High-throughput SELEX-SAGE method for quantitative modeling of transcription-factor binding sites

Nature Biotechnology

Volumn 20, Issue 8, 2002, Pages 831-835

  Roulet, Emmanuelle ^a   Busso, Stéphane ^a   Camargo, Anamaria A ^b   Simpson, Andrew J G ^b   Mermod, Nicolas ^a   Bucher, Philipp ^c  

^a UNIVERSITY OF LAUSANNE   (Switzerland)

^b LUDWIG INSTITUTE FOR CANCER RESEARCH   (Brazil)

^c SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; BIOCHEMISTRY; COMPUTER SIMULATION; DNA; GENES;

BINDING SITES;

BIOTECHNOLOGY;

TRANSCRIPTION FACTOR; CCAAT ENHANCER BINDING PROTEIN; CTF 1 TRANSCRIPTION FACTOR; CTF-1 TRANSCRIPTION FACTOR; DNA; DNA BINDING PROTEIN; LIGAND; NUCLEAR FACTOR I;

ACCURACY; ALGORITHM; ANALYTIC METHOD; ARTICLE; BINDING SITE; BIOINFORMATICS; COMPUTER SIMULATION; COVARIANCE; DNA BINDING; GENE CONTROL; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; RELIABILITY; BIOLOGICAL MODEL; BIOLOGY; CONSENSUS SEQUENCE; DNA RESPONSIVE ELEMENT; ENZYME SPECIFICITY; GENE EXPRESSION REGULATION; GENETICS; GENOME; GENOMICS; METABOLISM; METHODOLOGY; NUCLEOTIDE SEQUENCE; PROTEIN BINDING;

BASE SEQUENCE; BINDING SITES; CCAAT-ENHANCER-BINDING PROTEINS; COMPUTATIONAL BIOLOGY; COMPUTER SIMULATION; CONSENSUS SEQUENCE; DNA; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION; GENOME; GENOMICS; LIGANDS; MODELS, BIOLOGICAL; PROTEIN BINDING; RESPONSE ELEMENTS; SUBSTRATE SPECIFICITY; SUPPORT, NON-U.S. GOV'T; TRANSCRIPTION FACTORS; NFI TRANSCRIPTION FACTORS;

EID: 0036022523     PISSN: 10870156     EISSN: None     Source Type: Journal    
DOI: 10.1038/nbt718     Document Type: Article

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