Ontogeny of globin expression in zebrafish (Danio rerio)

Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology

Volumn 181, Issue 8, 2011, Pages 1011-1021

  Tiedke, Jessica ^a   Gerlach, Frank ^a   Mitz, Stephanie A ^b   Hankeln, Thomas ^c   Burmester, Thorsten ^a  

^a UNIVERSITY OF HAMBURG   (Germany)

^b UNIVERSITY MEDICAL CENTER MAINZ   (Germany)

^c JOHANNES GUTENBERG UNIVERSITY   (Germany)

Author keywords

Cytoglobin; Danio rerio; Embryogenesis; Hemoglobin; Myoglobin; Neuroglobin; Oxygen; Zebrafish

Indexed keywords

CYTOGLOBIN; GLOBIN; HEMOGLOBIN; MESSENGER RNA; MYOGLOBIN; NERVE PROTEIN; NEUROGLOBIN; ZEBRAFISH PROTEIN;

ANIMAL; ANIMAL EMBRYO; ARTICLE; EMBRYO DEVELOPMENT; GENE EXPRESSION; GENETICS; LARVA; METABOLISM; OOCYTE; PHYLOGENY; PRENATAL DEVELOPMENT; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ZEBRA FISH; ZYGOTE;

ANIMALS; EMBRYO, NONMAMMALIAN; EMBRYONIC DEVELOPMENT; GENE EXPRESSION; GLOBINS; HEMOGLOBINS; LARVA; MYOGLOBIN; NERVE TISSUE PROTEINS; OOCYTES; OVUM; PHYLOGENY; REAL-TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; ZEBRAFISH; ZEBRAFISH PROTEINS; ZYGOTE;

DANIO RERIO; VERTEBRATA;

EID: 81355123377     PISSN: 01741578     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00360-011-0588-9     Document Type: Article

References (51)

