-
1
-
-
80055108199
-
Novel intron phylogeny supports plumage convergence
-
Allen E.A., Omland K.E. Novel intron phylogeny supports plumage convergence. Appl. Bioinformatics 2003, 4:65-69.
-
(2003)
Appl. Bioinformatics
, vol.4
, pp. 65-69
-
-
Allen, E.A.1
Omland, K.E.2
-
2
-
-
30344483964
-
Phylogeny and classification of the avian superfamily Sylvioidea
-
Alström P., Ericson P.G.P., Olsson U., Sundberg P. Phylogeny and classification of the avian superfamily Sylvioidea. Mol. Phylogenet. Evol. 2006, 38:381-397.
-
(2006)
Mol. Phylogenet. Evol.
, vol.38
, pp. 381-397
-
-
Alström, P.1
Ericson, P.G.P.2
Olsson, U.3
Sundberg, P.4
-
3
-
-
34547094391
-
The genomic landscape of short insertion and deletion polymorphisms in the chicken (Gallus gallus) genome: a high frequency of deletions in tandem duplicates
-
Brandström M., Ellegren H. The genomic landscape of short insertion and deletion polymorphisms in the chicken (Gallus gallus) genome: a high frequency of deletions in tandem duplicates. Genetics 2007, 176:1691-1701.
-
(2007)
Genetics
, vol.176
, pp. 1691-1701
-
-
Brandström, M.1
Ellegren, H.2
-
4
-
-
33748135930
-
The RAG-1 exon in the avian order Caprimulgiformes: phylogeny, heterozygosity, and base composition
-
Barrowclough G.F., Groth J.G., Mert L.A. The RAG-1 exon in the avian order Caprimulgiformes: phylogeny, heterozygosity, and base composition. Mol. Phylogenet. Evol. 2006, 41:238-248.
-
(2006)
Mol. Phylogenet. Evol.
, vol.41
, pp. 238-248
-
-
Barrowclough, G.F.1
Groth, J.G.2
Mert, L.A.3
-
6
-
-
40649089624
-
Introns outperform exons in analyses of basal avian phylogeny using clathrin heavy chain genes
-
Chojnowski J.L., Kimball R.T., Braun E.L. Introns outperform exons in analyses of basal avian phylogeny using clathrin heavy chain genes. Gene 2008, 410:89-96.
-
(2008)
Gene
, vol.410
, pp. 89-96
-
-
Chojnowski, J.L.1
Kimball, R.T.2
Braun, E.L.3
-
7
-
-
0029168549
-
Phylogenetic re-analysis of Strauch's osteological data set for the Charadriiformes
-
Chu P.C. Phylogenetic re-analysis of Strauch's osteological data set for the Charadriiformes. Condor 1995, 97:174-196.
-
(1995)
Condor
, vol.97
, pp. 174-196
-
-
Chu, P.C.1
-
8
-
-
48249123402
-
Choosing and using introns in molecular phylogenetics
-
Creer S. Choosing and using introns in molecular phylogenetics. Evol. Bioinform. 2007, 3:99-108.
-
(2007)
Evol. Bioinform.
, vol.3
, pp. 99-108
-
-
Creer, S.1
-
9
-
-
33845472296
-
Phylogenetics, biogeography and classification of and character evolution in, gamebirds (Aves: Galliformes): effects of character exclusion, data partitioning and missing data
-
Crowe T.M., Bowie R.C.K., Bloomer P., Mandiwana T.G., Hedderson T.A.J., Randi E., Pereira S.L., Wakeling J. Phylogenetics, biogeography and classification of and character evolution in, gamebirds (Aves: Galliformes): effects of character exclusion, data partitioning and missing data. Cladistics 2006, 22:495-532.
-
(2006)
Cladistics
, vol.22
, pp. 495-532
-
-
Crowe, T.M.1
Bowie, R.C.K.2
Bloomer, P.3
Mandiwana, T.G.4
Hedderson, T.A.J.5
Randi, E.6
Pereira, S.L.7
Wakeling, J.8
-
10
-
-
23744439860
-
The evolution of the spindlin gene in birds: sequence analysis of an intron of the spindlin W and Z gene reveals four major divisions of the Psittaciformes
-
de Kloet R.S., de Kloet S.R. The evolution of the spindlin gene in birds: sequence analysis of an intron of the spindlin W and Z gene reveals four major divisions of the Psittaciformes. Mol. Phylogenet. Evol. 2005, 36:706-721.
