Identification of proteins interacting with lactate dehydrogenase in claw muscle of the porcelain crab Petrolisthes cinctipes

Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics

Volumn 6, Issue 4, 2011, Pages 393-398

  Cayenne, Andrea P ^a   Gabert, Beverly ^b   Stillman, Jonathon H ^a,c  

^a SAN FRANCISCO STATE UNIVERSITY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Glycolysis; Lactate dehydrogenase; Metabolon; Protein protein interactions; Stability

Indexed keywords

CYTOSKELETON PROTEIN; GLYCOLYTIC ENZYME; HEMOCYANIN; LACTATE DEHYDROGENASE; MUSCLE PROTEIN;

ARTICLE; CRAB; ELECTROSPRAY MASS SPECTROMETRY; ENZYME ANALYSIS; GEL PERMEATION CHROMATOGRAPHY; LIQUID CHROMATOGRAPHY; MUSCLE TISSUE; NONHUMAN; PETROLISTHES CINCTIPES; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN PROTEIN INTERACTION; TANDEM MASS SPECTROMETRY; WESTERN BLOTTING;

PETROLISTHES; PETROLISTHES CINCTIPES; PORCELLANIDAE;

EID: 80755153605     PISSN: 1744117X     EISSN: 18780407     Source Type: Journal    
DOI: 10.1016/j.cbd.2011.09.002     Document Type: Article

References (33)

