-
2
-
-
0036940303
-
Metal ions in the structure and function of RNA
-
DOI 10.1007/s00775-002-0387-6
-
A.M. Pyle Metal ions in the structure and function of RNA J. Biol. Inorg. Chem. 7 2002 679 690 (Pubitemid 36056354)
-
(2002)
Journal of Biological Inorganic Chemistry
, vol.7
, Issue.7-8
, pp. 679-690
-
-
Pyle, A.M.1
-
3
-
-
0032419499
-
On the role of magnesium ions in RNA stability
-
V.K. Misra, and D.E. Draper On the role of magnesium ions in RNA stability Biopolymers 48 1998 113 135
-
(1998)
Biopolymers
, vol.48
, pp. 113-135
-
-
Misra, V.K.1
Draper, D.E.2
-
4
-
-
0034111513
-
Metal ions in ribozyme folding and catalysis
-
DOI 10.1016/S1367-5931(99)00071-X
-
R. Hanna, and J.A. Doundna Metal ions in ribozyme folding and catalysis Curr. Opin. Chem. Biol. 4 2000 166 170 (Pubitemid 30189307)
-
(2000)
Current Opinion in Chemical Biology
, vol.4
, Issue.2
, pp. 166-170
-
-
Hanna, R.1
Doudna, J.A.2
-
5
-
-
0033199205
-
Magnesium-dependent alternative foldings of active and inactive Escherichia coli tRNA(Glu) revealed by chemical probing
-
DOI 10.1093/nar/27.17.3583
-
E. Madore, C. Florentz, R. Giege, and J. Lapointe Magnesium-dependent alternative foldings of active and inactive Escherichia coli tRNA(Glu) revealed by chemical probing Nucleic Acids Res. 27 1999 3583 3588 (Pubitemid 29414688)
-
(1999)
Nucleic Acids Research
, vol.27
, Issue.17
, pp. 3583-3588
-
-
Madore, E.1
Florentz, C.2
Giege, R.3
Lapointe, J.4
-
6
-
-
0032387836
-
Structure of the potassium form of CGCGAATTCGCG: DNA deformation by electrostatic collapse around inorganic cations
-
DOI 10.1021/bi982063o
-
X. Shui, C.C. Sines, L. McFail-Isom, D. VanDerveer, and L.D. Williams Structure of the potassium form of CGCGAATTCGCG: DNA deformation by electrostatic collapse around inorganic cations Biochemistry 37 1998 16877 16887 (Pubitemid 28566764)
-
(1998)
Biochemistry
, vol.37
, Issue.48
, pp. 16877-16887
-
-
Shui, X.1
Sines, C.C.2
McFail-Isom, L.3
VanDerveer, D.4
Williams, L.D.5
-
7
-
-
0001891352
-
The effect of metal ions on the structure and function of nucleic acids
-
G.L. Eichhorn The effect of metal ions on the structure and function of nucleic acids Adv. Inorg. Biochem. 3 1981 1 46
-
(1981)
Adv. Inorg. Biochem.
, vol.3
, pp. 1-46
-
-
Eichhorn, G.L.1
-
8
-
-
84985666936
-
Cation effects on the denaturation of deoxyribonucleic acid (DNA)
-
W.F. Dove, and N. Davidson Cation effects on the denaturation of deoxyribonucleic acid (DNA) J. Mol. Biol. 5 1962 467 478
-
(1962)
J. Mol. Biol.
, vol.5
, pp. 467-478
-
-
Dove, W.F.1
Davidson, N.2
-
9
-
-
0014422451
-
Interaction of metal ions with polynucleotides and related compounds. XII. The relative effect of various metal ions on DNA helicity
-
G.L. Eichhorn, and Y.A. Shin Interaction of metal ions with polynucleotides and related compounds. XII. The relative effect of various metal ions on DNA helicity J. Am. Chem. Soc. 90 1968 7323 7328
-
(1968)
