메뉴 건너뛰기




Volumn 6, Issue 11, 2011, Pages

Reviewing the history of HIV-1: Spread of subtype B in the Americas

Author keywords

[No Author keywords available]

Indexed keywords

ANALYSIS OF VARIANCE; ARTICLE; BAYES THEOREM; CENTRAL AMERICA; CLADISTICS; CUBA; EPIDEMIC; GENE SEQUENCE; GENE STRUCTURE; GEOGRAPHIC DISTRIBUTION; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS 1B; MAXIMUM LIKELIHOOD METHOD; MICROBIAL POPULATION DYNAMICS; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; PANDEMIC; PHYLOGENETIC TREE; PHYLOGENY; POPULATION DISPERSAL; POPULATION MIGRATION; SOUTH AMERICA; STATISTICAL ANALYSIS; STRUCTURAL GENE; UNINDEXED SEQUENCE; UNITED STATES; VIRAL GENETICS; CLASSIFICATION; DISEASE TRANSMISSION; GENETICS; HISTORY; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; ISOLATION AND PURIFICATION; REVIEW; VIROLOGY; WESTERN HEMISPHERE;

EID: 81755166544     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0027489     Document Type: Article
Times cited : (35)

References (51)
  • 1
    • 81755178899 scopus 로고    scopus 로고
    • The African Aids Epidemic: A History
    • Osseo-Asare AD, (2007) The African Aids Epidemic: A History. Social History of Medicine 20: 401-402.
    • (2007) Social History of Medicine , vol.20 , pp. 401-402
    • Osseo-Asare, A.D.1
  • 2
    • 77954594423 scopus 로고    scopus 로고
    • Dynamics and Control of Diseases in Networks with Community Structure
    • Salathé M, Jones JH, (2010) Dynamics and Control of Diseases in Networks with Community Structure. PLoS Computational Biology 6: 11.
    • (2010) PLoS Computational Biology , vol.6 , pp. 11
    • Salathé, M.1    Jones, J.H.2
  • 3
    • 70249113753 scopus 로고    scopus 로고
    • Spatial phylodynamics of HIV-1 epidemic emergence in east Africa
    • Gray RR, Tatem AJ, Lamers S, Hou W, Laeyendecker O, et al. (2009) Spatial phylodynamics of HIV-1 epidemic emergence in east Africa. AIDS 23: F9-F17.
    • (2009) AIDS , vol.23
    • Gray, R.R.1    Tatem, A.J.2    Lamers, S.3    Hou, W.4    Laeyendecker, O.5
  • 7
    • 0037221414 scopus 로고    scopus 로고
    • Travel and the spread of HIV-1 genetic variants
    • Perrin L, Kaiser L, Yerly S, (2003) Travel and the spread of HIV-1 genetic variants. The Lancet 3: 22-27.
    • (2003) The Lancet , vol.3 , pp. 22-27
    • Perrin, L.1    Kaiser, L.2    Yerly, S.3
  • 8
    • 84862755572 scopus 로고    scopus 로고
    • Close phylogenetic relationship between Angolan and Romanian HIV-1 subtype F1 isolates
    • Guimarães ML, Vicente AC, Otsuki K, da Silva RF, Francisco M, et al. (2009) Close phylogenetic relationship between Angolan and Romanian HIV-1 subtype F1 isolates. Retrovirology 1958: 1-11.
    • (2009) Retrovirology , vol.1958 , pp. 1-11
    • Guimarães, M.L.1    Vicente, A.C.2    Otsuki, K.3    da Silva, R.F.4    Francisco, M.5
  • 10
    • 53349127137 scopus 로고    scopus 로고
    • Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960
    • Worobey M, Gemmel M, Teuwen DE, Haselkorn T, Kunstman K, et al. (2008) Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960. Nature 455: 661-664.
    • (2008) Nature , vol.455 , pp. 661-664
    • Worobey, M.1    Gemmel, M.2    Teuwen, D.E.3    Haselkorn, T.4    Kunstman, K.5
  • 11
    • 0033755804 scopus 로고    scopus 로고
    • Unprecedented degree of human immunodeficiency virus type 1 (HIV-1) group M genetic diversity in the Democratic Republic of Congo suggests that the HIV-1 pandemic originated in Central Africa
