-
1
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies, M., Egholm, M., Altman, W. E., et al. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature. 437, 376–380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
-
2
-
-
55549089660
-
Accurate whole human genome sequencing using reversible terminator chemistry
-
Bentley, D. R., Balasubramanian, S., Swerdlow, H. P., et al. (2008) Accurate whole human genome sequencing using reversible terminator chemistry. Nature. 456, 53–59.
-
(2008)
Nature
, vol.456
, pp. 53-59
-
-
Bentley, D.R.1
Balasubramanian, S.2
Swerdlow, H.P.3
-
3
-
-
24644462173
-
Accurate multiplex polony sequencing of an evolved bacterial genome
-
Shendure, J., Porreca, G. J., Reppas, N. B., et al. (2005) Accurate multiplex polony sequencing of an evolved bacterial genome. Science. 309, 1728–1732.
-
(2005)
Science
, vol.309
, pp. 1728-1732
-
-
Shendure, J.1
Porreca, G.J.2
Reppas, N.B.3
-
4
-
-
77249137168
-
Principles and challenges of genome-wide DNA methylation analysis
-
Laird, P. W. (2010) Principles and challenges of genome-wide DNA methylation analysis. Nat Rev Genet. 11, 191–203.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 191-203
-
-
Laird, P.W.1
-
5
-
-
37548999369
-
Computational epigenetics
-
Bock, C., Lengauer, T. (2008) Computational epigenetics. Bioinformatics. 24, 1–10.
-
(2008)
Bioinformatics
, vol.24
, pp. 1-10
-
-
Bock, C.1
Lengauer, T.2
-
6
-
-
55549097836
-
Mapping short DNA sequencing reads and calling variants using mapping quality scores
-
Li, H., Ruan, J., Durbin, R. (2008) Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome research. 18, 1851–1858.
-
(2008)
Genome Research
, vol.18
, pp. 1851-1858
-
-
Li, H.1
Ruan, J.2
Durbin, R.3
-
7
-
-
67649132826
-
An improved method for genome wide DNA methylation profiling correlated to transcription and genomic instability in two breast cancer cell lines
-
Li, J., Gao, F., Li, N., et al. (2009) An improved method for genome wide DNA methylation profiling correlated to transcription and genomic instability in two breast cancer cell lines. BMC Genomics. 10, 223.
-
(2009)
BMC Genomics
, vol.10
, pp. 223
-
-
Li, J.1
Gao, F.2
Li, N.3
-
8
-
-
53549106933
-
A combination of LongSAGE with Solexa sequencing is well suited to explore the depth and the complexity of transcriptome
-
Hanriot, L., Keime, C., Gay, N., et al. (2008) A combination of LongSAGE with Solexa sequencing is well suited to explore the depth and the complexity of transcriptome. BMC Genomics. 9, 418.
-
(2008)
BMC Genomics
, vol.9
-
-
Hanriot, L.1
Keime, C.2
Gay, N.3
-
10
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski, A., Cuddapah, S., Cui, K., et al. (2007) High-resolution profiling of histone methylations in the human genome. Cell. 129, 823–837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
-
11
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen, T. S., Ku, M., Jaffe, D. B., et al. (2007) Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature. 448, 553–560.
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
-
12
-
-
42749087226
-
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
-
Lister, R., O’Malley, R. C., Tonti-Filippini, J., et al. (2008) Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell. 133, 523–536.
-
(2008)
Cell
, vol.133
, pp. 523-536
-
-
Lister, R.1
O’Malley, R.C.2
Tonti-Filippini, J.3
-
13
-
-
59749105927
-
Genome-wide high throughput analysis of DNA methylation in eukaryotes
-
Pomraning, K. R., Smith, K. M., Freitag, M. (2009) Genome-wide high throughput analysis of DNA methylation in eukaryotes. Methods. 47, 142–150.
-
(2009)
Methods
, vol.47
, pp. 142-150
-
-
Pomraning, K.R.1
Smith, K.M.2
Freitag, M.3
-
14
-
-
1842832338
-
Transforming growth factor-beta receptors interact with AP2 by direct binding to beta2 subunit
-
Yao, D., Ehrlich, M., Henis, Y. I., Leof, E. B. (2002) Transforming growth factor-beta receptors interact with AP2 by direct binding to beta2 subunit. Mol Biol Cell. 13, 4001–4012.