J. Am. Chem. Soc.
, vol.90
, pp. 7323-7328
-
-
Eichhorn, G.L.1
Shin, Y.A.2
-
10
-
-
0011824888
-
Structures and energies of hydrogen-bonded DNA base pairs. A nonempirical study with inclusion of electron correlation
-
J. Sponer, J. Leszczynski, and P. Hobza Structures and energies of hydrogen-bonded DNA base pairs. A nonempirical study inclusion of electron correlation J. Phys. Chem. 100 1996 1965 1974 (Pubitemid 126790022)
-
(1996)
Journal of Physical Chemistry
, vol.100
, Issue.5
, pp. 1965-1974
-
-
Sponer, J.1
Leszczynski, J.2
Hobza, P.3
-
11
-
-
0031274672
-
2+): Nonempirical ab initio calculations on structures, energies, and nonadditivity of the interaction
-
2+): nonempirical ab initio calculations on structures, energies, and nonadditivity of the interaction J. Phys. Chem. B 101 1997 9670 9677 (Pubitemid 127581284)
-
(1997)
Journal of Physical Chemistry B
, vol.101
, Issue.46
, pp. 9670-9677
-
-
Burda, J.V.1
Sponer, J.2
Leszczynski, J.3
Hobza, P.4
-
13
-
-
0029959473
-
+ binding to the DNA and RNA nucleobases. Bond energies and attachment sites from the dissociation of metal ion-bound heterodimers
-
DOI 10.1021/ja9613421
-
+ binding to the DNA and RNA nucleobases. Bond energies and attachment sites from the dissociation of metal ion-bound heterodimers J. Am. Chem. Soc. 118 1996 11884 11892 (Pubitemid 26417478)
-
(1996)
Journal of the American Chemical Society
, vol.118
, Issue.47
, pp. 11884-11892
-
-
Cerda, B.A.1
Wesdemiotis, C.2
-
17
-
-
0032885499
-
2-)
-
DOI 10.1007/s007750050336
-
C.P. Da Costa, and H. Sigel Stabilities of complexes formed between lead(II) and simple phosphonate or phosphate monoester ligands including some pyrimidine-nucleoside 5′-monophosphates (CMP2-, UMP2-, dTMP2-) J. Biol. Inorg. Chem. 4 1999 508 514 (Pubitemid 29426307)
-
(1999)
Journal of Biological Inorganic Chemistry
, vol.4
, Issue.4
, pp. 508-514
-
-
Da Costa, C.P.1
Sigel, H.2
-
18
-
-
0034716085
-
2-) in aqueous solution. Evidence for nucleobase - lead(II) interactions
-
DOI 10.1021/ic0007207
-
2-) in aqueous solution. Evidence for nucleobase-lead(II) interactions Inorg. Chem. 39 2000 5985 5993 (Pubitemid 32063213)
-
(2000)
Inorganic Chemistry
, vol.39
, Issue.26
, pp. 5985-5993
-
-
Da Costa, C.P.1
Sigel, H.2
-
19
-
-
4243720907
-
Interactions of lead(II) with nucleotides and their constituents
-
DOI 10.1016/S0010-8545(01)00343-5, PII S0010854501003435
-
H. Sigel, C.P. Da Costa, and R.B. Martin Interactions of lead(II) with nucleotides and their constituents Coord. Chem. Rev. 219 2001 435 461 (Pubitemid 32936591)
-
(2001)
Coordination Chemistry Reviews
, vol.219-221
, pp. 435-461
-
-
Sigel, H.1
Da Costa, C.P.2
Martin R.Bruce3
-
20
-
-
18444391258
-
Experimental and computational study of the gas-phase interactions between lead(II) ions and two pyrimidic nucleobases: Uracil and thymine
-
DOI 10.1016/j.ijms.2005.03.011, PII S1387380605001065
-
S. Guillaumont, J. Tortajada, J.Y. Salpin, and A.M. Lamsabhi Experimental and computational study of the gas-phase interactions between lead(II) ions and two pyrimidic nucleobases: uracil and thymine Int. J. Mass Spectrom. 243 2005 279 293 (Pubitemid 40653313)
-
(2005)
International Journal of Mass Spectrometry
, vol.243
, Issue.3
, pp. 279-293
-
-
Guillaumont, S.1
Tortajada, J.2
Salpin, J.-Y.3
Lamsabhi, A.M.4
-
21
-
-
60649116052
-
Gas-phase interactions between lead(II) ions and thiouracil nucleobases: A combined experimental and theoretical study
-
J.Y. Salpin, S. Guillaumont, J. Tortajada, and A.M. Lamsabhi Gas-phase interactions between lead(II) ions and thiouracil nucleobases: a combined experimental and theoretical study J. Am. Soc. Mass Spectrom. 20 2009 359 369
-
(2009)