-
(2005)
Mol. Phylogenet. Evol.
, vol.36
, pp. 706-721
-
-
de Kloet, R.S.1
de Kloet, S.R.2
-
12
-
-
34547645438
-
Molecular evolutionary genomics of birds
-
Ellegren H. Molecular evolutionary genomics of birds. Cytogenet. Genome Res. 2007, 117:120-130.
-
(2007)
Cytogenet. Genome Res.
, vol.117
, pp. 120-130
-
-
Ellegren, H.1
-
13
-
-
33845585115
-
Diversification of Neoaves: integration of molecular sequence data and fossils
-
Ericson P.G.P., Andersson C.L., Britton T., Elzanowski A., Johansson U.S., Källersjö M., Ohlson J.I., Parsons T.J., Zuccon D., Mayr G. Diversification of Neoaves: integration of molecular sequence data and fossils. Biol. Lett. 2006, 2:543-547.
-
(2006)
Biol. Lett.
, vol.2
, pp. 543-547
-
-
Ericson, P.G.P.1
Andersson, C.L.2
Britton, T.3
Elzanowski, A.4
Johansson, U.S.5
Källersjö, M.6
Ohlson, J.I.7
Parsons, T.J.8
Zuccon, D.9
Mayr, G.10
-
14
-
-
0033794386
-
Major divisions in Oscines revealed by insertions on the nuclear gene c-myc: a novel gene in avian phylogenetics
-
Ericson P.G.P., Johansson U.S., Parsons T.J. Major divisions in Oscines revealed by insertions on the nuclear gene c-myc: a novel gene in avian phylogenetics. Auk 2000, 117:1069-1078.
-
(2000)
Auk
, vol.117
, pp. 1069-1078
-
-
Ericson, P.G.P.1
Johansson, U.S.2
Parsons, T.J.3
-
15
-
-
2942532721
-
Inter-familial relationships of the shorebirds (Aves: Charadriiformes) based on nuclear DNA sequence data
-
Ericson P.G.P., Envall I., Irestedt M., Norman J.A. Inter-familial relationships of the shorebirds (Aves: Charadriiformes) based on nuclear DNA sequence data. BMC Evol. Biol. 2003, 3:16.
-
(2003)
BMC Evol. Biol.
, vol.3
, pp. 16
-
-
Ericson, P.G.P.1
Envall, I.2
Irestedt, M.3
Norman, J.A.4
-
16
-
-
9244239245
-
Parallel radiations in the primary clades of birds
-
Fain M.G., Houde P. Parallel radiations in the primary clades of birds. Evolution 2004, 58:2558-2573.
-
(2004)
Evolution
, vol.58
, pp. 2558-2573
-
-
Fain, M.G.1
Houde, P.2
-
17
-
-
33947639977
-
Multilocus perspectives on the monophyly and phylogeny of the order Charadriiformes (Aves)
-
Fain M.G., Houde P. Multilocus perspectives on the monophyly and phylogeny of the order Charadriiformes (Aves). BMC Evol. Biol. 2007, 7:35. 10.1186/1471-2148-7-35.
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 35
-
-
Fain, M.G.1
Houde, P.2
-
18
-
-
7444269014
-
Convergent evolution of strigiform and caprimulgiform dark-activity is supported by phylogenetic analysis using the arylalkylamine N-acetyltransferase (Aanat) gene
-
Fidler A.E., Kuhn S., Gwinner E. Convergent evolution of strigiform and caprimulgiform dark-activity is supported by phylogenetic analysis using the arylalkylamine N-acetyltransferase (Aanat) gene. Mol. Phylogenet. Evol. 2004, 33:908-992.
-
(2004)
Mol. Phylogenet. Evol.
, vol.33
, pp. 908-992
-
-
Fidler, A.E.1
Kuhn, S.2
Gwinner, E.3
-
19
-
-
0036006429
-
A bird's-eye view of the C-value enigma: genome size, cell size, and metabolic rate in the class Aves
-
Gregory T.R. A bird's-eye view of the C-value enigma: genome size, cell size, and metabolic rate in the class Aves. Evolution 2004, 56:121-130.