1. W. Becktel, and W. Baase Thermal denaturation of bacteriophage T4 lysozyme at neutral pH Biopolymers 26 1987 619 623
2. S. Beeckmans, E. Van Driessche, and L. Kanarek Immobilized enzymes as tools for the demonstration of metabolon formation. A short overview J. Mol. Recogn. 6 1993 195 204
3. C. Branden, and J. Tooze Introduction to Protein Structure 2 ed. 1999 Garland Publishing, Inc. New York
4. M.E. Campanella, H. Chu, N.J. Wandersee, L.L. Peters, N. Mohandas, D.M. Gilligan, and P.S. Low Characterization of glycolytic enzyme interactions with murine erythrocyte membranes in wild-type and membrane protein knockout mice Blood 112 2008 3900 3906
5. N. Coquelle, E. Fioravanti, M. Weik, F. Vellieux, and D. Madern Activity, stability and structural studies of lactate dehydrogenases adapted to extreme thermal environments J. Mol. Biol. 374 2007 547 562 (Pubitemid 350007659)
6. M. Deslauiers, D. ni Eidhin, L. Lamonde, and C. Mouton SDS-PAGE analysis of protein and lipopolysaccharide of extracellular vesicules and sarkosyl-insoluble membranes from bacteroides gingivalis Oral Microbiol. Immunol. 5 1990 1 7
7. P. Fields, and G.N. Somero Amino acid sequence differences cannot fully explain interspecific variation in thermal sensitivities of gobiid fish A4-lactate dehydrogenases (A4-LDHs) J. Exp. Biol. 200 1997 1839 1850 (Pubitemid 27288851)
8. P.A. Fields, B.D. Wahlstrand, and G.N. Somero Intrinsic versus extrinsic stabilization of enzymes: the interaction of solutes and temperature on A4-lactate dehydrogenase orthologs from warm-adapted and cold-adapted marine fishes Eur. J. Biochem. 268 2001 4497 4505 (Pubitemid 32862859)
9. P.A. Fields, Y.-S. Kim, J.F. Carpenter, and G.N. Somero Temperature adaptation in Gillichthys (Teleost: Gobiidae) A4-lactate dehydrogenases: identical primary structures produce subtly different conformations J. Exp. Biol. 205 2002 1293 1303 (Pubitemid 34853765)
10. P.S. Freemont, B. Dunbar, and L.A. Fothergill-Gilmore The complete amino acid sequence of human skeletal-muscle fructose-bisphosphate aldolase Biochem. J. 249 1988 779 788 (Pubitemid 18042797)
11. L. Glass-Marmor, and R. Beitner Detachment of glycolytic enzymes from cytoskeleton of melanoma cells induced by calmodulin antagonists Eur. J. Pharmacol. 328 1997 241 248 (Pubitemid 27263363)
12. R. Goetz, E. Schlueter, G. Shoham, and F.K. Zimmermann A potential role of the cytoskeleton of Saccharomyces cerevisiae in a functional organization of glycolytic enzymes Yeast 15 1999 1619 1629 (Pubitemid 29537390)
13. P.W. Hochachka, and G.N. Somero Biochemical adaptation: mechanism and process in physiological evolution 2002 Oxford University Press New York
14. A.J. Kee, P.W. Gunning, and E.C. Hardeman A cytoskeletal tropomyosin can compromise the structural integrity of skeletal muscle Cell Motil. Cytoskel. 66 2009 710 720
15. H. Knull, and A.P. Minton Structure within eukaryotic cytoplasm and its relationship to glycolytic metabolism Cell Biochem. Funct. 14 1996 237 248 (Pubitemid 26402151)
16. W. Kowalski, A. Gizak, and D. Rakus Phosphoglycerate mutase in mammalian striated muscles: subcellular localization and binding partners FEBS Lett. 583 2009 1841 1845
17. U.K. Laemmli Cleavage of structural proteins during assembly of head of bacteriophage-T4 Nature 227 1970 680 685
18. C.J. Layton, and H.W. Hellinga Quantitation of protein-protein interactions by thermal stability shift analysis Protein Sci. 20 2011 1439 1450 10.1002/pro.674
19. C. Masters Microenvironmental factors and the binding of glycolytic enzymes to contractile filaments Int. J. Biochem. 24 1992 405 410
20. S.P. Mathupala, C. Heese, and P.L. Pedersen Glucose catabolism in cancer cells. The type II hexokinase promoter contains functionally active response elements for the tumor suppressor p53 J. Biol. Chem. 272 1997 22776 22780 (Pubitemid 27386097)
21. M. Peshavaria Molecular structure of the human muscle-specific enolase gene (ENO3) Biochem. J. 275 1991 427 433
22. B. Phee, D.H. Shin, J. Cho, S. Kim, J. Kim, Y. Lee, J. Jeon, S.H. Bhoo, and T. Hahn Identification of phytochrome-interacting protein candidates in arabidopsis thaliana by co-immunoprecipitation coupled with MALDI-TOF MS Proteomics 6 2006 3671 3680 (Pubitemid 44000194)
23. B.J. Robinson, L. Inman, B. Sumegi, and P.A. Srere Further Characterization of the Krebs tricarboxylic acid cycle metabolon J. Biol. Chem. 262 1986 1786 1790
24. A.L. Samerotte, J.C. Drazen, G.L. Brand, B.A. Seibel, and P.H. Yancey Correlation of trimethylamine oxide and habitat depth within and among species of teleost fish: an analysis of causation Physiol. Biochem. Zool. 80 2007 197 208
25. J.H. Stillman, and G.N. Somero A comparative analysis of the evolutionary patterning and mechanistic bases of lactate dehydrogenase thermal stability in porcelain crabs, genus Petrolisthes J. Exp. Biol. 204 2001 767 776 (Pubitemid 34861177)
26. Tagmount, A., Wang, M., Lindquist, E., Tanaka, Y., Teranishi, K.S., Wong, M., Sunagawa, S., Stillman, J.H., 2010. The porcelain crab transcriptome and PCAD, the porcelain crab microarray and sequence database. PLoS ONE 5(2): e9327.
27. C. Velot, B.M. Mixon, M. Teige, and P.A. Srere Model of a quinary structure between Krebs TCA cycle enzymes: a model for the metabolon Biochemistry 36 1997 14271 14276 (Pubitemid 27509918)
28. V.F. Waingeh, C.D. Gustafson, E.I. Kozliak, S.L. Lowe, H.R. Knull, and K.A. Thomasson Glycolytic enzyme interactions with yeast and skeletal muscle F-actin Biophys. J. 90 2006 1371 1384
29. D.H. Wissemann, I. Anundi, W. Lauchart, R. Viebahn, and H. De Groot Differences in glycolytic capacity and hypoxia tolerance between hepatoma cells and hepatocytes Hepatology 13 1991 297 303
30. P.H. Yancey Water stress, osmolytes and proteins Am. Zool. 41 2001 699 709 (Pubitemid 33770242)
31. P.H. Yancey Organic osmolytes as compatible, metabolic and counteracting cytoprotectants in high osmolarity and other stresses J. Exp. Biol. 208 2005 2819 2830 (Pubitemid 41265173)
32. P.H. Yancey, M.D. Rhea, K.M. Kemp, and D.M. Bailey Trimethylamine oxide, betaine and other osmolytes in deep-sea animals: depth trends and effects on enzymes under hydrostatic pressure Cell. Mol. Biol. 50 2004 371 376
33. H. Zhong, and A. De Marzo Overexpression of hypoxia-inducible factor 1 alpha in commonhuman cancers and their metastases Cancer Res. 59 1999 5830 5835