J. Am. Soc. Mass Spectrom.
, vol.20
, pp. 359-369
-
-
Salpin, J.Y.1
Guillaumont, S.2
Tortajada, J.3
Lamsabhi, A.M.4
-
22
-
-
67650325212
-
Infrared multiple photone diiociation spectroscopy of ions in Penning traps
-
J.R. Eyler Infrared multiple photone diiociation spectroscopy of ions in Penning traps Mass Spectrom. Rev. 28 2009 448 467
-
(2009)
Mass Spectrom. Rev.
, vol.28
, pp. 448-467
-
-
Eyler, J.R.1
-
23
-
-
67650319048
-
Infrared consequence spectroscopy of gaseous protonated and metal ion cationized complexes
-
T.D. Fridgen Infrared consequence spectroscopy of gaseous protonated and metal ion cationized complexes Mass Spectrom. Rev. 28 2009 586 607
-
(2009)
Mass Spectrom. Rev.
, vol.28
, pp. 586-607
-
-
Fridgen, T.D.1
-
24
-
-
66149100895
-
Vibrational spectroscopy of bare and solvated ionic complexes of biological relevance
-
N.C. Polfer, and J. Oomens Vibrational spectroscopy of bare and solvated ionic complexes of biological relevance Mass Spectrom. Rev. 28 2009 468 494
-
(2009)
Mass Spectrom. Rev.
, vol.28
, pp. 468-494
-
-
Polfer, N.C.1
Oomens, J.2
-
25
-
-
70350391851
-
+ and the monosolvated water and methanol solvated species by infrared multiple-photon dissociation spectroscopy, energy-resolved collision-induced dissociation, and electronic structure calculations
-
+ and the monosolvated water and methanol solvated species by infrared multiple-photon dissociation spectroscopy, energy-resolved collision-induced dissociation, and electronic structure calculations J. Phys. Chem. B 113 2009 14457 14464
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 14457-14464
-
-
Atkins, C.G.1
Banu, L.2
Rowsell, M.3
Blagojevic, V.4
Bohme, D.K.5
Fridgen, T.D.6
-
26
-
-
60649117538
-
Solvation of electrosprayed ions in the accumulation/collision hexapole of a hybrid Q-FTMS
-
K. Rajabi, M.L. Easterling, and T.D. Fridgen Solvation of electrosprayed ions in the accumulation/collision hexapole of a hybrid Q-FTMS J. Am. Soc. Mass Spectrom. 20 2009 411 418
-
(2009)
