-
2
-
-
26944481188
-
Interfaces and the driving force of hydrophobic assembly
-
DOI 10.1038/nature04162, PII N04162
-
D. Chandler, Nature (London) 437, 640 (2005), and references therein. 10.1038/nature04162 (Pubitemid 41486526)
-
(2005)
Nature
, vol.437
, Issue.7059
, pp. 640-647
-
-
Chandler, D.1
-
4
-
-
0030912208
-
-
references therein. 10.1002/pro.5560060627
-
C. Tanford, Protein Sci. 6, 1358 (1997), and references therein. 10.1002/pro.5560060627
-
(1997)
Protein Sci.
, vol.6
, pp. 1358
-
-
Tanford, C.1
-
5
-
-
33646904758
-
Protein folding-simulation
-
DOI 10.1021/cr0404242
-
V. Daggett, Chem. Rev. 106, 1898 (2006), and references therein. 10.1021/cr0404242 (Pubitemid 43792785)
-
(2006)
Chemical Reviews
, vol.106
, Issue.5
, pp. 1898-1916
-
-
Daggett, V.1
-
7
-
-
23244452958
-
Effect of urea on peptide conformation in water: Molecular dynamics and experimental characterization
-
DOI 10.1529/biophysj.105.061978
-
A. Caballero-Herrera, K. Nordstrand, K. D. Berndt, and L. Nilsson, Biophys. J. 89, 842 (2005). 10.1529/biophysj.105.061978 (Pubitemid 41098971)
-
(2005)
Biophysical Journal
, vol.89
, Issue.2
, pp. 842-857
-
-
Caballero-Herrera, A.1
Nordstrand, K.2
Berndt, K.D.3
Nilsson, L.4
-
8
-
-
0037442337
-
Molecular dynamics simulations of end-to-end contact formation in hydrocarbon chains in water and aqueous urea solution
-
DOI 10.1021/ja020496f
-
R. D. Mountain and D. Thirumalai, J. Am. Chem. Soc. 125, 1950 (2003). 10.1021/ja020496f (Pubitemid 36232587)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.7
, pp. 1950-1957
-
-
Mountain, R.D.1
Thirumalai, D.2
-
10
-
-
46449109015
-
-
10.1146/annurev.biochem.77.061306.131357
-
D. W. Bolen and G. D. Rose, Annu. Rev. Biochem. 77, 339 (2008). 10.1146/annurev.biochem.77.061306.131357
-
(2008)
Annu. Rev. Biochem.
, vol.77
, pp. 339
-
-
Bolen, D.W.1
Rose, G.D.2
-
13
-
-
20444474170
-
A natural osmolyte trimethylamine N-oxide promotes assembly and bundling of the bacterial cell division protein, FtsZ and counteracts the denaturing effects of urea
-
DOI 10.1111/j.1742-4658.2005.04696.x
-
A. Mukherjee, M. K. Santra, T. K. Beuria, and D. Panda, FEBS J. 272, 2760 (2005). 10.1111/j.1742-4658.2005.04696.x (Pubitemid 40825423)
-
(2005)
FEBS Journal
, vol.272
, Issue.11
, pp. 2760-2772
-
-
Mukherjee, A.1
Santra, M.K.2
Beuria, T.K.3
Panda, D.4
-
14
-
-
33947488954
-
-
10.1021/ja01064a028
-
C. Tanford, J. Am. Chem. Soc. 86, 2050 (1964). 10.1021/ja01064a028
-
(1964)