-
(2004)
Evolution
, vol.56
, pp. 121-130
-
-
Gregory, T.R.1
-
20
-
-
0346158529
-
Insertion-deletion biases and the genome size
-
Gregory T.R. Insertion-deletion biases and the genome size. Gene 2004, 324:15-34.
-
(2004)
Gene
, vol.324
, pp. 15-34
-
-
Gregory, T.R.1
-
21
-
-
80055111048
-
Basal divergences of birds and the phylogenetic utility of nuclear RAG-1 gene
-
Groth J.G., Barrowclough G.F. Basal divergences of birds and the phylogenetic utility of nuclear RAG-1 gene. Mol. Phylogenet. Evol. 1999, 10:377-390.
-
(1999)
Mol. Phylogenet. Evol.
, vol.10
, pp. 377-390
-
-
Groth, J.G.1
Barrowclough, G.F.2
-
22
-
-
46449135061
-
A phylogenomic study of birds reveals their evolutionary history
-
Hackett S.J., Kimball R.T., Reddy S., Bowie R.C.K., Braun E.L., Braun M.J., Chojnowski J.L., Cox W.A., Han K.L., Harshman J., Huddleston C.J., Marks B.D., Miglia K.J., Moore W.S., Sheldon F.H., Steadman D.W., Witt C.C., Yuri T. A phylogenomic study of birds reveals their evolutionary history. Science 2008, 320:1763-1768.
-
(2008)
Science
, vol.320
, pp. 1763-1768
-
-
Hackett, S.J.1
Kimball, R.T.2
Reddy, S.3
Bowie, R.C.K.4
Braun, E.L.5
Braun, M.J.6
Chojnowski, J.L.7
Cox, W.A.8
Han, K.L.9
Harshman, J.10
Huddleston, C.J.11
Marks, B.D.12
Miglia, K.J.13
Moore, W.S.14
Sheldon, F.H.15
Steadman, D.W.16
Witt, C.C.17
Yuri, T.18
-
23
-
-
51649095653
-
Phylogenomic evidence for multiple losses of flight in ratite birds
-
Harshman J., Braun E.L., Braun M.J., Huddleston C.J., Bowie R.C.K., Chojnowski J.L., Hackett S.J., Han K.-L., Kimball R.T., Marks B.D., Miglia K.J., Moore W.S., Reddy S., Sheldon F.H., Steadman D.W., Steppan S.J., Witt C.C., Yuri T. Phylogenomic evidence for multiple losses of flight in ratite birds. PNAS 2008, 105:13462-13467.
-
(2008)
PNAS
, vol.105
, pp. 13462-13467
-
-
Harshman, J.1
Braun, E.L.2
Braun, M.J.3
Huddleston, C.J.4
Bowie, R.C.K.5
Chojnowski, J.L.6
Hackett, S.J.7
Han, K.-L.8
Kimball, R.T.9
Marks, B.D.10
Miglia, K.J.11
Moore, W.S.12
Reddy, S.13
Sheldon, F.H.14
Steadman, D.W.15
Steppan, S.J.16
Witt, C.C.17
Yuri, T.18
-
24
-
-
0026300584
-
Ribosomal DNA: molecular evolution and phylogenetic inference
-
Hillis D.M., Dixon M.T. Ribosomal DNA: molecular evolution and phylogenetic inference. Quart. Rev. Biol. 1991, 66:411-453.
-
(1991)
Quart. Rev. Biol.
, vol.66
, pp. 411-453
-
-
Hillis, D.M.1
Dixon, M.T.2
-
25
-
-
80055120221
-
Cranes, rails, and allies (Gruiformes)
-
Oxford University Press, Oxford, S.B. Hedges, S. Kumar (Eds.)
-
Houde P. Cranes, rails, and allies (Gruiformes). The Timetree of Life 2009, 40-444. Oxford University Press, Oxford. S.B. Hedges, S. Kumar (Eds.).
-
(2009)
The Timetree of Life
, pp. 40-444
-
-
Houde, P.1
-
26
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogeny
-
Huelsenbeck J.P., Ronquist F. MRBAYES: Bayesian inference of phylogeny. Bioinformatics 2001, 17:754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
27
-
-
0036806280
-
Potential applications and pitfalls of Bayesian inference of phylogeny
-
Huelsenbeck J.P., Larget B., Miller R.E., Ronquist F. Potential applications and pitfalls of Bayesian inference of phylogeny. Syst. Biol. 2002, 51:673-678.