    • Vidal N, Peeters M, Mulanga-Kabeya C, Nzilambi N, Robertson D, et al. (2000) Unprecedented degree of human immunodeficiency virus type 1 (HIV-1) group M genetic diversity in the Democratic Republic of Congo suggests that the HIV-1 pandemic originated in Central Africa. Journal of virology 74: 10498-507.
    • (2000) Journal of Virology , vol.74 , pp. 10498-10507
    • Vidal, N.1    Peeters, M.2    Mulanga-Kabeya, C.3    Nzilambi, N.4    Robertson, D.5
  • 13
    • 0024267430 scopus 로고
    • Fidelity of HIV-1 reverse transcriptase
    • Preston BD, Poiesz BJ, Loeb LA, (1988) Fidelity of HIV-1 reverse transcriptase. Science 242: 1168-1171.
    • (1988) Science , vol.242 , pp. 1168-1171
    • Preston, B.D.1    Poiesz, B.J.2    Loeb, L.A.3
  • 14
    • 0028811974 scopus 로고
    • Viral dynamics in human immunodeficiency virus type 1 infection
    • Wei X, Ghosh SK, Taylor ME, Johnson VA, Emini EA, et al. (1995) Viral dynamics in human immunodeficiency virus type 1 infection. Nature 373: 117-122.
    • (1995) Nature , vol.373 , pp. 117-122
    • Wei, X.1    Ghosh, S.K.2    Taylor, M.E.3    Johnson, V.A.4    Emini, E.A.5
  • 15
    • 0020532060 scopus 로고
    • Isolation of human T-cell leukemia virus in acquired immune deficiency syndrome (AIDS)
    • Gallo RC, Sarin PS, Gelmann EP, Robert-Guroff M, Richardson E, et al. (1983) Isolation of human T-cell leukemia virus in acquired immune deficiency syndrome (AIDS). Science 220: 865-867.
    • (1983) Science , vol.220 , pp. 865-867
    • Gallo, R.C.1    Sarin, P.S.2    Gelmann, E.P.3    Robert-Guroff, M.4    Richardson, E.5
  • 16
    • 0020596551 scopus 로고
    • Isolation of a T-lymphotropic retrovirus from a patient at risk for AIDS
    • Barré-Sinoussi F, Chermann JC, Rey F, Nugeyre MT, Chamaret S, et al. (1983) Isolation of a T-lymphotropic retrovirus from a patient at risk for AIDS. Science 220: 868-870.
    • (1983) Science , vol.220 , pp. 868-870
    • Barré-Sinoussi, F.1    Chermann, J.C.2    Rey, F.3    Nugeyre, M.T.4    Chamaret, S.5
  • 18
    • 0033823318 scopus 로고    scopus 로고
    • Emerging genetic diversity of HIV-1 in South America
    • Russell KL, Carcamo C, Watts DM, Sanchez J, Gotuzzo E, et al. (2000) Emerging genetic diversity of HIV-1 in South America. AIDS 14 (12): 1785-1791.
    • (2000) AIDS , vol.14 , Issue.12 , pp. 1785-1791
    • Russell, K.L.1    Carcamo, C.2    Watts, D.M.3    Sanchez, J.4    Gotuzzo, E.5
  • 19
  • 20
    • 33750253231 scopus 로고    scopus 로고
    • Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004
    • Hemelaar J, Gouws E, Ghys PD, Osmanov S, (2006) Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004. AIDS 20: W13-23.
    • (2006) AIDS , vol.20
    • Hemelaar, J.1    Gouws, E.2    Ghys, P.D.3    Osmanov, S.4
  • 24
    • 72949104925 scopus 로고    scopus 로고
    • Evolution and molecular epidemiology of subtype C HIV-1 in Zimbabwe
    • Dalai SC, de Oliveira T, Harkins GW, Kassaye SG, Lint J, et al. (2009) Evolution and molecular epidemiology of subtype C HIV-1 in Zimbabwe. AIDS 23: 2523-32.
    • (2009) AIDS , vol.23 , pp. 2523-2532
    • Dalai, S.C.1    de Oliveira, T.2    Harkins, G.W.3    Kassaye, S.G.4    Lint, J.5
  • 25
    • 77949517192 scopus 로고    scopus 로고
    • The HIV-1 subtype C epidemic in South America is linked to the United Kingdom
    • Oliveira Tde, Pillay D, Gifford RJ, (2010) The HIV-1 subtype C epidemic in South America is linked to the United Kingdom. PloS one 5: e9311.
    • (2010) PloS One , vol.5
    • de Oliveira, T.1    Pillay, D.2    Gifford, R.J.3
  • 26
    • 0034529510 scopus 로고    scopus 로고
    • Trends in international migration in Latin America and the Caribbean