-
(2002)
Mol Biol Cell
, vol.13
, pp. 4001-4012
-
-
Yao, D.1
Ehrlich, M.2
Henis, Y.I.3
Leof, E.B.4
-
15
-
-
70450217879
-
Human DNA methylomes at base resolution show widespread epigenomic differences
-
Lister, R., Pelizzola, M., Dowen, R. H., et al. (2009) Human DNA methylomes at base resolution show widespread epigenomic differences. Nature. 462, 315–322.
-
(2009)
Nature
, vol.462
, pp. 315-322
-
-
Lister, R.1
Pelizzola, M.2
Dowen, R.H.3
-
16
-
-
0037068353
-
DNA methylation in cancer: Too much, but also too little
-
Ehrlich, M. (2002) DNA methylation in cancer: too much, but also too little. Oncogene. 21, 5400–5413.
-
(2002)
Oncogene
, vol.21
, pp. 5400-5413
-
-
Ehrlich, M.1
-
17
-
-
0142058060
-
The University of Vienna experience in heart transplantation
-
Zuckermann, A., Bohdjalian, A., Deviatko, E., et al. (2002) The University of Vienna experience in heart transplantation. Clin Transpl. 229–242.
-
(2002)
Clin Transpl
, pp. 229-242
-
-
Zuckermann, A.1
Bohdjalian, A.2
Deviatko, E.3
-
19
-
-
46249117780
-
Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation
-
Kerkel, K., Spadola, A., Yuan, E., et al. (2008) Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation. Nat Genet. 40, 904–908.
-
(2008)
Nat Genet
, vol.40
, pp. 904-908
-
-
Kerkel, K.1
Spadola, A.2
Yuan, E.3
-
20
-
-
51349105905
-
Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line
-
Gal-Yam, E. N., Egger, G., Iniguez, L., et al. (2008) Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line. Proc Natl Acad Sci U S A. 105, 12979–12984.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 12979-12984
-
-
Gal-Yam, E.N.1
Egger, G.2
Iniguez, L.3
-
21
-
-
67651149735
-
High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbers
-
Oda, M., Glass, J. L., Thompson, R. F., et al. (2009) High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbers. Nucleic Acids Res. 37, 3829–3839.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 3829-3839
-
-
Oda, M.1
Glass, J.L.2
Thompson, R.F.3
-
22
-
-
0001677717
-
Controlling the False Discovery Rate-a Practical and Powerful Approach to Multiple Testing
-
Benjamini, Y., Hochberg, Y. (1995) Controlling the False Discovery Rate-a Practical and Powerful Approach to Multiple Testing. J Roy Stat Soc B Met. 57, 289–300.
-
(1995)
J Roy Stat Soc B Met
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
23
-
-
34250322116
-
Integrated analysis of experimental data sets reveals many novel promoters in 1% of the human genome
-
Trinklein, N. D., Karaoz, U., Wu, J., et al. (2007) Integrated analysis of experimental data sets reveals many novel promoters in 1% of the human genome. Genome Res. 17, 720–731.
-
(2007)
Genome Res
, vol.17
, pp. 720-731
-
-
Trinklein, N.D.1
Karaoz, U.2
Wu, J.3
-
24
-
-
0023216891
-
CpG islands in vertebrate genomes
-
Gardiner-Garden, M., Frommer, M. (1987) CpG islands in vertebrate genomes. J Mol Biol. 196, 261–282.
-
(1987)
J Mol Biol
, vol.196
, pp. 261-282
-
-
Gardiner-Garden, M.1
Frommer, M.2
-
25
-
-
72849117741
-
A species-generalized probabilistic model-based definition of CpG islands
-
Irizarry, R. A., Wu, H., Feinberg, A. P. (2009) A species-generalized probabilistic model-based definition of CpG islands. Mamm Genome. 20, 674–680.
-
(2009)
Mamm Genome
, vol.20
, pp. 674-680
-
-
Irizarry, R.A.1
Wu, H.2
Feinberg, A.P.3
|