-
(2002)
Syst. Biol.
, vol.51
, pp. 673-678
-
-
Huelsenbeck, J.P.1
Larget, B.2
Miller, R.E.3
Ronquist, F.4
-
28
-
-
0035861456
-
Bayesian influence of phylogeny and its impact on evolutionary biology
-
Huelsenbeck J.P., Ronquist F., Nielsen R., Bollback J.P. Bayesian influence of phylogeny and its impact on evolutionary biology. Science 2001, 294:2310-2314.
-
(2001)
Science
, vol.294
, pp. 2310-2314
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
Nielsen, R.3
Bollback, J.P.4
-
29
-
-
77952096222
-
Recurrent emergence of catalytically inactive ornithine decarboxylase homologous forms that likely have regulatory function
-
Ivanov I.P., Firth A.E., Atkins J.F. Recurrent emergence of catalytically inactive ornithine decarboxylase homologous forms that likely have regulatory function. J. Mol. Evol. 2010, 70:289-302.
-
(2010)
J. Mol. Evol.
, vol.70
, pp. 289-302
-
-
Ivanov, I.P.1
Firth, A.E.2
Atkins, J.F.3
-
30
-
-
0035057830
-
Clades within the 'higher land birds', evaluated by nuclear DNA sequences
-
Johansson U.S., Parsons T.J., Irestedt M., Ericson P.G.P. Clades within the 'higher land birds', evaluated by nuclear DNA sequences. J. Zool. Syst. Evol. Res. 2001, 39:37-51.
-
(2001)
J. Zool. Syst. Evol. Res.
, vol.39
, pp. 37-51
-
-
Johansson, U.S.1
Parsons, T.J.2
Irestedt, M.3
Ericson, P.G.P.4
-
31
-
-
1542614593
-
Deletion bias in avian introns over evolutionary timescales
-
Johnson K.P. Deletion bias in avian introns over evolutionary timescales. Mol. Biol. Evol. 2004, 21:599-602.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 599-602
-
-
Johnson, K.P.1
-
32
-
-
34547583680
-
MultiPhyl: a high-throughput phylogenomics webserver using distributed computing
-
Keane T.M., Naughton T.J., McInerney O. MultiPhyl: a high-throughput phylogenomics webserver using distributed computing. Nucl. Acids Res. 2007, 35:W33-W37.
-
(2007)
Nucl. Acids Res.
, vol.35
-
-
Keane, T.M.1
Naughton, T.J.2
McInerney, O.3
-
33
-
-
0025739379
-
Simplified mammalian DNA isolation procedure
-
Laird P.W., Zijderveld A., Linders K., Rudnicki M.A., Jaenisch R., Berns A. Simplified mammalian DNA isolation procedure. Nucl. Acids Res. 1991, 19:4293.
-
(1991)
Nucl. Acids Res.
, vol.19
, pp. 4293
-
-
Laird, P.W.1
Zijderveld, A.2
Linders, K.3
Rudnicki, M.A.4
Jaenisch, R.5
Berns, A.6
-
34
-
-
0035527396
-
A likelihood approach to estimating phylogeny from discrete morphological character data
-
Lewis P.O. A likelihood approach to estimating phylogeny from discrete morphological character data. Syst. Biol. 2001, 50:913-925.
-
(2001)
Syst. Biol.
, vol.50
, pp. 913-925
-
-
Lewis, P.O.1
-
35
-
-
77958582308
-
Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion
-
Livezey B.C. Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion. Zool. J. Linn. Soc. 2010, 160:567-618.
-
(2010)
Zool. J. Linn. Soc.
, vol.160
, pp. 567-618
-
-
Livezey, B.C.1
-
36
-
-
0034949377
-
SOAP, cleaning multiple alignments from unstable blocks
-
Löytynoja A., Milinkovitch M.C. SOAP, cleaning multiple alignments from unstable blocks. Bioinformatics 2001, 17:573-574.
-
(2001)
Bioinformatics
, vol.17
, pp. 573-574
-
-
Löytynoja, A.1
Milinkovitch, M.C.2
-
37
-
-
33847644967
-
Indel evolution of mammalian introns and the utility of non-coding nuclear markers in eutherian phylogenetics
-
Matthee C.A., Eick G., Willow-Munro S., Montgelard C., Pardini A., Robinson T.J. Indel evolution of mammalian introns and the utility of non-coding nuclear markers in eutherian phylogenetics. Mol. Phylogenet. Evol. 2007, 42:827-837.