J. Am. Soc. Mass Spectrom.
, vol.20
, pp. 411-418
-
-
Rajabi, K.1
Easterling, M.L.2
Fridgen, T.D.3
-
27
-
-
85017803190
-
-
Gaussian, Inc. Wallingford
-
M.J.T.G.W. Frisch, H.B. Schlegel, G.E. Scuseria, M.A. Robb, J.R. Cheeseman, J.A. Montgomery Jr., T. Vreven, K.N. Kudin, J.C. Burant, J.M. Millam, S.S. Iyengar, J. Tomasi, V. Barone, B. Mennucci, M. Cossi, G. Scalmani, N. Rega, G.A. Petersson, H. Nakatsuji, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J. Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai, M. Klene, X. Li, J.E. Knox, H.P. Hratchian, J.B. Cross, C. Adamo, J. Jaramillo, R. Gomperts, R.E. Stratmann, O. Yazyev, A.J. Austin, R. Cammi, C. Pomelli, J.W. Ochterski, P.Y. Ayala, K. Morokuma, G.A. Voth, P. Salvador, J.J. Dannenberg, V.G. Zakrzewski, S. Dapprich, A.D. Daniels, M.C. Strain, O. Farkas, D.K. Malick, A.D. Rabuck, K. Raghavachari, J.B. Foresman, J.V. Ortiz, Q. Cui, A.G. Baboul, S. Clifford, J. Cioslowski, B.B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R.L. Martin, D.J. Fox, T. Keith, M.A. Al-Laham, C.Y. Peng, A. Nanayakkara, M. Challacombe, P.M.W. Gill, B. Johnson, W. Chen, M.W. Wong, C. Gonzalez, and J.A. Pople Gaussian 09 ed 2008 Gaussian, Inc. Wallingford
-
(2008)
Gaussian 09 Ed
-
-
Frisch, M.J.T.G.W.1
Schlegel, H.B.2
Scuseria, G.E.3
Robb, M.A.4
Cheeseman, J.R.5
Montgomery Jr., J.A.6
Vreven, T.7
Kudin, K.N.8
Burant, J.C.9
Millam, J.M.10
Iyengar, S.S.11
Tomasi, J.12
Barone, V.13
Mennucci, B.14
Cossi, M.15
Scalmani, G.16
Rega, N.17
Petersson, G.A.18
Nakatsuji, H.19
Hada, M.20
Ehara, M.21
Toyota, K.22
Fukuda, R.23
Hasegawa, J.24
Ishida, M.25
Nakajima, T.26
Honda, Y.27
Kitao, O.28
Nakai, H.29
Klene, M.30
Li, X.31
Knox, J.E.32
Hratchian, H.P.33
Cross, J.B.34
Adamo, C.35
Jaramillo, J.36
Gomperts, R.37
Stratmann, R.E.38
Yazyev, O.39
Austin, A.J.40
Cammi, R.41
Pomelli, C.42
Ochterski, J.W.43
Ayala, P.Y.44
Morokuma, K.45
Voth, G.A.46
Salvador, P.47
Dannenberg, J.J.48
Zakrzewski, V.G.49
Dapprich, S.50
Daniels, A.D.51
Strain, M.C.52
Farkas, O.53
Malick, D.K.54
Rabuck, A.D.55
Raghavachari, K.56
Foresman, J.B.57
Ortiz, J.V.58
Cui, Q.59
Baboul, A.G.60
Clifford, S.61
Cioslowski, J.62
Stefanov, B.B.63
Liu, G.64
Liashenko, A.65
Piskorz, P.66
Komaromi, I.67
Martin, R.L.68
Fox, D.J.69
Keith, T.70
Al-Laham, M.A.71
Peng, C.Y.72
Nanayakkara, A.73
Challacombe, M.74
Gill, P.M.W.75
Johnson, B.76
Chen, W.77
Wong, M.W.78
Gonzalez, C.79
Pople, J.A.80
more..