1. Abascal F, Zardoya R, Posada D (2005) Prottest: selection of best-fit models of protein evolution. Bioinformatics 21: 2104-2105.
2. Bauer C, Tamm R, Petschow D, Bartels R, Bartels H (1975) Oxygen affinity and allosteric effects of embryonic mouse haemolglobins. Nature 257: 333-334.
3. Bentmann A, Schmidt M, Reuss S, Wolfrum U, Hankeln T, Burmester T (2005) Divergent distribution in vascular and avascular mammalian retinae links neuroglobin to cellular respiration. J Biol Chem 280: 20660-20665.
4. Brownlie A, Hersey C, Oates AC, Paw BH, Falick AM, Witkowska HE, Flint J, Higgs D, Jessen J, Bahary N, Zhu H, Lin S, Zon L (2003) Characterization of embryonic globin genes of the zebrafish. Dev Biol 255: 48-61.
5. Brunori M (1975) Molecular adaptation to physiological requirements: the hemoglobin system of trout. Curr Top Cell Regul 9: 1-39.
6. Brunori M, Giuffre A, Nienhaus K, Nienhaus GU, Scandurra FM, Vallone B (2005) Neuroglobin, nitric oxide, and oxygen: functional pathways and conformational changes. Proc Natl Acad Sci U S A 102: 8483-8488.
7. Burmester T, Hankeln T (2009) What is the function of neuroglobin? J Exp Biol 212: 1423-1428.
8. Burmester T, Weich B, Reinhardt S, Hankeln T (2000) A vertebrate globin expressed in the brain. Nature 407: 520-523.
9. Burmester T, Ebner B, Weich B, Hankeln T (2002) Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues. Mol Biol Evol 19: 416-421.
10. Bustin S (2002) Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. J Mol Endocrin 29: 23-39.
11. Chan FY, Robinson J, Brownlie A, Shivdasani RA, Donovan A, Brugnara C, Kim J, Lau BC, Witkowska HE, Zon LI (1997) Characterization of adult alpha- and beta-globin genes in the zebrafish. Blood 89: 688-700.
12. Coates ML (1975) Hemoglobin function in the vertebrates: an evolutionary model. J Mol Evol 6: 285-307.
13. Dickerson RE, Geis I (1983) Hemoglobin. The Benjamin/Cummings, Menlo Park, California.
14. Fago A, Hundahl C, Malte H, Weber RE (2004) Functional properties of neuroglobin and cytoglobin. Insights into the ancestral physiological roles of globins. IUBMB Life 56: 689-696.
15. Fraser J, de Mello LV, Ward D, Rees HH, Williams DR, Fang Y, Brass A, Gracey AY, Cossins AR (2006) Hypoxia-inducible myoglobin expression in nonmuscle tissues. Proc Natl Acad Sci USA 103: 2977-2981.
16. Fuchs C, Heib V, Kiger L, Haberkamp M, Roesner A, Schmidt M, Hamdane D, Marden MC, Hankeln T, Burmester T (2004) Zebrafish reveals different and conserved features of vertebrate neuroglobin gene structure, expression pattern, and ligand binding. J Biol Chem 279: 24116-24122.
17. Fuchs C, Luckhardt A, Gerlach F, Burmester T, Hankeln T (2005) Duplicated cytoglobin genes in teleost fishes. Biochem Biophys Res Commun 337: 216-223.
18. 2) on hemoglobin oxygen saturation in developing zebrafish Danio rerio. J Exp Biol 208: 309-316.
19. Hankeln T, Ebner B, Fuchs C, Gerlach F, Haberkamp M, Laufs TL, Roesner A, Schmidt M, Weich B, Wystub S, Saaler-Reinhardt S, Reuss S, Bolognesi M, De Sanctis D, Marden MC, Kiger L, Moens L, Dewilde S, Nevo E, Avivi A, Weber RE, Fago A, Burmester T (2005) Neuroglobin and cytoglobin in search of their role in the vertebrate globin family. J Inorg Biochem 99: 110-119.
20. Hartley SE, Horne MT (1984) Chromosome polymorphism and constitutive heterochromatin in the Atlantic salmon, Salmo salar. Chromosoma 89: 377-380.
21. Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
22. Iuchi I (1973) Chemical and physiological properties of the larval and the adult hemoglobins in rainbow trout, Salmo gairdnerii irideus. Comp Biochem Physiol B 44: 1087-1101.
23. Johnson KR, Wright JE Jr, May B (1987) Linkage relationships reflecting ancestral tetraploidy in salmonid fish. Genetics 116: 579-591.
24. Jonz MG, Nurse CA (2005) Development of oxygen sensing in the gills of zebrafish. J Exp Biol 208: 1537-1549.
25. Kimmel CB, Ballard WW, Kimmel SR, Ullmann B, Schilling TF (1995) Stages of embryonic development of the zebrafish. Dev Dyn 203: 253-310.
26. Larhammar D, Risinger C (1994) Molecular genetic aspects of tetraploidy in the common carp Cyprinus carpio. Mol Phylogenet Evol 3: 59-68.
27. Malicki J, Neuhauss SCF, Schier AFS-K L, Stemple DL, Didier Y, Stainier R, Abdelilah S, Zwartkruis F, Rangini Z, Driever W (2005) Mutations affecting development of the zebrafish retina. Development 123: 263-273.