J. Am. Chem. Soc.
, vol.86
, pp. 2050
-
-
Tanford, C.1
-
16
-
-
0030762556
-
A naturally occurring protective system in urea-rich cells: Mechanism of osmolyte protection of proteins against urea denaturation
-
DOI 10.1021/bi970247h
-
A. Wang, and D. W. Bolen, Biochemistry 36, 9101 (1997). 10.1021/bi970247h (Pubitemid 27329494)
-
(1997)
Biochemistry
, vol.36
, Issue.30
, pp. 9101-9108
-
-
Wang, A.1
Bolen, D.W.2
-
17
-
-
0028862864
-
-
10.1021/bi00039a051
-
Y. Liu, and D. W. Bolen, Biochemistry 34, 12884 (1995). 10.1021/bi00039a051
-
(1995)
Biochemistry
, vol.34
, pp. 12884
-
-
Liu, Y.1
Bolen, D.W.2
-
18
-
-
0032570873
-
Forcing thermodynamically unfolded proteins to fold
-
DOI 10.1074/jbc.273.9.4831
-
I. Baskakov, and D. W. Bolen, J. Biol. Chem. 273, 4831 (1998). 10.1074/jbc.273.9.4831 (Pubitemid 28108630)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.9
, pp. 4831-4834
-
-
Baskakov, I.1
Bolen, D.W.2
-
19
-
-
0035958656
-
The osmophobic effect: Natural selection of a thermodynamic force in protein folding
-
DOI 10.1006/jmbi.2001.4819
-
D. W. Bolen, and I. Baskakov, J. Mol. Biol. 310, 955 (2001). 10.1006/jmbi.2001.4819 (Pubitemid 32738368)
-
(2001)
Journal of Molecular Biology
, vol.310
, Issue.5
, pp. 955-963
-
-
Bolen, D.W.1
Baskakov, I.V.2
-
21
-
-
0035977650
-
Molecular dynamics study on hydrophobic effects in aqueous urea solutions
-
DOI 10.1021/ja002064f
-
M. Ikeguchi, S. Nakamura, and K. Shimizu, J. Am. Chem. Soc. 123, 677 (2001). 10.1021/ja002064f (Pubitemid 32106007)
-
(2001)
Journal of the American Chemical Society
, vol.123
, Issue.4
, pp. 677-682
-
-
Ikeguchi, M.1
Nakamura, S.2
Shimizu, K.3
-
22
-
-
0032554078
-
Hydrophobic interactions in aqueous urea solutions with implications for the mechanism of protein denaturation
-
DOI 10.1021/ja972053v
-
A. Wallqvist, D. G. Covell, and D. Thirumalai, J. Am. Chem. Soc. 120, 427 (1998). 10.1021/ja972053v (Pubitemid 28062530)
-
(1998)
Journal of the American Chemical Society
, vol.120
, Issue.2
, pp. 427-428
-
-
Wallqvist, A.1
Covell, D.G.2
Thirumalai, D.3
-
27
-
-
23244459863
-
Osmolyte trimethylamine-N-oxide does not affect the strength of hydrophobic interactions: Origin of osmolyte compatibility
-
DOI 10.1529/biophysj.104.056671
-
M. V. Athawale, J. S. Dordick, and S. Garde, Biophys. J. 89, 858 (2005). 10.1529/biophysj.104.056671 (Pubitemid 41098972)
-
(2005)
Biophysical Journal
, vol.89
, Issue.2
, pp. 858-866
-
-
Athawale, M.V.1
Dordick, J.S.2
Garde, S.3
-
28
-
-
34547534081
-
The influence of urea and trimethylamine-N-oxide on hydrophobic interactions
-
DOI 10.1021/jp0733668
-
S. Paul and G. N. Patey, J. Phys. Chem. B 111, 7932 (2007). 10.1021/jp0733668 (Pubitemid 47184362)
-
(2007)
Journal of Physical Chemistry B
, vol.111
, Issue.28
, pp. 7932-7933
-
-
Paul, S.1
Patey, G.N.2
-
29
-
-
34247121912
-
Structure and interaction in aqueous urea - Trimethylamine-N-oxide solutions
-
DOI 10.1021/ja0685506
-
S. Paul and G. N. Patey, J. Am. Chem. Soc. 129, 4476 (2007). 10.1021/ja0685506 (Pubitemid 46595464)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.14
, pp. 4476-4482
-
-
Paul, S.1
Patey, G.N.2
-
34
-
-
22144481993
-
Hydrophobic hydration from small to large lengthscales: Understanding and manipulating the crossover
-
DOI 10.1073/pnas.0504089102
-
S. Rajamani, T. M. Truskett, and S. Garde, Proc. Natl. Acad. Sci. U.S.A. 102, 9475 (2005). 10.1073/pnas.0504089102 (Pubitemid 40981706)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.27
, pp. 9475-9480
-
-
Rajamani, S.1
Truskett, T.M.2
Garde, S.3
-
35
-
-
33846512404
-
Effects of lengthscales and attractions on the collapse of hydrophobic polymers in water
-
DOI 10.1073/pnas.0605139104
-
M. V. Athawale, G. Goel, T. Gosh, T. M. Truskett, and S. Garde, Proc. Natl. Acad. Sci. U.S.A. 104, 733 (2007). 10.1073/pnas.0605139104 (Pubitemid 46154679)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.3
, pp. 733-738
-
-
Athawale, M.V.1
Goel, G.2
Ghosh, T.3
Truskett, T.M.4
Garde, S.5
-
38
-
-
0038717923
-
-
10.1021/jp027336a
-
K. M. Kast, J. Brickmann, S. M. Kast, and R. S. Berry, J. Phys. Chem. A 107, 5342 (2003). 10.1021/jp027336a
-
(2003)
J. Phys. Chem. A
, vol.107
, pp. 5342
-
-
Kast, K.M.1
Brickmann, J.2
Kast, S.M.3
Berry, R.S.4
-
42
-
-
0035823844
-
Molecular dynamics simulations of pressure effects on hydrophobic interactions
-
DOI 10.1021/ja010446v
-
T. Ghosh, A. E. Garca, and S. Garde, J. Am. Chem. Soc. 123, 10997 (2001). 10.1021/ja010446v (Pubitemid 33042014)
-
(2001)
Journal of the American Chemical Society
, vol.123
, Issue.44
, pp. 10997-11003
-
-
Ghosh, T.1
Garcia, A.E.2
Garde, S.3
-
45
-
-
34249806047
-
Preferential solvation in urea solutions at different concentrations: Properties from simulation studies
-
DOI 10.1021/jp067659x
-
H. Kokubo and B. M. Pettitt, J. Phys. Chem. B 111, 5233 (2007). 10.1021/jp067659x (Pubitemid 46854511)
-
(2007)
Journal of Physical Chemistry B
, vol.111
, Issue.19
, pp. 5233-5242
-
-
Kokubo, H.1
Pettitt, B.M.2
-
46
-
-
0013096029
-
-
10.1021/j100346a086
-
A. Ben-Naim, J. Phys. Chem. 93, 3809 (1989). 10.1021/j100346a086
-
(1989)
