham, NC, USA, January 31-February 3, 2008 D.E. Hinton, R.C. Hardman, S.W. Kullman, J.M. Law, M.C. Schmale, R.B. Walter, R.N. Winn, and J.A. Yoder Comp Biochem Physiol, Part C 149 2009 121 128
14. J. Huisken, J. Swoger, F. Del Bene, J. Wittbrodt, and E.H.K. Stelzer Optical sectioning deep inside live embryos by selective plane illumination microscopy Science 305 2004 1007 1009 (Pubitemid 39071776)
15. C.J. Jeffery Multifunctional proteins: examples of gene sharing Ann. Med. 35 2003 28 35 (Pubitemid 36356871)
16. L.L. Johnson, M.R. Arkoosh, C.F. Bravo, T.C. Collier, M.M. Krahn, J.P. Meador, M.S. Myers, W.L. Reichert, and J.E. Stein The effects of polycyclic aromatic hydrocarbons in fish from Puget Sound, Washington R.T. Di Giulio, D.E. Hinton, The Toxicology of Fishes 2008 CRC Press, Taylor and Francis Group Boca Raton 902 912
17. R. Judson, A. Richard, D.J. Dix, K. Houck, M. Martin, R. Kavlock, V. Dellarco, T. Henry, T. Holderman, P. Sayre, S. Tan, T. Carpenter, and E. Smith The toxicity data landscape for environmental chemicals Environ. Health Perspect. 117 2009 685 695
18. R.J. Kavlock, C.P. Austin, and R.R. Tice Toxicity testing in the 21st century: implications for human risk assessment Risk Anal. 29 2009 485 487
19. R.L. Lamason, M.-A.P. Mohideen, J.R. Mest, A.C. Wong, H.L. Norton, M.C. Aros, M.J. Jurynec, X. Mao, V.R. Humphreville, J.E. Humbert, S. Sinha, J.L. Moore, P. Jagadeeswaran, G. Ning, I. Makalowska, W. Zhao, P.M. McKeigue, D. O'Donnell, R. Kittles, E.J. Parra, N.J. Mangini, D.J. Grunwald, M.D. Shriver, V.A. Canfield, and K.C. Cheng SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans Science 310 2005 1782 1786 (Pubitemid 41814374)
20. C.J. Mattingly Chemical databases for environmental health and clinical research Toxicol. Lett. 186 2009 62 65
21. C.J. Mattingly, T.H. Hampton, K.M. Brothers, N.E. Griffin, and A. Planchart Perturbation of defense pathways by low-dose arsenic exposure in zebrafish embryos Environ. Health Perspect. 117 2009 981 987
22. D. McAloose, and A.L. Newton Wildlife cancer: a conservation perspective Nat. Rev. Cancer 9 2009 517 526
23. S.G. Megason, and S.E. Fraser Digitizing life at the level of the cell: high-performance laser-scanning microscopy and image analysis for in toto imaging of development Mech. Dev. 120 2003 1407 1420 (Pubitemid 37421171)
24. S. Meierjohann, and M. Schartl From Mendelian to molecular genetics: The Xiphophorus melanoma model Trends Genet. 22 2006 654 661 (Pubitemid 44738129)
25. B.D. Metscher MicroCT for developmental biology: a versatile tool for high-contrast 3D imaging at histological resolutions Dev. Dyn. 238 2009 632 640
26. R.S. Nairn, M.C. Schmale, J. Stegeman, R.N. Winn, and R.B. Walter Aquaria fish models of human disease: reports and recommendations from the working groups Mar. Biotechnol. 3 2001 S249 S258
27. T.E. North, and L.I. Zon Modeling human hematopoietic and cardiovascular diseases in zebrafish Dev. Dyn. 228 2003 568 583 (Pubitemid 37372776)
28. K.D. Poss Getting to the heart of regeneration in zebrafish Semin. Cell Dev. Biol. 18 2007 36 45 (Pubitemid 46330843)
29. N.A. Sabaliauskas, C.A. Foutz, J.R. Mest, L.R. Budgeon, A. Sidor, J. Gershenson, S. Joshi, and K.C. Cheng High-throughput zebrafish histology Methods 39 2006 246 254 (Pubitemid 44189880)
30. M.C. Schmale Aquatic animal models of human disease Comp. Biochem. Physiol. C Toxicol. Pharmacol. 138 2004 229 231 (Pubitemid 39469057)
31. M.C. Schmale, R.S. Nairn, and R.N. Winn Aquatic animal models of human disease Comp. Biochem. Physiol. C Toxicol. Pharmacol. 145 2007 1 4 (Pubitemid 46210204)
32. S.R. Stock MicroComputed Tomography: Methodology and Applications 2009 CRC Press
33. A. Stone, and D. Delistraty Sources of toxicity and exposure information for identifying chemical of high concern to children Environ. Impact Assessment Rev. 30 2010 380 387
34. R. Virchow Die Cellular Pathology 1858 August Hirschwald Berlin
35. M. Waters, S. Stasiewicz, B.A. Merrick, K. Tomer, P. Bushel, R. Paules, N. Stegman, G. Nehls, K.J. Yost, C.H. Johnson, S.F. Gustafson, S. Xirasagar, N. Xiao, C.C. Huang, P. Boyer, D.D. Chan, Q. Pan, H. Gong, J. Taylor, D. Choi, A. Rashid, A. Ahmed, R. Howle, J. Selkirk, R. Tennant, and J. Fostel CEBS-Chemical Effects in Biological Systems: a public data repository integrating study design and toxicity data with microarray and proteomics data Nucleic Acids Res. 36 2008 D892 D900 (Pubitemid 351149841)
36. R.M. White, and L.I. Zon Melanocytes in development, regeneration, and cancer Cell Stem Cell 3 2008 242 252
37. L. Zou, S. Sriswasdi, B. Ross, P.V. Missiuro, J. Liu, and H. Ge Systematic analysis of pleiotropy in C. elegans early embryogenesis PLoS Comput. Biol. 4 2008 e1000003