-
(2007)
Mol. Phylogenet. Evol.
, vol.42
, pp. 827-837
-
-
Matthee, C.A.1
Eick, G.2
Willow-Munro, S.3
Montgelard, C.4
Pardini, A.5
Robinson, T.J.6
-
39
-
-
78650953471
-
Metaves, Mirandornithes, Strisores and other novelties - a critical review of the higher-level phylogeny of neornithine birds
-
Mayr G. Metaves, Mirandornithes, Strisores and other novelties - a critical review of the higher-level phylogeny of neornithine birds. J. Zool. Syst. Evol. Res. 2011, 49:58-76.
-
(2011)
J. Zool. Syst. Evol. Res.
, vol.49
, pp. 58-76
-
-
Mayr, G.1
-
40
-
-
79952810164
-
The phylogeny of charadriiform birds (shorebirds and allies) - reassessing the conflict between morphology and molecules
-
Mayr G. The phylogeny of charadriiform birds (shorebirds and allies) - reassessing the conflict between morphology and molecules. Zool. J. Linn. Soc. 2011, 161:916-934.
-
(2011)
Zool. J. Linn. Soc.
, vol.161
, pp. 916-934
-
-
Mayr, G.1
-
41
-
-
22944482184
-
SeqState - primer design and sequence statistics for phylogenetic DNA data sets
-
Müller K. SeqState - primer design and sequence statistics for phylogenetic DNA data sets. Appl. Bioinformatics 2005, 4:65-69.
-
(2005)
Appl. Bioinformatics
, vol.4
, pp. 65-69
-
-
Müller, K.1
-
42
-
-
40949166237
-
Bird evolution: testing the Metaves clade with six new mitochondrial genomes
-
Morgan-Richards M., Trewick S.A., Bartosch-Härlid A., Kardailsky O., Phillips M.J., McLenachan P.A., Penny D. Bird evolution: testing the Metaves clade with six new mitochondrial genomes. BMC Evol. Biol. 2008, 23:8-20.
-
(2008)
BMC Evol. Biol.
, vol.23
, pp. 8-20
-
-
Morgan-Richards, M.1
Trewick, S.A.2
Bartosch-Härlid, A.3
Kardailsky, O.4
Phillips, M.J.5
McLenachan, P.A.6
Penny, D.7
-
43
-
-
70349697160
-
Placental mammals (Eutheria)
-
Oxford University Press, Oxford, S.B. Hedges, S. Kumar (Eds.)
-
Murphy W.J., Eizirik E. Placental mammals (Eutheria). The Timetree of Life 2009, 471-474. Oxford University Press, Oxford. S.B. Hedges, S. Kumar (Eds.).
-
(2009)
The Timetree of Life
, pp. 471-474
-
-
Murphy, W.J.1
Eizirik, E.2
-
44
-
-
34248144955
-
The mode and tempo of genome size evolution in eukaryotes
-
Oliver M.J., Petrov D., Ackerly D., Falkowski P., Schofield O.M. The mode and tempo of genome size evolution in eukaryotes. Genome Res. 2007, 17:594-601.
-
(2007)
Genome Res.
, vol.17
, pp. 594-601
-
-
Oliver, M.J.1
Petrov, D.2
Ackerly, D.3
Falkowski, P.4
Schofield, O.M.5
-
45
-
-
33947127751
-
Origin of avian genome size and structure in non-avian dinosaurs
-
Organ C.L., Shedlock A.M., Meade A., Pagel M., Edwards S.E. Origin of avian genome size and structure in non-avian dinosaurs. Nature 2007, 446:180-184.
-
(2007)
Nature
, vol.446
, pp. 180-184
-
-
Organ, C.L.1
Shedlock, A.M.2
Meade, A.3
Pagel, M.4
Edwards, S.E.5
-
46
-
-
63249116775
-
Palaeogenomics of pterosaurs and the evolution of small genome size in flying vertebrates
-
Organ C.L., Shedlock A.M. Palaeogenomics of pterosaurs and the evolution of small genome size in flying vertebrates. Biol. Lett. 2009, 5:47-50.