    • Pellegrino A, (2000) Trends in international migration in Latin America and the Caribbean. International Social Science Journal 52: 395-408.
    • (2000) International Social Science Journal , vol.52 , pp. 395-408
    • Pellegrino, A.1
  • 27
    • 0012495183 scopus 로고    scopus 로고
    • International migration and the global economic order: An overview
    • Working Paper - International Economics, Trade, Capital Flows, No. 2720. Washington DC, World Bank
    • Solimano A, (2001) International migration and the global economic order: An overview. Working Paper - International Economics, Trade, Capital Flows, No. 2720. Washington DC, World Bank.
    • (2001)
    • Solimano, A.1
  • 28
    • 81755186803 scopus 로고    scopus 로고
    • Processes of Migration in Latin America and the Caribbean (1950-2008)
    • UNDP Research Paper 2009/24
    • Durand J, (2009) Processes of Migration in Latin America and the Caribbean (1950-2008). UNDP Research Paper 2009/24.
    • (2009)
    • Durand, J.1
  • 29
    • 34247647904 scopus 로고    scopus 로고
    • Extensive intrasubtype recombination in South African human immunodeficiency virus type 1 subtype C infections
    • Rousseau CM, Learn GH, Bhattacharya T, Nickle DC, Heckerman D, et al. (2007) Extensive intrasubtype recombination in South African human immunodeficiency virus type 1 subtype C infections. Journal of virology 81: 4492-500.
    • (2007) Journal of Virology , vol.81 , pp. 4492-4500
    • Rousseau, C.M.1    Learn, G.H.2    Bhattacharya, T.3    Nickle, D.C.4    Heckerman, D.5
  • 31
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792-1797.
    • (2004) Nucleic Acids Research , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 33
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC evolutionary biology 7: 214.
    • (2007) BMC Evolutionary Biology , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 34
    • 39149140178 scopus 로고    scopus 로고
    • Tracer [computer program]
    • Available at:. Acessed 2010 October
    • Rambaut A, Drummond AJ, (2003) Tracer [computer program]. Available at: http://beast.bio.ed.ac.uk/tracer/. Acessed 2010 October.
    • (2003)
    • Rambaut, A.1    Drummond, A.J.2
  • 35
    • 84890417804 scopus 로고
    • The genetical structure of populations
    • Wright S, (1951) The genetical structure of populations. Annals of Eugenics 15: 323-354.
    • (1951) Annals of Eugenics , vol.15 , pp. 323-354
    • Wright, S.1
  • 36
    • 0026681074 scopus 로고
    • Analysis of Molecular Variance Inferred From Metric Distances Among DNA Haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier L, Smouse PE, Quattro JM, (1992) Analysis of Molecular Variance Inferred From Metric Distances Among DNA Haplotypes: Application to human mitochondrial DNA restriction data. Genetics 491: 479-491.
    • (1992) Genetics , vol.491 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 37
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: An integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S, (2005) Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics 1: 47-50.
    • (2005) Evolutionary Bioinformatics , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 39
    • 0032966973 scopus 로고    scopus 로고
    • What role does HIV-1 subtype play in transmission and pathogenesis? An epidemiological perspective
    • Hu DJ, Buvé A, Baggs J, Groen Gvan der, Dondero TJ, (1999) What role does HIV-1 subtype play in transmission and pathogenesis? An epidemiological perspective. AIDS 13: 873-81.
    • (1999) AIDS , vol.13 , pp. 873-881