28. Mammen PP, Shelton JM, Ye Q, Kanatous SB, McGrath AJ, Richardson JA, Garry DJ (2006) Cytoglobin is a stress-responsive hemoprotein expressed in the developing and adult brain. J Histochem Cytochem 54: 1349-1361.
29. Maruyama K, Yasumasu S, Iuchi I (1999) Characterization and expression of embryonic globin in the rainbow trout, Oncorhynchus mykiss: intra-embryonic initiation of erythropoiesis. Dev Growth Differ 41: 589-599.
30. Meeson AP, Radford N, Shelton JM, Mammen PP, DiMaio JM, Hutcheson K, Kong Y, Elterman J, Williams RS, Garry DJ (2001) Adaptive mechanisms that preserve cardiac function in mice without myoglobin. Circ Res 88: 713-720.
31. Mitz SA, Reuss S, Folkow LP, Blix AS, Ramirez JM, Hankeln T, Burmester T (2009) When the brain goes diving: glial oxidative metabolism may confer hypoxia tolerance to the seal brain. Neuroscience 163: 552-560.
32. Miyamura Y, Nakayasu H (2001) Zonal distribution of Purkinje cells in the zebrafish cerebellum: analysis by means of a specific monoclonal antibody. Cell Tissue Res 305: 299-305.
33. Nicholas KB, Nicholas HBJ (1997) GeneDoc: analysis and visualization of genetic variation. http://wwwpscedu/biomed/genedoc/.
34. Pelster B, Burggren WW (1996) Disruption of hemoglobin oxygen transport does not impact oxygen-dependent physiological processes in developing embryos of zebra fish (Danio rerio). Circ Res 79: 358-362.
35. Perutz MF (1960) Structure of hemoglobin. Brookhaven Symp Biol 13: 165-183.
36. Ransom DG, Haffter P, Odenthal J, Brownlie A, Vogelsang E, Kelsh RN, Brand M, van Eeden FJ, Furutani-Seiki M, Granato M, Hammerschmidt M, Heisenberg CP, Jiang YJ, Kane DA, Mullins MC, Nusslein-Volhard C (1996) Characterization of zebrafish mutants with defects in embryonic hematopoiesis. Development 123: 311-319.
37. Reuss S, Saaler-Reinhardt S, Weich B, Wystub S, Reuss MH, Burmester T, Hankeln T (2002) Expression analysis of neuroglobin mRNA in rodent tissues. Neuroscience 115: 645-656.
38. Roesner A, Fuchs C, Hankeln T, Burmester T (2005) A globin gene of ancient evolutionary origin in lower vertebrates: evidence for two distinct globin families in animals. Mol Biol Evol 22: 12-20.
39. Roesner A, Hankeln T, Burmester T (2006) Hypoxia induces a complex response of globin expression in zebrafish (Danio rerio). J Exp Biol 209: 2129-2137.
40. Roesner A, Mitz SA, Hankeln T, Burmester T (2008) Globins and hypoxia adaptation in the goldfish, Carassius auratus. FEBS J 275: 3633-3643.
41. Rombough P, Drader H (2009) Hemoglobin enhances oxygen uptake in larval zebrafish (Danio rerio) but only under conditions of extreme hypoxia. J Exp Biol 212: 778-784.
42. Schmidt M, Gerlach F, Avivi A, Laufs T, Wystub S, Simpson JC, Nevo E, Saaler-Reinhardt S, Reuss S, Hankeln T, Burmester T (2004) Cytoglobin is a respiratory protein in connective tissue and neurons, which is up-regulated by hypoxia. J Biol Chem 279: 8063-8069.
43. Sprague J, Bayraktaroglu L, Clements D, Conlin T, Fashena D, Frazer K, Haendel M, Howe D, Mani P, Ramachandran S, Schaper K, Segerdell E, Song P, Sprunger B, Taylor S, van Slyke C, Westerfield M (2006) The zebrafish information network: the zebrafish model organism database. Nucl Acids Res 34: D581-D585.
44. Stainier DY, Lee RK, Fishman MC (1993) Cardiovascular development in the zebrafish. I. Myocardial fate map and heart tube formation. Development 119: 31-40.
45. Stamatoyannopoulos G (1991) Human hemoglobin switching. Science 252: 383.
46. van Blerkom J, Davis PW, Lee J (1995) ATP content of human oocytes and developmental potential and outcome after in vitro fertilization and embryo transfer. Hum Reprod 10: 415-424.
47. van der Meer DL, van den Thillart GE, Witte F, de Bakker MA, Besser J, Richardson MK, Spaink HP, Leito JT, Bagowski CP (2005) Gene expression profiling of the long-term adaptive response to hypoxia in the gills of adult zebrafish. Am J Physiol Regul Integr Comp Physiol 289: R1512-R1519.
48. Vlecken DH, Testerink J, Ott EB, Sakalis PA, Jaspers RT, Bagowski CP (2009) A critical role for myoglobin in zebrafish development. Int J Dev Biol 53: 517-524.
49. Weller PA, Price M, Isenberg H, Edwards YH, Jeffreys AJ (1986) Myoglobin expression: early induction and subsequent modulation of myoglobin and myoglobin mRNA during myogenesis. Mol Cell Biol 6: 4539-4547.
50. Wilkins NP (1985) Ontogeny and evolution of salmonid hemoglobins. Int Rev Cytol 94: 269-298.
51. Wittenberg JB, Wittenberg BA (2003) Myoglobin function reassessed. J Exp Biol 206: 2011-2020.