J. Phys. Chem.
, vol.93
, pp. 3809
-
-
Ben-Naim, A.1
-
47
-
-
41649121838
-
-
10.1016/j.chemphys.2007.07.052
-
S. E. Pagnotta, M. A. Ricci, F. Bruni, S. McLain, and S. Magazu, Chem. Phys. 345, 159 (2008). 10.1016/j.chemphys.2007.07.052
-
(2008)
Chem. Phys.
, vol.345
, pp. 159
-
-
Pagnotta, S.E.1
Ricci, M.A.2
Bruni, F.3
McLain, S.4
Magazu, S.5
-
48
-
-
33748607207
-
-
10.1039/a608381a
-
R. L. Mancera, A. D. Buckingham, and N. T. Skipper, J. Chem. Soc., Faraday Trans. 93 (13), 2263 (1997). 10.1039/a608381a
-
(1997)
J. Chem. Soc., Faraday Trans.
, vol.93
, Issue.13
, pp. 2263
-
-
Mancera, R.L.1
Buckingham, A.D.2
Skipper, N.T.3
-
53
-
-
0141560450
-
Impact of urea on water structure: A clue to its properties as a denaturant?
-
DOI 10.1016/S0301-4622(03)00095-4
-
A. K. Soper, E. W. Castner, and A. Luzar, Biophys. Chem. 105, 649 (2003). 10.1016/S0301-4622(03)00095-4 (Pubitemid 37123089)
-
(2003)
Biophysical Chemistry
, vol.105
, Issue.2-3
, pp. 649-666
-
-
Soper, A.K.1
Castner, E.W.2
Luzar, A.3
-
54
-
-
72249104136
-
-
10.1016/j.bpj.2009.08.017
-
F. Meersman, D. Bowron, A. K. Soper, and M. H. J. Koch, Biophys. J. 97, 2559 (2009). 10.1016/j.bpj.2009.08.017
-
(2009)
Biophys. J.
, vol.97
, pp. 2559
-
-
Meersman, F.1
Bowron, D.2
Soper, A.K.3
Koch, M.H.J.4
-
55
-
-
27644444686
-
Liquid-vapor interfaces of water-acetonitrile mixtures of varying composition
-
DOI 10.1063/1.2102892, 184706
-
S. Paul and A. Chandra, J. Chem. Phys. 123, 184706 (2005). 10.1063/1.2102892 (Pubitemid 41580123)
-
(2005)
Journal of Chemical Physics
, vol.123
, Issue.18
, pp. 1-8
-
-
Paul, S.1
Chandra, A.2
-
60
-
-
0034504583
-
Resolving the hydrogen bond dynamics conundrum
-
DOI 10.1063/1.1320826
-
A. Luzar, J. Chem. Phys. 113, 10663 (2000). 10.1063/1.1320826 (Pubitemid 32076963)
-
(2000)
Journal of Chemical Physics
, vol.113
, Issue.23
, pp. 10663-10675
-
-
Luzar, A.1
-
61
-
-
4243838224
-
-
10.1103/PhysRevLett.85.768
-
A. Chandra, Phys. Rev. Lett. 85, 768 (2000); 10.1103/PhysRevLett.85.768
-
(2000)
Phys. Rev. Lett.
, vol.85
, pp. 768
-
-
Chandra, A.1
-
62
-
-
0038270185
-
-
10.1021/jp022147d
-
A. Chandra, J. Phys. Chem. B 107, 3899 (2003). 10.1021/jp022147d
-
(2003)
J. Phys. Chem. B
, vol.107
, pp. 3899
-
-
Chandra, A.1
-
64
-
-
1442312012
-
-
10.1016/j.cplett.2003.12.120
-
S. Paul and A. Chandra, Chem. Phys. Lett. 386, 218 (2004); 10.1016/j.cplett.2003.12.120
-
(2004)
Chem. Phys. Lett.
, vol.386
, pp. 218
-
-
Paul, S.1
Chandra, A.2
-
66
-
-
0000866097
-
-
10.1080/00268978300102931
-
D. Rapaport, Mol. Phys. 50, 1151 (1983). 10.1080/00268978300102931
-
(1983)
Mol. Phys.
, vol.50
, pp. 1151
-
-
Rapaport, D.1
|