-
(2009)
Biol. Lett.
, vol.5
, pp. 47-50
-
-
Organ, C.L.1
Shedlock, A.M.2
-
47
-
-
0001829453
-
Nucleic acids II: the polymerase chain reaction
-
Sinauer Assoc., Sunderland, MA, D.M. Hillis, C. Moritz, B.K. Mable (Eds.)
-
Palumbi S.R. Nucleic acids II: the polymerase chain reaction. Molecular Systematics 1996, 5-221. Sinauer Assoc., Sunderland, MA. second ed. D.M. Hillis, C. Moritz, B.K. Mable (Eds.).
-
(1996)
Molecular Systematics
, pp. 5-221
-
-
Palumbi, S.R.1
-
48
-
-
1642322100
-
RAG-1 sequences resolve phylogenetic relationships within charadriiform birds
-
Paton T.A., Baker A.J., Groth J.G., Barrowclough G.F. RAG-1 sequences resolve phylogenetic relationships within charadriiform birds. Mol. Phylogenet. Evol. 2003, 29:268-278.
-
(2003)
Mol. Phylogenet. Evol.
, vol.29
, pp. 268-278
-
-
Paton, T.A.1
Baker, A.J.2
Groth, J.G.3
Barrowclough, G.F.4
-
49
-
-
0031255043
-
The utility of DNA sequences of an intron from the β-fibrinogen gene in phylogenetic analysis of woodpeckers (Aves: Picidae)
-
Prychitko T.M., Moore W.S. The utility of DNA sequences of an intron from the β-fibrinogen gene in phylogenetic analysis of woodpeckers (Aves: Picidae). Mol. Phylogenet. Evol. 1997, 8:193-204.
-
(1997)
Mol. Phylogenet. Evol.
, vol.8
, pp. 193-204
-
-
Prychitko, T.M.1
Moore, W.S.2
-
50
-
-
0038370222
-
Alignment and phylogenetic analysis of beta-fibrinogen intron 7 sequences among avian orders reveal conserved regions within the intron
-
Prychitko T.M., Moore W.S. Alignment and phylogenetic analysis of beta-fibrinogen intron 7 sequences among avian orders reveal conserved regions within the intron. Mol. Biol. Evol. 2003, 20:762-771.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 762-771
-
-
Prychitko, T.M.1
Moore, W.S.2
-
51
-
-
80055114990
-
-
2007. Tracer. MCMC Trace Analysis Tool. Version v1.4.
-
Rambaut, A., Drummond, A.J., 2003-2007. Tracer. MCMC Trace Analysis Tool. Version v1.4.
-
(2003)
-
-
Rambaut, A.1
Drummond, A.J.2
-
52
-
-
33751213606
-
4SALE - a tool for synchronous RNA sequence and secondary structure alignment and editing
-
Seibel P.N., Müller T., Dandekar T., Schultz J., Wolf M. 4SALE - a tool for synchronous RNA sequence and secondary structure alignment and editing. BMC Bioinformatics 2006, 7:498.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 498
-
-
Seibel, P.N.1
Müller, T.2
Dandekar, T.3
Schultz, J.4
Wolf, M.5
-
53
-
-
0034002673
-
Relative patterns and rates of evolution in heron nuclear and mitochondrial DNA
-
Sheldon F.H., Jones C.E., McCracken K.G. Relative patterns and rates of evolution in heron nuclear and mitochondrial DNA. Mol. Biol. Evol. 2000, 17:437-450.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 437-450
-
-
Sheldon, F.H.1
Jones, C.E.2
McCracken, K.G.3
-
54
-
-
34447280568
-
The relative performance of indel-coding methods in simulations
-
Simmons M.P., Mueller K., Norton A.P. The relative performance of indel-coding methods in simulations. Mol. Phylogenet. Evol. 2007, 44:724-740.
-
(2007)
Mol. Phylogenet. Evol.
, vol.44
, pp. 724-740
-
-
Simmons, M.P.1
Mueller, K.2
Norton, A.P.3
-
55
-
-
0034350427
-
Gaps as characters in sequence-based phylogenetic analyses
-
Simmons M.P., Ochoterena H. Gaps as characters in sequence-based phylogenetic analyses. Syst. Biol. 2000, 49:369-381.
