-
1
-
-
0003392343
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
Carey, M. E., and Smale, S. (1999) Transcriptional Regulation in Eukaryotes: Concepts, Strategies, and Techniques., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
-
(1999)
Transcriptional Regulation in Eukaryotes: Concepts, Strategies, and Techniques
-
-
Carey, M.E.1
Smale, S.2
-
2
-
-
77950566643
-
Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species
-
Bradley, R. K., Li, X. Y., Trapnell, C., Davidson, S., Pachter, L., Chu, H. C., Tonkin, L. A., Biggin, M. D., and Eisen, M. B. (2010) Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species, PLoS biology 8, e1000343.
-
(2010)
PLoS Biology
, vol.8
-
-
Bradley, R.K.1
Li, X.Y.2
Trapnell, C.3
Davidson, S.4
Pachter, L.5
Chu, H.C.6
Tonkin, L.A.7
Biggin, M.D.8
Eisen, M.B.9
-
3
-
-
68849103482
-
Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions
-
MacArthur, S., Li, X. Y., Li, J., Brown, J. B., Chu, H. C., Zeng, L., Grondona, B. P., Hechmer, A., Simirenko, L., Keranen, S. V., Knowles, D. W., Stapleton, M., Bickel, P., Biggin, M. D., and Eisen, M. B. (2009) Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions, Genome biology 10, R80.
-
(2009)
Genome Biology
, vol.10
-
-
MacArthur, S.1
Li, X.Y.2
Li, J.3
Brown, J.B.4
Chu, H.C.5
Zeng, L.6
Grondona, B.P.7
Hechmer, A.8
Simirenko, L.9
Keranen, S.V.10
Knowles, D.W.11
Stapleton, M.12
Bickel, P.13
Biggin, M.D.14
Eisen, M.B.15
-
4
-
-
60149091656
-
ChIP-seq accurately predicts tissue-specific activity of enhancers
-
Visel, A., Blow, M. J., Li, Z., Zhang T., Akiyama, J. A., Holt, A., Plajzer-Frick, I., Shoukry, M., Wright, C., Chen, F., Afzal, V., Ren, B., Rubin, E. M., and Pennacchio, L. A. (2009) ChIP-seq accurately predicts tissue-specific activity of enhancers, Nature 457, 854-858.
-
(2009)
Nature
, vol.457
, pp. 854-858
-
-
Visel, A.1
Blow, M.J.2
Li, Z.3
Zhang, T.4
Akiyama, J.A.5
Holt, A.6
Plajzer-Frick, I.7
Shoukry, M.8
Wright, C.9
Chen, F.10
Afzal, V.11
Ren, B.12
Rubin, E.M.13
Pennacchio, L.A.14
-
5
-
-
77951939743
-
MyoD, a lesson in widespread DNA binding
-
Biggin, M. D. (2010) MyoD, a lesson in widespread DNA binding, Dev Cell. 18, 505-506.
-
(2010)
Dev Cell
, vol.18
, pp. 505-506
-
-
Biggin, M.D.1
-
6
-
-
12744263842
-
Computational identification of developmental enhancers: Conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura
-
Berman, B. P., Pfeiffer, B. D., Laverty, T. R., Salzberg, S. L., Rubin, G. M., Eisen, M. B., and Celniker, S. E. (2004) Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura, Genome biology 5, R61.
-
(2004)
Genome Biology
, vol.5
-
-
Berman, B.P.1
Pfeiffer, B.D.2
Laverty, T.R.3
Salzberg, S.L.4
Rubin, G.M.5
Eisen, M.B.6
Celniker, S.E.7
-
7
-
-
0029031094
-
Oligonucleotides as research, diagnostic and therapeutic agents
-
Gold, L. (1995) Oligonucleotides as research, diagnostic and therapeutic agents, J. Biol. Chem. 270, 13581-13584.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 13581-13584
-
-
Gold, L.1
-
8
-
-
0036022523
-
High-throughput SELEX-SAGE method for quantitative modeling of transcription-factor binding sites
-
DOI 10.1038/nbt718
-
Roulet, E., Busso, S., Camargo, A. A., Simpson, A. J., Mermod, N., and Bucher, P. (2002) High-throughput SELEX SAGE method for quantitative modeling of transcriptionfactor binding sites, Nat Biotechnol 20, 831-835. (Pubitemid 34836762)
-
(2002)
Nature Biotechnology
, vol.20
, Issue.8
, pp. 831-835
-
-
Roulet, E.1
Busso, S.2
Camargo, A.A.3
Simpson, A.J.G.4
Mermod, N.5
Bucher, P.6
-
9
-
-
0037255597
-
Overview of tag protein fusions: From molecular and biochemical fundamentals to commercial systems
-
Terpe, K. (2003) Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems, Applied Microbiol and Biotech 60, 523-533. (Pubitemid 36169526)
-
(2003)
Applied Microbiology and Biotechnology
, vol.60
, Issue.5
, pp. 523-533
-
-
Terpe, K.1
-
10
-
-
0004136246
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
-
Sambrook, J., and Russell, D. W. (2001) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York.
-
(2001)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Russell, D.W.2
-
11
-
-
67849122320
-
MEME SUITE: Tools for motif discovery and searching
-
Bailey, T. L., Boden, M., Buske, F. A., Frith, M., Grant, C. E., Clementi, L., Ren, J., Li, W. W., and Noble, W. S. (2009) MEME SUITE: tools for motif discovery and searching, Nucleic acids research 37, W202-208.
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Bailey, T.L.1
Boden, M.2
Buske, F.A.3
Frith, M.4
Grant, C.E.5
Clementi, L.6
Ren, J.7
Li, W.W.8
Noble, W.S.9
-
12
-
-
33747823564
-
MEME: Discovering and analyzing DNA and protein sequence motifs
-
Bailey, T. L., Williams, N., Misleh, C., and Li, W. W. (2006) MEME: discovering and analyzing DNA and protein sequence motifs, Nucleic Acids Res. 34, 369-373.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 369-373
-
-
Bailey, T.L.1
Williams, N.2
Misleh, C.3
Li, W.W.4
-
13
-
-
0037109192
-
Additivity in protein-DNA interactions: How good an approximation is it?
-
Benos, P. V., Bulyk, M. L., and Stormo, G. D. (2002) Additivity in protein-DNA interactions: how good an approximation is it? Nucleic Acids Res. 30, 4442-4451. (Pubitemid 35277255)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.20
, pp. 4442-4451
-
-
Benos, P.V.1
Bulyk, M.L.2
Stormo, G.D.3
-
14
-
-
58949087398
-
Design, synthesis, and amplification of DNA pools for construction of combinatorial pools and libraries
-
John Wiley & Sons, inc
-
Pollard, J., Bell, S. D., and Ellington, A. D. (2000) Design, Synthesis, and Amplification of DNA Pools for Construction of Combinatorial Pools and Libraries, In Curr. Protoc. Mol. Biol, pp 24.22.21-24.22.24., John Wiley & Sons, inc.
-
(2000)
Curr. Protoc. Mol. Biol
, pp. 242221-242224
-
-
Pollard, J.1
Bell, S.D.2
Ellington, A.D.3
|