    • Hu, D.J.1    Buvé, A.2    Baggs, J.3    van der Groen, G.4    Dondero, T.J.5
  • 40
    • 77956489846 scopus 로고    scopus 로고
    • Epidemiological study of phylogenetic transmission clusters in a local HIV-1 epidemic reveals distinct differences between subtype B and non-B infections
    • Chalmet K, Staelens D, Blot S, Dinakis S, Pelgrom J, et al. (2010) Epidemiological study of phylogenetic transmission clusters in a local HIV-1 epidemic reveals distinct differences between subtype B and non-B infections. BMC infectious diseases 10: 262.
    • (2010) BMC Infectious Diseases , vol.10 , pp. 262
    • Chalmet, K.1    Staelens, D.2    Blot, S.3    Dinakis, S.4    Pelgrom, J.5
  • 41
    • 0038026990 scopus 로고    scopus 로고
    • U.S. Human Immunodeficiency Virus Type 1 Epidemic: Date of Origin, Population History, and Characterization of Early Strains
    • Robbins KE, Lemey P, Pybus OG, Jaffe HW, Youngpairoj AS, et al. (2003) U.S. Human Immunodeficiency Virus Type 1 Epidemic: Date of Origin, Population History, and Characterization of Early Strains. Journal of Virology 77: 6359-6366.
    • (2003) Journal of Virology , vol.77 , pp. 6359-6366
    • Robbins, K.E.1    Lemey, P.2    Pybus, O.G.3    Jaffe, H.W.4    Youngpairoj, A.S.5
  • 43
    • 0036213160 scopus 로고    scopus 로고
    • Recent evolutionary history of human immunodeficiency virus type 1 subtype B: reconstruction of epidemic onset based on sequence distances to the common ancestor
    • Lukashov VV, Goudsmit J, (2002) Recent evolutionary history of human immunodeficiency virus type 1 subtype B: reconstruction of epidemic onset based on sequence distances to the common ancestor. Journal of Molecular Evolution 54: 680-691.
    • (2002) Journal of Molecular Evolution , vol.54 , pp. 680-691
    • Lukashov, V.V.1    Goudsmit, J.2
  • 44
    • 77955593665 scopus 로고    scopus 로고
    • Diversity of HIV-1 Subtype B: Implications to the Origin of BF Recombinants
    • Leal É, VillaNova F, (2010) Diversity of HIV-1 Subtype B: Implications to the Origin of BF Recombinants. PLoS ONE 5 (7): e11833.
    • (2010) PLoS ONE , vol.5 , Issue.7
    • Leal, E.1    VillaNova, F.2
  • 48
    • 34047224914 scopus 로고    scopus 로고
    • Measures of clade confidence do not correlate with accuracy of phylogenetic trees
    • Hall BG, Salipante SJ, (2007) Measures of clade confidence do not correlate with accuracy of phylogenetic trees. PLoS Computational Biology 3 (3): e51.
    • (2007) PLoS Computational Biology , vol.3 , Issue.3
    • Hall, B.G.1    Salipante, S.J.2
  • 49
    • 2142768288 scopus 로고    scopus 로고
    • HIV-1 pol gene variation is sufficient for reconstruction of transmissions in the era of antiretroviral therapy
    • Clewley JP, Cane PA, Pillay D, (2004) HIV-1 pol gene variation is sufficient for reconstruction of transmissions in the era of antiretroviral therapy. AIDS 18 (5): 719-28.
    • (2004) AIDS , vol.18 , Issue.5 , pp. 719-728
    • Clewley, J.P.1    Cane, P.A.2    Pillay, D.3
  • 50
    • 0020681689 scopus 로고
    • Opportunistic infections and Kaposi's sarcoma among Haitians: Evidence of a new acquired immunodeficiency state
    • Pitchenik AE, Fischl MA, Dickinson GM, Becker DM, Fournier AM, et al. (1983) Opportunistic infections and Kaposi's sarcoma among Haitians: Evidence of a new acquired immunodeficiency state. Annals of Internal Medicine 98: 277-284.
    • (1983) Annals of Internal Medicine , vol.98 , pp. 277-284
    • Pitchenik, A.E.1    Fischl, M.A.2    Dickinson, G.M.3    Becker, D.M.4    Fournier, A.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.