-
(2000)
Syst. Biol.
, vol.49
, pp. 369-381
-
-
Simmons, M.P.1
Ochoterena, H.2
-
56
-
-
0035527375
-
Incorporation, relative homoplasy, and effect of gap characters in sequence-based phylogenetic analyses
-
Simmons M.P., Ochoterena H., Carr T.G. Incorporation, relative homoplasy, and effect of gap characters in sequence-based phylogenetic analyses. Syst. Biol. 2001, 50:454-462.
-
(2001)
Syst. Biol.
, vol.50
, pp. 454-462
-
-
Simmons, M.P.1
Ochoterena, H.2
Carr, T.G.3
-
57
-
-
0036219405
-
Rapid, independent evolution of flightlessness in four species of Pacific rails (Rallidae): an analysis based on mitochondrial sequence data
-
Slikas B., Olson S.L., Fleischer R.C. Rapid, independent evolution of flightlessness in four species of Pacific rails (Rallidae): an analysis based on mitochondrial sequence data. J. Avian Biol. 2002, 33:5-14.
-
(2002)
J. Avian Biol.
, vol.33
, pp. 5-14
-
-
Slikas, B.1
Olson, S.L.2
Fleischer, R.C.3
-
58
-
-
67649099727
-
The genome sizes of megabats (Chiroptera: Pteropodidae) are remarkably constrained
-
Smith J.D.L., Gregory T.R. The genome sizes of megabats (Chiroptera: Pteropodidae) are remarkably constrained. Biol. Lett. 2009, 5:347-351.
-
(2009)
Biol. Lett.
, vol.5
, pp. 347-351
-
-
Smith, J.D.L.1
Gregory, T.R.2
-
59
-
-
0842309555
-
Molecular phylogeny of songbirds (Passeriformes) inferred from mitochondrial 16S ribosomal RNA gene sequences
-
Spicer G.S., Dunipace L. Molecular phylogeny of songbirds (Passeriformes) inferred from mitochondrial 16S ribosomal RNA gene sequences. Mol. Phylogenet. Evol. 2004, 30:325-335.
-
(2004)
Mol. Phylogenet. Evol.
, vol.30
, pp. 325-335
-
-
Spicer, G.S.1
Dunipace, L.2
-
60
-
-
51849143838
-
A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution
-
Stapley J., Birkhead T.R., Burke T., Slate J. A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution. Genetics 2008, 179:651-667.
-
(2008)
Genetics
, vol.179
, pp. 651-667
-
-
Stapley, J.1
Birkhead, T.R.2
Burke, T.3
Slate, J.4
-
61
-
-
80055116032
-
-
StatSoft. STATISTICA (data analysis software system), version 8. StatSoft, Tulsa, OK, USA.
-
StatSoft, 2008. STATISTICA (data analysis software system), version 8. StatSoft, Tulsa, OK, USA.
-
(2008)
-
-
-
62
-
-
51349155028
-
Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes
-
Tian D., Wang Q., Zhang P., Araki H., Yang S., Kreitman M., Nagylaki T., Hudson R., Bergelson J., Chen J.-Q. Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes. Nature 2008, 455:105-108.
-
(2008)
Nature
, vol.455
, pp. 105-108
-
-
Tian, D.1
Wang, Q.2
Zhang, P.3
Araki, H.4
Yang, S.5
Kreitman, M.6
Nagylaki, T.7
Hudson, R.8
Bergelson, J.9
Chen, J.-Q.10
-
63
-
-
72649104737
-
Birds (Aves)
-
Oxford University Press, Oxford, S.B. Hedges, S. Kumar (Eds.)
-
van Tuinen M. Birds (Aves). The Timetree of Life 2009, 9-411. Oxford University Press, Oxford. S.B. Hedges, S. Kumar (Eds.).
-
(2009)
The Timetree of Life
, pp. 9-411
-
-
van Tuinen, M.1
-
64
-
-
33847278894
-
Long-term trends in evolution of indels in protein sequences
-
Wolf Y., Madej T., Babenko V., Shoemaker B., Panchenko A.R. Long-term trends in evolution of indels in protein sequences. BMC Evol. Biol. 2007, 7:19.
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 19
-
-
Wolf, Y.1
Madej, T.2
Babenko, V.3
Shoemaker, B.4
Panchenko, A.R.5
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