-
28
-
-
0034608909
-
The acidity of uracil from the gas phase to solution: The coalescence of the N1 and N3 sites and implications for biological glycosylation
-
DOI 10.1021/ja000549y
-
M.A. Kurinovich, and J.K. Lee The acidity of uracil from the gas phase to solution: the coalescence of the N1 and N3 sites and implications for biological glycosylation J. Am. Chem. Soc. 122 2000 6258 6262 (Pubitemid 30456858)
-
(2000)
Journal of the American Chemical Society
, vol.122
, Issue.26
, pp. 6258-6262
-
-
Kurinovich, M.A.1
Lee, J.K.2
-
30
-
-
0001394051
-
Protonation and deprotonation enthalpies of guanine and adenine and implications for the structure and energy of their complexes with water: Comparison with uracil, thymine, and cytosine
-
A.K. Chandra, M.T. Nguyen, T. Uchimaru, and T. Zeegers-Huyskens Protonation and deprotonation enthalpies of guanine and adenine and implications for the structure and energy of their complexes with water: comparison with uracil, thymine, and cytosine J. Phys. Chem. A 103 1999 8853 8860 (Pubitemid 129569871)
-
(1999)
Journal of Physical Chemistry A
, vol.103
, Issue.44
, pp. 8853-8860
-
-
Chandra, A.K.1
Nguyen, M.T.2
Uchimaru, T.3
Zeegers-Huyskens, T.4
-
32
-
-
0037561551
-
Theoretical estimations of the 298 K gas-phase acidities of the pyrimidine-based nucleobases uracil, thymine, and cytosine
-
Y.Q. Huang, and H. Kenttamaa Theoretical estimations of the 298 K gas-phase acidities of the pyrimidine-based nucleobases uracil, thymine, and cytosine J. Phys. Chem. A 107 2003 4893 4897
-
(2003)
J. Phys. Chem. A
, vol.107
, pp. 4893-4897
-
-
Huang, Y.Q.1
Kenttamaa, H.2
-
33
-
-
0036674440
-
The acidity of uracil and uracil analogs in the gas phase: Four surprisingly acidic sites and biological implications
-
DOI 10.1016/S1044-0305(02)00410-5, PII S1044030502004105
-
M.A. Kurinovich, and J.K. Lee The acidity of uracil and uracil analogs in the gas phase: four surprisingly acidic sites and biological implications J. Am. Soc. Mass Spectrom. 13 2002 985 995 (Pubitemid 36876011)
-
(2002)
Journal of the American Society for Mass Spectrometry
, vol.13
, Issue.8
, pp. 985-995
-
-
Kurinovich, M.A.1
Lee, J.K.2
-
34
-
-
84951883303
-
Tables of molecular vibrational frequencies consolidated
-
T. Shimanouchi Tables of molecular vibrational frequencies consolidated Nat. Bur. Stand. 1 1972 1 164
-
(1972)
Nat. Bur. Stand.
, vol.1
, pp. 1-164
-
-
Shimanouchi, T.1
-
35
-
-
61749097562
-
+-uracil complexes by IRMPD spectroscopy in the N-H/O-H stretching region
-
+-uracil complexes by IRMPD spectroscopy in the N-H/O-H stretching region J. Phys. Chem. A 113 2009 824 832
-
(2009)
J. Phys. Chem. A
, vol.113
, pp. 824-832
-
-
Gillis, E.A.L.1
Rajabi, K.2
Fridgen, T.D.3
-
36
-
-
78049279272
-
+-adenine-thymine complex by IRMPD spectroscopy in the N-H/O-H strtching region
-
+-adenine- thymine complex by IRMPD spectroscopy in the N-H/O-H strtching region Int. J. Mass Spectrom. 297 2010 2 8
-
(2010)
Int. J. Mass Spectrom.
, vol.297
, pp. 2-8
-
-
Gillis, E.A.L.1
Fridgen, T.D.2
-
37
-
-
77949455355
-
Structures of alkali metal ion-adenine complexes and hydrated complexes by IRMPD spectroscopy and electronic structure calculations
-
K. Rajabi, E.A.L. Gillis, and T.D. Fridgen Structures of alkali metal ion-adenine complexes and hydrated complexes by IRMPD spectroscopy and electronic structure calculations J. Phys. Chem. A 114 2010 3449 3456
-
(2010)
J. Phys. Chem. A
, vol.114
, pp. 3449-3456
-
-
Rajabi, K.1
Gillis, E.A.L.2
Fridgen, T.D.3
-
38
-
-
35648978904
-
Hydration of the calcium dication: Direct evidence for second shell formation from infrared spectroscopy
-
M.F. Bush, R.J. Saykally, and E.R. Williams Hydration of the calcium dication: direct evidence for second shell formation from infrared spectroscopy Chem. Phys. Chem. 8 2007 2245 2253
-
(2007)
Chem. Phys. Chem.
, vol.8
, pp. 2245-2253
-
-
Bush, M.F.1
Saykally, R.J.2
Williams, E.R.3
|